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PDB: 1813 results

4O65
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BU of 4o65 by Molmil
Crystal structure of the cupredoxin domain of amoB from Nitrosocaldus yellowstonii
Descriptor: COPPER (II) ION, Putative archaeal ammonia monooxygenase subunit B, SULFATE ION
Authors:Lawton, T.J, Ham, J, Sun, T, Rosenzweig, A.C.
Deposit date:2013-12-20
Release date:2014-04-02
Last modified:2014-11-12
Method:X-RAY DIFFRACTION (1.796 Å)
Cite:Structural conservation of the B subunit in the ammonia monooxygenase/particulate methane monooxygenase superfamily.
Proteins, 82, 2014
7M4M
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BU of 7m4m by Molmil
Crystal structure of RBR E3 ligase RNF216 with ubiquitin
Descriptor: E3 ubiquitin-protein ligase RNF216, GLYCEROL, Ubiquitin, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
7M4N
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BU of 7m4n by Molmil
Crystal structure of RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin
Descriptor: E3 ubiquitin-protein ligase RNF216, GLYCEROL, SULFATE ION, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
7M4O
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BU of 7m4o by Molmil
Crystal structure of phosphorylated RBR E3 ligase RNF216 in complex with K63-linked di-ubiquitin
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, E3 ubiquitin-protein ligase RNF216, GLYCEROL, ...
Authors:Cotton, T.R, Lechtenberg, B.C.
Deposit date:2021-03-21
Release date:2022-01-05
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structural basis of K63-ubiquitin chain formation by the Gordon-Holmes syndrome RBR E3 ubiquitin ligase RNF216.
Mol.Cell, 82, 2022
4F5J
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BU of 4f5j by Molmil
Rational Design and Directed Evolution for Conversion of Substrate Specificity from E.coli Aspartate Aminotransferase to Tyrosine Aminotransferase: Mutant P5.
Descriptor: Aspartate aminotransferase
Authors:Addington, T.A, Fisher, A.J, Toney, M.D.
Deposit date:2012-05-13
Release date:2013-02-13
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.954 Å)
Cite:Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5F
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BU of 4f5f by Molmil
Structure of Aspartate Aminotransferase Conversion to Tyrosine Aminotransferase: Chimera P1.
Descriptor: Aspartate aminotransferase
Authors:Addington, T.A, Fisher, A.J, Toney, M.D.
Deposit date:2012-05-13
Release date:2013-02-13
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5M
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BU of 4f5m by Molmil
Wild-Type E. coli Aspartate Aminotransferase: A Template For The Interconversion of Substrate Specificity and Activity To Tyrosine Aminotransferase By The JANUS Algorithm.
Descriptor: 1,2-ETHANEDIOL, Aspartate aminotransferase
Authors:Addington, T.A, Fisher, A.J, Toney, M.D.
Deposit date:2012-05-13
Release date:2013-02-13
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5I
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BU of 4f5i by Molmil
Substrate Specificity Conversion of E. coli Pyridoxal-5'-Phosphate Dependent Aspartate Aminotransferase to Tyrosine Aminotransferase: Chimera P4.
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Aspartate aminotransferase
Authors:Addington, T.A, Fisher, A.J, Toney, M.D.
Deposit date:2012-05-13
Release date:2013-02-13
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
4F5H
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BU of 4f5h by Molmil
Intercoversion of Substrate Specificity: E. coli Aspatate Aminotransferase to Tyrosine Aminotransferase: Chimera P3.
Descriptor: Aspartate aminotransferase
Authors:Addington, T.A, Fisher, A.J, Toney, M.D.
Deposit date:2012-05-13
Release date:2013-02-13
Last modified:2013-04-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Janus: prediction and ranking of mutations required for functional interconversion of enzymes.
J.Mol.Biol., 425, 2013
8XXA
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BU of 8xxa by Molmil
Rhodothermus marinus alpha-amylase RmGH13_47A CBM48-A-B-C domains in complex with branched pentasaccharide
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Tonozuka, T.
Deposit date:2024-01-18
Release date:2024-02-07
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the recognition of alpha-1,6-branched alpha-glucan by GH13_47 alpha-amylase from Rhodothermus marinus
Proteins, 2024
8XX9
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BU of 8xx9 by Molmil
Rhodothermus marinus alpha-amylase RmGH13_47A CBM48-A-B-C domains
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Tonozuka, T.
Deposit date:2024-01-18
Release date:2024-02-07
Last modified:2024-04-24
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural basis for the recognition of alpha-1,6-branched alpha-glucan by GH13_47 alpha-amylase from Rhodothermus marinus
Proteins, 2024
8EB0
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BU of 8eb0 by Molmil
RNF216/E2-Ub/Ub transthiolation complex
Descriptor: E3 ubiquitin-protein ligase RNF216, SULFATE ION, Ubiquitin, ...
Authors:Cotton, T.R, Wang, X.S, Lechtenberg, B.C.
Deposit date:2022-08-30
Release date:2023-01-18
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:The unifying catalytic mechanism of the RING-between-RING E3 ubiquitin ligase family.
Nat Commun, 14, 2023
6XK9
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BU of 6xk9 by Molmil
Cereblon in complex with DDB1, CC-90009, and GSPT1
Descriptor: 2-(4-chlorophenyl)-N-({2-[(3S)-2,6-dioxopiperidin-3-yl]-1-oxo-2,3-dihydro-1H-isoindol-5-yl}methyl)-2,2-difluoroacetamide, DNA damage-binding protein 1, Eukaryotic peptide chain release factor GTP-binding subunit ERF3A, ...
Authors:Clayton, T.L, Tran, E.T, Zhu, J, Pagarigan, B.E, Matyskiela, M.E, Chamberlain, P.P.
Deposit date:2020-06-25
Release date:2020-12-02
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.64 Å)
Cite:CC-90009, a novel cereblon E3 ligase modulator, targets acute myeloid leukemia blasts and leukemia stem cells.
Blood, 137, 2021
4R0R
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BU of 4r0r by Molmil
Ebolavirus GP Prehairpin Intermediate Mimic
Descriptor: eboIZN21
Authors:Clinton, T.R, Weinstock, M.T, Jacobsen, M.T, Szabo-Fresnais, N, Pandya, M.J, Whitby, F.G, Herbert, A.S, Prugar, L.I, McKinnon, R, Hill, C.P, Welch, B.D, Dye, J.M, Eckert, D.M, Kay, M.S.
Deposit date:2014-08-01
Release date:2014-10-22
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Design and characterization of ebolavirus GP prehairpin intermediate mimics as drug targets.
Protein Sci., 24, 2015
6NYR
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BU of 6nyr by Molmil
The crystal structure of CroV588 a novel circular LRR protein structure
Descriptor: Crov588, GLYCEROL
Authors:Huyton, T, Jaiswal, M, Gorlich, D.
Deposit date:2019-02-12
Release date:2020-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.431 Å)
Cite:The crystal structure of CroV588 a novel circular LRR protein structure
To Be Published
6NYS
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BU of 6nys by Molmil
The crystal structure of CroV588 a novel circular LRR protein structure
Descriptor: 6-tungstotellurate(VI), crov588
Authors:Huyton, T, Jaiswal, M, Gorlich, D.
Deposit date:2019-02-12
Release date:2020-08-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:The crystal structure of CroV588 a novel circular LRR protein structure
To Be Published
8FEI
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BU of 8fei by Molmil
CryoEM structure of Conalbumin from chicken egg white (sigma-Cas 1391-06-6)
Descriptor: FE (III) ION, Ovotransferrin
Authors:Newton, T.P, Zimanyi, C, Kopylov, M.
Deposit date:2022-12-06
Release date:2023-02-08
Method:ELECTRON MICROSCOPY (3 Å)
Cite:CryoEM structure of Conalbumin from chicken egg white (sigma-Cas 1391-06-6)
To Be Published
8FEH
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BU of 8feh by Molmil
CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker
Descriptor: Minor capsid protein A1 fusion
Authors:Newton, T.P, Zhao, L, Finn, M.G, Kopylov, M.
Deposit date:2022-12-06
Release date:2023-12-20
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:CryoEM structure of bacteriophage Q-beta coat protein dimer with AYGG linker
To Be Published
6M0D
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BU of 6m0d by Molmil
Beijerinckia indica beta-fructosyltransferase
Descriptor: Levansucrase, MAGNESIUM ION
Authors:Tonozuka, T.
Deposit date:2020-02-21
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a glycoside hydrolase family 68 beta-fructosyltransferase from Beijerinckia indica subsp. indica in complex with fructose.
Biosci.Biotechnol.Biochem., 84, 2020
6M0E
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BU of 6m0e by Molmil
Beijerinckia indica beta-fructosyltransferase complexed with fructose
Descriptor: Levansucrase, MAGNESIUM ION, beta-D-fructofuranose, ...
Authors:Tonozuka, T.
Deposit date:2020-02-21
Release date:2020-08-12
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Crystal structure of a glycoside hydrolase family 68 beta-fructosyltransferase from Beijerinckia indica subsp. indica in complex with fructose.
Biosci.Biotechnol.Biochem., 84, 2020
5NTU
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BU of 5ntu by Molmil
Crystal Structure of human Pro-myostatin Precursor at 2.6 A Resolution
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, Growth/differentiation factor 8
Authors:Cotton, T.R, Fischer, G, Hyvonen, M.
Deposit date:2017-04-28
Release date:2018-01-17
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Structure of the human myostatin precursor and determinants of growth factor latency.
EMBO J., 37, 2018
5NXS
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BU of 5nxs by Molmil
Crystal Structure of Human Pro-myostatin Precursor at 4.2 A Resolution with Experimental Phases from SeMet labelling
Descriptor: Growth/differentiation factor 8
Authors:Cotton, T.R, Fischer, G, Hyvonen, M.
Deposit date:2017-05-10
Release date:2018-01-17
Last modified:2018-02-21
Method:X-RAY DIFFRACTION (4.19 Å)
Cite:Structure of the human myostatin precursor and determinants of growth factor latency.
EMBO J., 37, 2018
4L6P
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BU of 4l6p by Molmil
Structure of C22Y Mutant PCNA protein defective in DNA mismatch repair
Descriptor: GLYCEROL, Proliferating cell nuclear antigen
Authors:Washington, T, Boehm, E.
Deposit date:2013-06-12
Release date:2014-10-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Distinct structural alterations in proliferating cell nuclear antigen block DNA mismatch repair.
Biochemistry, 52, 2013
4L60
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BU of 4l60 by Molmil
Structure of C81R Mutant PCNA Protein Defective in Mismatch Repair
Descriptor: Proliferating cell nuclear antigen
Authors:Washington, T, Boehm, E.
Deposit date:2013-06-11
Release date:2013-10-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Distinct structural alterations in proliferating cell nuclear antigen block DNA mismatch repair.
Biochemistry, 52, 2013
5MSE
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BU of 5mse by Molmil
GFP nuclear transport receptor mimic 3B8
Descriptor: Green fluorescent protein, IMIDAZOLE, SODIUM ION
Authors:Huyton, T, Gorlich, D.
Deposit date:2017-01-04
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Surface Properties Determining Passage Rates of Proteins through Nuclear Pores.
Cell, 174, 2018

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