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PDB: 89 results

8FCY
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BU of 8fcy by Molmil
Engineered human dynein motor domain in microtubule-bound state
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-01
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FDT
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BU of 8fdt by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FD6
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BU of 8fd6 by Molmil
Engineered human dynein motor domain in the microtubule-unbound state in the buffer containing ATP-Vi
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, ...
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-02
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
8FDU
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BU of 8fdu by Molmil
Engineered human dynein motor domain in the microtubule-unbound state with LIS1 complex in the buffer containing ATP-Vi (local refined on AAA3-AAA5 and LIS1)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Cytoplasmic dynein 1 heavy chain 1,Serine--tRNA ligase, Platelet-activating factor acetylhydrolase IB subunit beta,Platelet-activating factor acetylhydrolase IB subunit beta,human LIS1 protein with a SNAP tag
Authors:Ton, W, Wang, Y, Chai, P.
Deposit date:2022-12-04
Release date:2023-06-21
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Microtubule-binding-induced allostery triggers LIS1 dissociation from dynein prior to cargo transport.
Nat.Struct.Mol.Biol., 30, 2023
6NCZ
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BU of 6ncz by Molmil
Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans bound to phenyl-thio-beta-D-glucuronide
Descriptor: Beta-glucuronidase, GLYCEROL, phenyl 1-thio-beta-D-glucopyranosiduronic acid
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6NCX
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BU of 6ncx by Molmil
Crystal structure of GH2 beta-galacturonidase from Eisenbergiella tayi bound to galacturonate
Descriptor: Beta-galacturonidase, CHLORIDE ION, alpha-D-galactopyranuronic acid
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6NCY
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BU of 6ncy by Molmil
Crystal structure of hybrid beta-glucuronidase/beta-galacturonidase from Fusicatenibacter saccharivorans
Descriptor: Beta-glucuronidase, GLYCEROL, NICKEL (II) ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6NCW
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BU of 6ncw by Molmil
Crystal structure of a GH2 beta-galacturonidase from Eisenbergiella tayi bound to glycerol
Descriptor: Beta-galacturonidase, CHLORIDE ION, GLYCEROL
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-12-12
Release date:2019-02-20
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Selecting a Single Stereocenter: The Molecular Nuances That Differentiate beta-Hexuronidases in the Human Gut Microbiome.
Biochemistry, 58, 2019
6D6W
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BU of 6d6w by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to glucuronate
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-23
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D7F
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BU of 6d7f by Molmil
Bacteroides uniformis beta-glucuronidase 1 bound to thiophenyl-beta-D-glucuronide
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-24
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D89
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BU of 6d89 by Molmil
Bacteroides uniformis beta-glucuronidase 1 with N-terminal loop deletion
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, CITRIC ACID
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
7KFQ
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BU of 7kfq by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to 1H-Indole-3-Carboxylic Acid
Descriptor: 1H-INDOLE-3-CARBOXYLIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-14
Release date:2021-11-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KFS
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BU of 7kfs by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Benzoic Acid
Descriptor: BENZOIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-14
Release date:2021-11-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KYM
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BU of 7kym by Molmil
Crystal structure of the MarR family transcriptional regulator from Bradyrhizobium japonicum
Descriptor: MarR family transcriptional regulator, PHOSPHATE ION
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-12-08
Release date:2021-12-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
6D8K
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BU of 6d8k by Molmil
Bacteroides multiple species beta-glucuronidase
Descriptor: Glycosyl hydrolase family 2, sugar binding domain protein
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-26
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
7L1I
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BU of 7l1i by Molmil
Crystal structure of the MarR family transcriptional regulator from Acineotobacter baumannii bound to Indole 3 acetic acid
Descriptor: 1H-INDOL-3-YLACETIC ACID, MarR family multidrug resistance pump transcriptional regulator, NICKEL (II) ION
Authors:Walton, W.G, Lietzan, A.D, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-12-14
Release date:2022-02-09
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KH3
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BU of 7kh3 by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Indole 3 propionic acid
Descriptor: INDOLYLPROPIONIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-19
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KJL
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BU of 7kjl by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Salicylic acid
Descriptor: 2-HYDROXYBENZOIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-26
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KJQ
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BU of 7kjq by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Picloram
Descriptor: Picloram, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-26
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KK0
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BU of 7kk0 by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Catechol
Descriptor: CATECHOL, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-27
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
7KIG
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BU of 7kig by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Indole-3-butyric acid
Descriptor: 3-INDOLEBUTYRIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-23
Release date:2021-12-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
6D41
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BU of 6d41 by Molmil
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-17
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
6D50
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BU of 6d50 by Molmil
Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone
Descriptor: (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid, CALCIUM ION, Glycosyl hydrolases family 2, ...
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-19
Release date:2018-10-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018
7KFO
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BU of 7kfo by Molmil
Crystal structure of the MarR family transcriptional regulator from Variovorax paradoxus bound to Indole 3 acetic acid
Descriptor: 1H-INDOL-3-YLACETIC ACID, SULFATE ION, Transcriptional regulator, ...
Authors:Walton, W.G, Redinbo, M.R, Dangl, J.L.
Deposit date:2020-10-14
Release date:2021-11-10
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Diverse MarR bacterial regulators of auxin catabolism in the plant microbiome.
Nat Microbiol, 7, 2022
6D1N
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BU of 6d1n by Molmil
Apo structure of Bacteroides uniformis Beta-glucuronidase 1
Descriptor: Beta-galactosidase/beta-glucuronidase, CHLORIDE ION, GLYCEROL
Authors:Walton, W.G, Pellock, S.J, Redinbo, M.R.
Deposit date:2018-04-12
Release date:2018-10-17
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three structurally and functionally distinct beta-glucuronidases from the human gut microbeBacteroides uniformis.
J. Biol. Chem., 293, 2018

 

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