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PDB: 33 results

6O44
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BU of 6o44 by Molmil
Insight into subtilisin E-S7 cleavage pattern based on crystal structure and hydrolysates peptide analysis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Nattokinase, ...
Authors:Tang, H, Shi, K, Aihara, H.
Deposit date:2019-02-28
Release date:2019-04-10
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Insight into subtilisin E-S7 cleavage pattern based on crystal structure and hydrolysates peptide analysis.
Biochem. Biophys. Res. Commun., 512, 2019
6PAK
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BU of 6pak by Molmil
Insight into subtilisin E-S7 cleavage pattern based on crystal structure and hydrolysates peptide analysis
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Subtilisin E
Authors:Tang, H, Shi, K, Aihara, H.
Deposit date:2019-06-11
Release date:2019-10-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Enhancing subtilisin thermostability through a modified normalized B-factor analysis and loop-grafting strategy.
J.Biol.Chem., 294, 2019
7KM6
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BU of 7km6 by Molmil
APOBEC3B antibody 5G7 Fv-clasp
Descriptor: 1,2-ETHANEDIOL, 5G7 human monoclonal FAB heavy chain, 5G7 human monoclonal FAB light chain, ...
Authors:Tang, H, Shi, K, Aihara, H.
Deposit date:2020-11-02
Release date:2021-05-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structural Characterization of a Minimal Antibody against Human APOBEC3B.
Viruses, 13, 2021
8HCK
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BU of 8hck by Molmil
NMR fragment-based screening against the two PDZ do-mains of MDA-9
Descriptor: 4-BUTYL-1,2-DIPHENYL-PYRAZOLIDINE-3,5-DIONE, GLYCEROL, SULFATE ION, ...
Authors:Tang, H.
Deposit date:2022-11-01
Release date:2023-11-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Inhibitors against Two PDZ Domains of MDA-9 Suppressed Migration of Breast Cancer Cells.
Int J Mol Sci, 24, 2023
5XWX
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BU of 5xwx by Molmil
Crystal structure of the four N-terminal immunoglogulin domains of Sidekick-1 protein
Descriptor: Protein sidekick-1
Authors:Tang, H, Dong, Y, He, Y.
Deposit date:2017-06-30
Release date:2018-08-29
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Architecture of cell-cell adhesion mediated by sidekicks.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5FHP
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SeMet regulator of nicotine degradation
Descriptor: GLYCEROL, MALONIC ACID, NicR
Authors:Zhang, K, Tang, H, Wu, G, Wang, W, Hu, H, Xu, P.
Deposit date:2015-12-22
Release date:2016-12-21
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Co-crystal Structure of NicR2_Hsp
To Be Published
1GHE
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BU of 1ghe by Molmil
CRYSTAL STRUCTURE OF TABTOXIN RESISTANCE PROTEIN COMPLEXED WITH AN ACYL COENZYME A
Descriptor: ACETYL COENZYME *A, ACETYLTRANSFERASE
Authors:He, H, Ding, Y, Bartlam, M, Sun, F, Le, Y, Qin, X, Tang, H, Zhang, R, Joachimiak, A, Liu, Y, Zhao, N, Rao, Z.
Deposit date:2000-12-13
Release date:2003-01-14
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Crystal Structure of Tabtoxin Resistance Protein Complexed with Acetyl Coenzyme A Reveals the Mechanism for beta-Lactam Acetylation
J.Mol.Biol., 325, 2003
3LD1
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BU of 3ld1 by Molmil
Crystal Structure of IBV Nsp2a
Descriptor: Replicase polyprotein 1a
Authors:Xu, Y, Cong, L, Wei, L, Fu, J, Chen, C, Yang, A, Tang, H, Bartlam, M, Rao, Z.
Deposit date:2010-01-12
Release date:2011-05-25
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.498 Å)
Cite:IBV nsp2 is an endosome-associated protein and viral pathogenicity factor
To be Published
7AIR
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BU of 7air by Molmil
Structure of Human Potassium Chloride Transporter KCC1 in NaCl (Subclass 2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Ebenhoch, R, Chi, G, Man, H, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Bohstedt, T, Singh, N.K, Abrusci, P, Liko, I, Tehan, B.G, Almeida, F.G, Arrowsmith, C.H, Tang, H, Robinson, C.V, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, Duerr, K.L, Structural Genomics Consortium (SGC)
Deposit date:2020-09-28
Release date:2021-06-02
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.66 Å)
Cite:Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
7AIP
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BU of 7aip by Molmil
Structure of Human Potassium Chloride Transporter KCC1 in NaCl (Reference Map)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Ebenhoch, R, Chi, G, Man, H, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Bohstedt, T, Liko, I, Tehan, B.G, Almeida, F.G, Elkins, J, Singh, N.K, Abrusci, P, Arrowsmith, C.H, Tang, H, Robinson, C.V, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, Duerr, K.L, Structural Genomics Consortium (SGC)
Deposit date:2020-09-28
Release date:2021-06-02
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
7AIQ
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BU of 7aiq by Molmil
Structure of Human Potassium Chloride Transporter KCC1 in NaCl (Subclass 1)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ADENOSINE-5'-TRIPHOSPHATE, Solute carrier family 12 member 4, ...
Authors:Ebenhoch, R, Chi, G, Man, H, Wang, D, McKinley, G, Mukhopadhyay, S.M.M, MacLean, E.M, Chalk, R, Moreau, C, Snee, M, Bohstedt, T, Singh, N.K, Abrusci, P, Liko, I, Tehan, B.G, Almeida, F.G, Arrowsmith, C.H, Tang, H, Robinson, C.V, Bountra, C, Edwards, A.M, Marsden, B.D, Burgess-Brown, N.A, Duerr, K.L, Structural Genomics Consortium (SGC)
Deposit date:2020-09-28
Release date:2021-06-02
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.72 Å)
Cite:Phospho-regulation, nucleotide binding and ion access control in potassium-chloride cotransporters.
Embo J., 40, 2021
1J4J
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BU of 1j4j by Molmil
Crystal Structure of Tabtoxin Resistance Protein (form II) complexed with an Acyl Coenzyme A
Descriptor: ACETYL COENZYME *A, TABTOXIN RESISTANCE PROTEIN
Authors:He, H, Ding, Y, Bartlam, M, Zhang, R, Duke, N, Joachimiak, A, Shao, Y, Cao, Z, Tang, H, Liu, Y, Jiang, F, Liu, J, Zhao, N, Rao, Z.
Deposit date:2001-10-02
Release date:2003-06-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal structure of tabtoxin resistance protein complexed with acetyl coenzyme A reveals the mechanism for beta-lactam acetylation.
J.Mol.Biol., 325, 2003
7OCK
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BU of 7ock by Molmil
MAT in complex with SAMH
Descriptor: S-adenosylmethionine synthase, SAM hydrolase
Authors:Simon, H, Kleiner, D, Shmulevich, F, Zarivach, R, Zalk, R, Tang, H, Ding, F, Bershtein, S.
Deposit date:2021-04-27
Release date:2021-07-21
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:SAMase of Bacteriophage T3 Inactivates Escherichia coli's Methionine S -Adenosyltransferase by Forming Heteropolymers.
Mbio, 12, 2021
5FGL
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BU of 5fgl by Molmil
Co-crystal Structure of NicR2_Hsp
Descriptor: 4-oxidanylidene-4-(6-oxidanylidene-1~{H}-pyridin-3-yl)butanoic acid, NicR
Authors:Zhang, K, Tang, H, Wu, G, Wang, W, Hu, H, Xu, P.
Deposit date:2015-12-21
Release date:2016-12-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Co-crystal Structure of NicR2_Hsp
To Be Published
9DU2
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BU of 9du2 by Molmil
SARS-CoV-2 Mpro in complex with compound 7
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-cyclopropyl-1-{[(1Z,2S)-1-imino-4-(methanesulfonyl)butan-2-yl]amino}-1-oxopropan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Authors:Bigelow, L, Tang, H, Boguslaw, N, Duda, D.M.
Deposit date:2024-10-02
Release date:2025-04-30
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Inhibition of Dimeric SARS-CoV-2 Mpro by Aldehyde and Nitrilebased Inhibitors Displays Positive Cooperativity and a Mixture of Covalent and Non-covalent Binding.
To Be Published
9DU3
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BU of 9du3 by Molmil
SARS-CoV-2 Mpro in complex with compound 1
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-cyclopropyl-1-({(2R)-1-hydroxy-3-[(3R)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Authors:Bigelow, L, Tang, H, Boguslaw, N, Duda, D.M.
Deposit date:2024-10-02
Release date:2025-04-30
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Inhibition of Dimeric SARS-CoV-2 Mpro by Aldehyde and Nitrilebased Inhibitors Displays Positive Cooperativity and a Mixture of Covalent and Non-covalent Binding.
To Be Published
1J70
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BU of 1j70 by Molmil
CRYSTAL STRUCTURE OF YEAST ATP SULFURYLASE
Descriptor: ATP SULPHURYLASE, PHOSPHATE ION, SODIUM ION
Authors:Lalor, D.J, Schnyder, T, Saridakis, V, Pilloff, D.E, Dong, A, Tang, H, Leyh, T.S, Pai, E.F.
Deposit date:2001-05-15
Release date:2003-06-17
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and functional analysis of a truncated form of Saccharomyces cerevisiae ATP sulfurylase: C-terminal domain essential for oligomer formation but not for activity.
Protein Eng., 16, 2003
9DU4
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BU of 9du4 by Molmil
SARS-CoV-2 Mpro in complex with compound 3
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-cyclopropyl-1-{[(2R)-1-hydroxy-4-(methanesulfonyl)butan-2-yl]amino}-1-oxopropan-2-yl]-4-methoxy-1H-indole-2-carboxamide
Authors:Bigelow, L, Tang, H, Boguslaw, N, Duda, D.M.
Deposit date:2024-10-02
Release date:2025-04-30
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Inhibition of Dimeric SARS-CoV-2 Mpro by Aldehyde and Nitrilebased Inhibitors Displays Positive Cooperativity and a Mixture of Covalent and Non-covalent Binding.
To Be Published
9DTZ
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BU of 9dtz by Molmil
SARS-CoV-2 Mpro in complex with compound 5
Descriptor: 3C-like proteinase nsp5, N-[(2S)-3-cyclopropyl-1-({(2R)-1-imino-3-[(3R)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxopropan-2-yl]-4-methoxy-1H-indole-2-carboxamide, SODIUM ION
Authors:Bigelow, L, Tang, H, Boguslaw, N, Duda, D.M.
Deposit date:2024-10-02
Release date:2025-04-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Inhibition of Dimeric SARS-CoV-2 Mpro by Aldehyde and Nitrilebased Inhibitors Displays Positive Cooperativity and a Mixture of Covalent and Non-covalent Binding.
To Be Published
3B3R
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BU of 3b3r by Molmil
Crystal structure of Streptomyces cholesterol oxidase H447Q/E361Q mutant bound to glycerol (0.98A)
Descriptor: Cholesterol oxidase, FLAVIN-N7 PROTONATED-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Lyubimov, A.Y, Heard, K, Tang, H, Sampson, N.S, Vrielink, A.
Deposit date:2007-10-22
Release date:2007-12-18
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (0.98 Å)
Cite:Distortion of flavin geometry is linked to ligand binding in cholesterol oxidase
Protein Sci., 16, 2007
5B1Q
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BU of 5b1q by Molmil
Human herpesvirus 6B tegument protein U14
Descriptor: GLYCEROL, U14 protein
Authors:Wang, B, Nishimura, M, Tang, H, Kawabata, A, Mahmoud, N.F, Khanlari, Z, Hamada, D, Tsuruta, H, Mori, Y.
Deposit date:2015-12-11
Release date:2016-04-20
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal Structure of Human Herpesvirus 6B Tegument Protein U14.
Plos Pathog., 12, 2016
1J48
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BU of 1j48 by Molmil
Crystal Structure of Apo-C1027
Descriptor: Apoprotein of C1027
Authors:Chen, Y, Li, J, Liu, Y, Bartlam, M, Gao, Y, Jin, L, Tang, H, Shao, Y, Zhen, Y, Rao, Z.
Deposit date:2001-07-30
Release date:2003-06-03
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal Structure of Apo-C1027 and Computer Modeling Analysis of C1027 Chromophore- Protein Complex
To be published
8TWU
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BU of 8twu by Molmil
Crystal structure of Cytochrome P450 AspB bound to N1-methylated cyclo-L-Trp-L-Pro
Descriptor: (3S,5S,8aS)-3-[(1-methyl-1H-indol-3-yl)methyl]hexahydropyrrolo[1,2-a]pyrazine-1,4-dione, Cytochrome P450 AspB, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Gering, H.E, Li, X, Tang, H, Swartz, P.D, Chang, W.-C, Makris, T.M.
Deposit date:2023-08-21
Release date:2023-09-20
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A Ferric-Superoxide Intermediate Initiates P450-Catalyzed Cyclic Dipeptide Dimerization.
J.Am.Chem.Soc., 145, 2023
1R6X
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BU of 1r6x by Molmil
The Crystal Structure of a Truncated Form of Yeast ATP Sulfurylase, Lacking the C-Terminal APS Kinase-like Domain, in complex with Sulfate
Descriptor: ATP:sulfate adenylyltransferase, COBALT (II) ION, SULFATE ION
Authors:Lalor, D.J, Schnyder, T, Saridakis, V, Pilloff, D.E, Dong, A, Tang, H, Leyh, T.S, Pai, E.F.
Deposit date:2003-10-17
Release date:2003-11-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural and functional analysis of a truncated form of Saccharomyces cerevisiae ATP sulfurylase: C-terminal domain essential for oligomer formation but not for activity
Protein Eng., 16, 2003
8JAH
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BU of 8jah by Molmil
Crystal structure of human CLEC12A C-type lectin domain
Descriptor: C-type lectin domain family 12 member A, POTASSIUM ION, SULFATE ION
Authors:Lei, Q, Tang, H, Dong, X.
Deposit date:2023-05-06
Release date:2024-03-13
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.58 Å)
Cite:Mechanistic insights into the C-type lectin receptor CLEC12A-mediated immune recognition of monosodium urate crystal.
J.Biol.Chem., 300, 2024

 

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