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PDB: 33 件

6J0I
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Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
分子名称: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Satange, R.B, Chuang, C.Y, Hou, M.H.
登録日2018-12-24
公開日2019-07-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
6J0H
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BU of 6j0h by Molmil
Crystal structure of Actinomycin D- d(TTGGCGAA) complex
分子名称: Actinomycin D, DNA (5'-D(P*TP*TP*GP*GP*CP*GP*AP*A)-3'), SODIUM ION
著者Satange, R.B, Hou, M.H.
登録日2018-12-24
公開日2019-07-24
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019
5GUN
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BU of 5gun by Molmil
Crystal structure of d(GTGGAATGGAAC)
分子名称: COBALT (II) ION, DNA (5'-D(*GP*TP*GP*GP*AP*AP*TP*GP*GP*AP*AP*C)-3')
著者Satange, R.B, Kao, Y.F, Hou, M.H.
登録日2016-08-29
公開日2017-08-30
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.588 Å)
主引用文献Parity-dependent hairpin configurations of repetitive DNA sequence promote slippage associated with DNA expansion
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
2GIS
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BU of 2gis by Molmil
Structure of the S-adenosylmethionine riboswitch mRNA regulatory element
分子名称: IRIDIUM HEXAMMINE ION, MAGNESIUM ION, S-ADENOSYLMETHIONINE, ...
著者Montange, R.K, Batey, R.T.
登録日2006-03-29
公開日2006-07-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the S-adenosylmethionine riboswitch regulatory mRNA element.
Nature, 441, 2006
3IQR
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BU of 3iqr by Molmil
SAM-I riboswitch from T. tencongensis variant A94G bound with SAM
分子名称: BARIUM ION, S-ADENOSYLMETHIONINE, SAM-I riboswitch
著者Montange, R.K, Batey, R.T.
登録日2009-08-20
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3IQN
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Free-state structural transitions of the SAM-I riboswitch
分子名称: BARIUM ION, POTASSIUM ION, S-ADENOSYLMETHIONINE, ...
著者Montange, R.K, Batey, R.T.
登録日2009-08-20
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3IQP
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SAM-I riboswitch from T. tencongensis variant A94G apo form
分子名称: BARIUM ION, SAM-I riboswitch
著者Montange, R.K, Batey, R.T.
登録日2009-08-20
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Free state conformational sampling of the SAM-I riboswitch aptamer domain.
Structure, 18, 2010
3GX2
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TteSAM-I riboswitch variant A94GU34C bound to sinefungin
分子名称: MAGNESIUM ION, RNA (94-MER), SINEFUNGIN
著者Montange, R.K, Batey, R.T.
登録日2009-04-01
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GX7
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BU of 3gx7 by Molmil
Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G mutant A6C/U7G/A87C/U88G bound with SAM
分子名称: MAGNESIUM ION, RNA (94-MER), S-ADENOSYLMETHIONINE
著者Montange, R.K, Batey, R.T.
登録日2009-04-01
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GX3
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Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAH
分子名称: MAGNESIUM ION, POTASSIUM ION, RNA (94-MER), ...
著者Montange, R.K, Batey, R.T.
登録日2009-04-01
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GX5
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BU of 3gx5 by Molmil
Crystal structure of T. tencongensis SAM-I riboswitch variant A94G/U34 bound with SAM
分子名称: MAGNESIUM ION, POTASSIUM ION, RNA (94-MER), ...
著者Montange, R.K, Batey, R.T.
登録日2009-04-01
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.402 Å)
主引用文献Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
3GX6
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BU of 3gx6 by Molmil
Crystal structure of the T. tengcongensis SAM-I riboswitch variant U34C/A94G bound with SAM in manganese chloride
分子名称: MANGANESE (II) ION, RNA (94-MER), S-ADENOSYLMETHIONINE
著者Montange, R.K, Batey, R.T.
登録日2009-04-01
公開日2010-01-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Discrimination between Closely Related Cellular Metabolites by the SAM-I Riboswitch.
J.Mol.Biol., 396, 2010
7DQ8
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BU of 7dq8 by Molmil
Crystal structure of actinomycin D-echinomycin-d(ACGCGCT/AGCTCGT) complex
分子名称: 2-CARBOXYQUINOXALINE, Actinomycin D, DNA (5'-D(P*AP*CP*GP*CP*GP*CP*T)-3'), ...
著者Satange, R.B, Hou, M.H.
登録日2020-12-22
公開日2021-12-29
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Synergistic binding of actinomycin D and echinomycin to DNA mismatch sites and their combined anti-tumour effects.
Nucleic Acids Res., 2023
7DQ0
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BU of 7dq0 by Molmil
Crystal structure of actinomycin D-echinomycin-d(ACGTGCT/AGCTCGT) complex
分子名称: 2-CARBOXYQUINOXALINE, Actinomycin D, CHLORIDE ION, ...
著者Satange, R.B, Hou, M.H.
登録日2020-12-22
公開日2021-12-29
最終更新日2024-07-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Synergistic binding of actinomycin D and echinomycin to DNA mismatch sites and their combined anti-tumour effects.
Nucleic Acids Res., 2023
4H86
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BU of 4h86 by Molmil
Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
分子名称: Peroxiredoxin type-2
著者Liu, M, Wang, F, Qiu, R, Wu, T, Gu, S, Tang, R, Ji, C.
登録日2012-09-21
公開日2012-10-10
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.004 Å)
主引用文献Crystal structure of Ahp1 from Saccharomyces cerevisiae in reduced form
To be Published
6JEA
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BU of 6jea by Molmil
crystal structure of a beta-N-acetylhexosaminidase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-N-acetylhexosaminidase, ZINC ION
著者Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
登録日2019-02-04
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.275 Å)
主引用文献Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019
6JE8
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BU of 6je8 by Molmil
crystal structure of a beta-N-acetylhexosaminidase
分子名称: Beta-N-acetylhexosaminidase, FORMIC ACID, GLYCEROL, ...
著者Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
登録日2019-02-04
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019
6JEB
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BU of 6jeb by Molmil
crystal structure of a beta-N-acetylhexosaminidase
分子名称: ACETAMIDE, Beta-N-acetylhexosaminidase, ZINC ION
著者Chen, X, Wang, J.C, Liu, M.J, Yang, W.Y, Wang, Y.Z, Tang, R.P, Zhang, M.
登録日2019-02-05
公開日2019-03-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Crystallographic evidence for substrate-assisted catalysis of beta-N-acetylhexosaminidas from Akkermansia muciniphila.
Biochem. Biophys. Res. Commun., 511, 2019
7FCV
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BU of 7fcv by Molmil
Cryo-EM structure of the Potassium channel AKT1 mutant from Arabidopsis thaliana
分子名称: PHOSPHATIDYLETHANOLAMINE, POTASSIUM ION, Potassium channel AKT1
著者Yang, G.H, Lu, Y.M, Jia, Y.T, Zhang, Y.M, Tang, R.F, Xu, X, Li, X.M, Lei, J.L.
登録日2021-07-15
公開日2022-11-09
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural basis for the activity regulation of a potassium channel AKT1 from Arabidopsis.
Nat Commun, 13, 2022
7BPV
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r(GUGGGCCGAC)/d(GTCGGCCCAC) hybrid duplex structure
分子名称: DNA (5'-D(P*GP*TP*CP*GP*GP*CP*CP*CP*AP*C)-3'), RNA (5'-R(P*GP*UP*GP*GP*GP*CP*CP*GP*AP*C)-3'), SULFATE ION
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2020-03-23
公開日2021-03-03
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.781 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
6L76
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Crystal structure of the Ni(II)(Chro)2-d(TTGGGCCGAA/TTCGGCCCAA) complex at 2.94 angstrom resolution
分子名称: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Hou, M.H, Jhan, C.R, Satange, R.B, Lin, S.M.
登録日2019-10-31
公開日2021-01-13
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.94 Å)
主引用文献Targeting the ALS/FTD-associated A-DNA kink with anthracene-based metal complex causes DNA backbone straightening and groove contraction.
Nucleic Acids Res., 49, 2021
5YZE
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BU of 5yze by Molmil
Crystal structure of the [Co2+-(chromomycin A3)2]-d(CCG)3 complex
分子名称: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
著者Hou, M.H, Chen, Y.W, Wu, P.C, Satange, R.B.
登録日2017-12-14
公開日2018-10-17
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献CoII(Chromomycin)2 Complex Induces a Conformational Change of CCG Repeats from i-Motif to Base-Extruded DNA Duplex
Int J Mol Sci, 19, 2018
7Y2P
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Crystal structure of CUG repeat RNA duplex containing A-U base pair and U-U mismatches
分子名称: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*AP*GP*CP*UP*GP*AP*A)-3'), RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2022-06-09
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023
5XJW
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Crystal Structure of the [Co2+-(Chromomycin A3)2]-CCG repeats Complex
分子名称: (1S)-5-deoxy-1-O-methyl-1-C-[(2R,3S)-3,5,7,10-tetrahydroxy-6-methyl-4-oxo-1,2,3,4-tetrahydroanthracen-2-yl]-D-xylulose, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-4-O-acetyl-2,6-dideoxy-beta-D-galactopyranose, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-beta-D-Olivopyranose-(1-3)-beta-D-Olivopyranose, ...
著者Tseng, W.H, Wu, P.C, Satange, R.B, Hou, M.H.
登録日2017-05-04
公開日2018-05-16
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Crystal Structure of the [Co2+-(Chromomycin A3)2]-CCG repeats Complex
To be published
7Y2B
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Crystal structure of CUG repeat RNA duplex containing U-U mismatches
分子名称: RNA (5'-R(P*UP*UP*CP*UP*GP*CP*UP*GP*CP*UP*GP*AP*A)-3')
著者Wang, S.C, Satange, R.B, Hou, M.H.
登録日2022-06-09
公開日2023-05-31
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural basis for water modulating RNA duplex formation in the CUG repeats of myotonic dystrophy type 1.
J.Biol.Chem., 299, 2023

 

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