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PDB: 60 results

7JUM
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Pfs230 D1 domain in complex with neutralizing antibody LMIV230-01
Descriptor: Gametocyte surface protein P230, Neutralizing antibody, LMIV230-01 Single-chain Fv
Authors:Tolia, N, Tang, W.K.
Deposit date:2020-08-20
Release date:2021-03-31
Last modified:2021-04-07
Method:X-RAY DIFFRACTION (1.998 Å)
Cite:A human monoclonal antibody blocks malaria transmission and defines a highly conserved neutralizing epitope on gametes.
Nat Commun, 12, 2021
3RRC
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BU of 3rrc by Molmil
Crystal Structure of Region II from Plasmodium vivax Duffy Binding Protein
Descriptor: 1,2-ETHANEDIOL, Duffy receptor, PHOSPHATE ION
Authors:Tolia, N.H.
Deposit date:2011-04-29
Release date:2011-07-13
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Dimerization of Plasmodium vivax DBP is induced upon receptor binding and drives recognition of DARC.
Nat.Struct.Mol.Biol., 18, 2011
7K3Z
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BU of 7k3z by Molmil
P. falciparum Cpn60 D474A mutant bound to ATP
Descriptor: 60 kDa chaperonin, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Tolia, N.H, Shi, D, Nguyen, B.
Deposit date:2020-09-14
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.69 Å)
Cite:Crystal structure of P. falciparum Cpn60 bound to ATP reveals an open dynamic conformation before substrate binding.
Sci Rep, 11, 2021
4NUV
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BU of 4nuv by Molmil
Heterotetramer structure of Region II from Plasmodium vivax Duffy Binding Protein (PvDBP) bound to the ectodomain of the Duffy Antigen Receptor for Chemokines (DARC)
Descriptor: Duffy antigen/chemokine receptor, Duffy receptor, GLYCEROL
Authors:Tolia, N.H.
Deposit date:2013-12-04
Release date:2014-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Red Blood Cell Invasion by Plasmodium vivax: Structural Basis for DBP Engagement of DARC.
Plos Pathog., 10, 2014
4QJB
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BU of 4qjb by Molmil
Crystal structure of the sugar phosphatase PfHAD1 from Plasmodium falciparum
Descriptor: CHLORIDE ION, Haloacid dehalogenase-like hydrolase, MAGNESIUM ION
Authors:Tolia, N.H, Park, J.
Deposit date:2014-06-03
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:A sugar phosphatase regulates the methylerythritol phosphate (MEP) pathway in malaria parasites.
Nat Commun, 5, 2014
4JNO
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Crystal structure of Plasmodium falciparum Erythrocyte Binding Antigen 140 (PfEBA-140/BAEBL) Region II in complex with sialyllactose
Descriptor: BAEBL protein, N-acetyl-alpha-neuraminic acid
Authors:Tolia, N.H.
Deposit date:2013-03-15
Release date:2013-03-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Molecular Basis for Sialic Acid-dependent Receptor Recognition by the Plasmodium falciparum Invasion Protein Erythrocyte-binding Antigen-140/BAEBL.
J.Biol.Chem., 288, 2013
4NUU
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BU of 4nuu by Molmil
Heterotrimer structure of Region II from Plasmodium vivax Duffy Binding Protein (PvDBP) bound to the ectodomain of the Duffy Antigen Receptor for Chemokines (DARC)
Descriptor: Duffy antigen/chemokine receptor, Duffy receptor
Authors:Tolia, N.H.
Deposit date:2013-12-04
Release date:2014-02-05
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Red Blood Cell Invasion by Plasmodium vivax: Structural Basis for DBP Engagement of DARC.
Plos Pathog., 10, 2014
4K2U
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BU of 4k2u by Molmil
Crystal structure of PfEBA-175 F1 in complex with R218 antibody Fab fragment
Descriptor: Antibody Heavy Chain, Antibody Light Chain, Erythrocyte binding antigen 175, ...
Authors:Tolia, N.H.
Deposit date:2013-04-09
Release date:2013-06-12
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structural and Functional Basis for Inhibition of Erythrocyte Invasion by Antibodies that Target Plasmodium falciparum EBA-175.
Plos Pathog., 9, 2013
1ZRO
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BU of 1zro by Molmil
Crystal structure of EBA-175 Region II (RII) crystallized in the presence of (alpha)2,3-sialyllactose
Descriptor: CHLORIDE ION, SULFATE ION, erythrocyte binding antigen region II
Authors:Tolia, N.H, Enemark, E.J, Sim, B.K, Joshua-Tor, L.
Deposit date:2005-05-19
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural Basis for the EBA-175 Erythrocyte Invasion Pathway of the Malaria Parasite Plasmodium falciparum.
Cell(Cambridge,Mass.), 122, 2005
1ZRL
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Crystal structure of EBA-175 Region II (RII)
Descriptor: CHLORIDE ION, SULFATE ION, erythrocyte binding antigen region II
Authors:Tolia, N.H, Enemark, E.J, Sim, B.K, Joshua-Tor, L.
Deposit date:2005-05-19
Release date:2005-08-09
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for the EBA-175 Erythrocyte Invasion Pathway of the Malaria Parasite Plasmodium falciparum.
Cell(Cambridge,Mass.), 122, 2005
5TSZ
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BU of 5tsz by Molmil
Crystal structure of Plasmodium vivax CelTOS
Descriptor: Pv cell-traversal protein, SODIUM ION
Authors:Tolia, N.H, Jimah, J.R.
Deposit date:2016-10-31
Release date:2016-12-28
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.002 Å)
Cite:Malaria parasite CelTOS targets the inner leaflet of cell membranes for pore-dependent disruption.
Elife, 5, 2016
6OAO
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BU of 6oao by Molmil
Structure of DBP in complex with human neutralizing antibody 092096
Descriptor: Antibody 092096 single chain variable fragment, Duffy binding surface protein region II, SULFATE ION
Authors:Urusova, D, Tolia, N.H.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (3.497 Å)
Cite:Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP.
Nat Microbiol, 4, 2019
6WG9
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BU of 6wg9 by Molmil
Crystal structure of tetracycline destructase Tet(X7)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Tetracycline destructase Tet(X7)
Authors:Kumar, H, Tolia, N.H.
Deposit date:2020-04-05
Release date:2021-02-10
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Tetracycline-inactivating enzymes from environmental, human commensal, and pathogenic bacteria cause broad-spectrum tetracycline resistance.
Commun Biol, 3, 2020
8GIF
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BU of 8gif by Molmil
Crystal structure of a designed single-component Plasmodium falciparum AMA1-RON2L insertion fusion immunogen 3
Descriptor: Apical membrane antigen 1, rhoptry neck protein 2 chimera
Authors:Patel, P.N, Tolia, N.H.
Deposit date:2023-03-14
Release date:2023-08-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure-based design of a strain transcending AMA1-RON2L malaria vaccine.
Nat Commun, 14, 2023
8GIE
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BU of 8gie by Molmil
Crystal structure of a designed single-component Plasmodium falciparum AMA1-RON2L insertion fusion immunogen 2
Descriptor: Apical membrane antigen 1, rhoptry neck protein 2 chimera
Authors:Patel, P.N, Tolia, N.H.
Deposit date:2023-03-14
Release date:2023-08-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure-based design of a strain transcending AMA1-RON2L malaria vaccine.
Nat Commun, 14, 2023
8GID
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BU of 8gid by Molmil
Crystal structure of a strain-transcending single-component Plasmodium falciparum AMA1-RON2L structure-based design immunogen 1 (SBD1)
Descriptor: Apical membrane antigen 1, rhoptry neck protein 2 chimera
Authors:Patel, P.N, Tolia, N.H.
Deposit date:2023-03-14
Release date:2023-08-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-based design of a strain transcending AMA1-RON2L malaria vaccine.
Nat Commun, 14, 2023
5F3J
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BU of 5f3j by Molmil
Crystal structure of DBP in complex with inhibitory monoclonal antibody 2D10
Descriptor: Antibody 2D10 single chain variable fragment, Duffy receptor
Authors:Chen, E, Salinas, N.D, Tolia, N.H.
Deposit date:2015-12-02
Release date:2016-05-18
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (4.001 Å)
Cite:Broadly neutralizing epitopes in the Plasmodium vivax vaccine candidate Duffy Binding Protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
6B2N
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BU of 6b2n by Molmil
Crystal structure of TEM-1 beta-lactamase mutant M182N
Descriptor: Beta-lactamase TEM, SULFATE ION
Authors:Jimah, J.R, Tolia, N.H.
Deposit date:2017-09-20
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Prediction of New Stabilizing Mutations Based on Mechanistic Insights from Markov State Models.
ACS Cent Sci, 3, 2017
1R6Z
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BU of 1r6z by Molmil
The Crystal Structure of the Argonaute2 PAZ domain (as a MBP fusion)
Descriptor: Chimera of Maltose-binding periplasmic protein and Argonaute 2, NICKEL (II) ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Song, J.J, Liu, J, Tolia, N.H, Schneiderman, J, Smith, S.K, Martienssen, R.A, Hannon, G.J, Joshua-Tor, L.
Deposit date:2003-10-17
Release date:2004-01-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The crystal structure of the Argonaute2 PAZ domain reveals an RNA binding motif in RNAi effector complexes.
Nat.Struct.Biol., 10, 2003
6O38
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BU of 6o38 by Molmil
Structure of a chaperone-substrate complex
Descriptor: Acinetobacter secreted protease CpaA, SULFATE ION, Type II secretion chaperone CpaB, ...
Authors:Urusova, D.V, Tolia, N.H.
Deposit date:2019-02-26
Release date:2019-07-24
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (2.595 Å)
Cite:The structure ofAcinetobacter-secreted protease CpaA complexed with its chaperone CpaB reveals a novel mode of a T2SS chaperone-substrate interaction.
J.Biol.Chem., 294, 2019
6OAN
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BU of 6oan by Molmil
Structure of DBP in complex with human neutralizing antibody 053054
Descriptor: Antibody 053054 single chain variable fragment, Duffy binding surface protein region II, SULFATE ION
Authors:Urusova, D, Tolia, N.H.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP.
Nat Microbiol, 4, 2019
8DCC
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BU of 8dcc by Molmil
SARS-CoV-2 Receptor-Binding Domain SPEEDesign Immunogen 3 Bound to P2B-2F6 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, P2B-2F6 Fab heavy chain, P2B-2F6 Fab light chain, ...
Authors:Dickey, T.D, Tolia, N.H.
Deposit date:2022-06-16
Release date:2022-07-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Design of the SARS-CoV-2 RBD vaccine antigen improves neutralizing antibody response.
Sci Adv, 8, 2022
4GF2
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BU of 4gf2 by Molmil
Crystal structure of Plasmodium falciparum Erythrocyte Binding Antigen 140 (PfEBA-140/BAEBL)
Descriptor: Erythrocyte binding antigen 140, GLYCEROL
Authors:Lin, D.H, Malpede, B.M, Batchelor, J.D, Tolia, N.H.
Deposit date:2012-08-02
Release date:2012-09-26
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal and Solution Structures of Plasmodium falciparum Erythrocyte-binding Antigen 140 Reveal Determinants of Receptor Specificity during Erythrocyte Invasion.
J.Biol.Chem., 287, 2012
4YFS
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BU of 4yfs by Molmil
Structure of the synthetic Duffy Binding Protein (DBP) antigen DEKnull relevant for malaria vaccine design
Descriptor: Duffy receptor
Authors:Chen, E, Tolia, N.H.
Deposit date:2015-02-25
Release date:2015-03-11
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Analysis of the Synthetic Duffy Binding Protein (DBP) Antigen DEKnull Relevant for Plasmodium vivax Malaria Vaccine Design.
Plos Negl Trop Dis, 9, 2015
8EZL
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Pfs25 in complex with transmission-reducing antibody AS01-50
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 25 kDa ookinete surface antigen, Transmission-reducing antibody AS01-50, ...
Authors:Shukla, N, Tang, W.K, Tolia, N.H.
Deposit date:2022-11-01
Release date:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A human antibody epitope map of the malaria vaccine antigen Pfs25.
Npj Vaccines, 8, 2023

 

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