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PDB: 490 件

4YIL
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OYE1 W116A COMPLEXED WITH (Z)-METHYL 3-CYANO-3-(4-FLUOROPHENYL)ACRYLATE IN A NON PRODUCTIVE BINDING MODE
分子名称: FLAVIN MONONUCLEOTIDE, MAGNESIUM ION, NADPH dehydrogenase 1, ...
著者Santangelo, S, Brenna, E, Stewart, J.D, Powell III, R.W.
登録日2015-03-02
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.461 Å)
主引用文献Opposite Enantioselectivity in the Bioreduction of (Z)-beta-Aryl-beta-cyanoacrylates Mediated by the Tryptophan 116 Mutants of Old Yellow Enzyme 1: Synthetic Approach to (R)- and (S)-beta-Aryl-gamma-lactams
Adv.Synth.Catal., 357, 2015
2VZN
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Crystal structure of the major allergen from fire ant venom, Sol i 3
分子名称: VENOM ALLERGEN 3
著者Padavattan, S, Markovic-Housley, Z.
登録日2008-08-05
公開日2008-09-09
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (3.05 Å)
主引用文献Crystal Structure of the Major Allergen from Fire Ant Venom, Sol I 3
J.Mol.Biol., 383, 2008
5AYL
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Crystal structure of ERdj5 form II
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, DnaJ homolog subfamily C member 10
著者Watanabe, S, Maegawa, K, Inaba, K.
登録日2015-08-22
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
2W27
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BU of 2w27 by Molmil
CRYSTAL STRUCTURE OF THE BACILLUS SUBTILIS YKUI PROTEIN, WITH AN EAL DOMAIN, IN COMPLEX WITH SUBSTRATE C-DI-GMP AND CALCIUM
分子名称: CALCIUM ION, GUANOSINE-5'-MONOPHOSPHATE, YKUI PROTEIN
著者Padavattan, S, AndERSON, W.F, Schirmer, T.
登録日2008-10-24
公開日2009-02-24
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal Structures of Ykui and its Complex with Second Messenger C-Di-Gmp Suggests Catalytic Mechanism of Phosphodiester Bond Cleavage by Eal Domains.
J.Biol.Chem., 284, 2009
5AZZ
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BU of 5azz by Molmil
Crystal structure of seleno-insulin
分子名称: Insulin A chain, Insulin B chain
著者Watanabe, S, Okumura, M, Arai, K, Takei, T, Asahina, Y, Hojo, H, Iwaoka, M, Inaba, K.
登録日2015-10-23
公開日2017-05-03
最終更新日2017-06-14
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Preparation of Selenoinsulin as a Long-Lasting Insulin Analogue.
Angew. Chem. Int. Ed. Engl., 56, 2017
3A44
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BU of 3a44 by Molmil
Crystal structure of HypA in the dimeric form
分子名称: Hydrogenase nickel incorporation protein hypA, ZINC ION
著者Watanabe, S, Arai, T, Matsumi, R, Atomi, H, Imanaka, T, Miki, K.
登録日2009-06-30
公開日2009-10-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.31 Å)
主引用文献Crystal structure of HypA, a nickel-binding metallochaperone for [NiFe] hydrogenase maturation.
J.Mol.Biol., 394, 2009
5AYK
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Crystal structure of ERdj5 form I
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, CHLORIDE ION, DnaJ homolog subfamily C member 10
著者Watanabe, S, Maegawa, K, Inaba, K.
登録日2015-08-22
公開日2017-02-15
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Highly dynamic nature of ERdj5 is essential for enhancement of the ER associated degradation
To Be Published
4I48
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BU of 4i48 by Molmil
Structure of HLA-A68 complexed with an HIV Env derived peptide
分子名称: 9-mer peptide from Envelope glycoprotein gp160, Beta-2-microglobulin, HLA class I histocompatibility antigen, ...
著者Niu, L, Cheng, H, Zhang, S, Tan, S, Zhang, Y, Qi, J, Liu, J, Gao, G.F.
登録日2012-11-27
公開日2013-10-02
実験手法X-RAY DIFFRACTION (2.799 Å)
主引用文献Structural basis for the differential classification of HLA-A*6802 and HLA-A*6801 into the A2 and A3 supertypes
Mol.Immunol., 55, 2013
8IBX
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BU of 8ibx by Molmil
Structure of R2 with 3'UTR and DNA in unwinding state
分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.74 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBW
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Structure of R2 with 3'UTR and DNA in binding state
分子名称: 3'UTR, DNA (60-MER), Reverse transcriptase-like protein, ...
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBZ
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Structure of R2 with 5'ORF and 3'UTR
分子名称: 5ORF-linker-3UTR, Reverse transcriptase-like protein, ZINC ION
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.04 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
8IBY
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BU of 8iby by Molmil
Structure of R2 with 5'ORF
分子名称: 5'ORF RNA, Reverse transcriptase-like protein, ZINC ION
著者Deng, P, Tan, S, Wang, J, Liu, J.J.
登録日2023-02-10
公開日2023-09-20
実験手法ELECTRON MICROSCOPY (3.47 Å)
主引用文献Structural RNA components supervise the sequential DNA cleavage in R2 retrotransposon.
Cell, 186, 2023
1SRS
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BU of 1srs by Molmil
SERUM RESPONSE FACTOR (SRF) CORE COMPLEXED WITH SPECIFIC SRE DNA
分子名称: DNA (5'-D(*CP*CP*(5IU)P*TP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*CP*CP*AP*TP*G)-3'), DNA (5'-D(*CP*CP*AP*TP*GP*GP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*A P*AP*G)-3'), PROTEIN (SERUM RESPONSE FACTOR (SRF))
著者Pellegrini, L, Tan, S, Richmond, T.J.
登録日1995-07-28
公開日1995-07-28
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure of serum response factor core bound to DNA.
Nature, 376, 1995
6ISC
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BU of 6isc by Molmil
complex structure of mCD226-ecto and hCD155-D1
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CD226 antigen, Poliovirus receptor
著者Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
登録日2018-11-16
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6ISA
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BU of 6isa by Molmil
mCD226
分子名称: CD226 antigen
著者Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
登録日2018-11-16
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6ISB
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BU of 6isb by Molmil
crystal structure of human CD226
分子名称: CD226 antigen
著者Wang, H, Qi, J, Zhang, S, Li, Y, Tan, S, Gao, G.F.
登録日2018-11-16
公開日2018-12-26
最終更新日2019-02-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Binding mode of the side-by-side two-IgV molecule CD226/DNAM-1 to its ligand CD155/Necl-5.
Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6J14
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BU of 6j14 by Molmil
Complex structure of GY-14 and PD-1
分子名称: GY-14 heavy chain V fragment, GY-14 light chain V fragment, Programmed cell death protein 1
著者Chen, D, Tan, S, Whang, H, Zhang, H, Chai, Y, Qi, J, Yan, J, Gao, G.F.
登録日2018-12-27
公開日2019-11-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The FG Loop of PD-1 Serves as a "Hotspot" for Therapeutic Monoclonal Antibodies in Tumor Immune Checkpoint Therapy.
Iscience, 14, 2019
4R8P
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BU of 4r8p by Molmil
Crystal structure of the Ring1B/Bmi1/UbcH5c PRC1 ubiquitylation module bound to the nucleosome core particle
分子名称: DNA (147-mer), E3 ubiquitin-protein ligase RING2, Ubiquitin-conjugating enzyme E2 D3, ...
著者McGinty, R.K, Henrici, R.C, Tan, S.
登録日2014-09-02
公開日2014-11-05
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (3.2846 Å)
主引用文献Crystal structure of the PRC1 ubiquitylation module bound to the nucleosome.
Nature, 514, 2014
5GRJ
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BU of 5grj by Molmil
Crystal structure of human PD-L1 with monoclonal antibody avelumab
分子名称: Programmed cell death 1 ligand 1, avelumab H chain, avelumab L chain
著者Liu, K, Tan, S, Chai, Y, Chen, D, Song, H, Zhang, C.W.-H, Shi, Y, Liu, J, Tan, W, Lyu, J, Gao, S, Yan, J, Qi, J, Gao, G.F.
登録日2016-08-11
公開日2016-11-02
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.206 Å)
主引用文献Structural basis of anti-PD-L1 monoclonal antibody avelumab for tumor therapy.
Cell Res., 27, 2017
2XHB
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BU of 2xhb by Molmil
Crystal structure of DNA polymerase from Thermococcus gorgonarius in complex with hypoxanthine-containing DNA
分子名称: 5'-D(*AP*AP*AP*AP*AP*AP*AP*AP*A)-3', DNA POLYMERASE, HYPOXANTHINE-CONTAINING DNA, ...
著者Killelea, T, Ghosh, S, Tan, S.S, Heslop, P, Firbank, S.J, Kool, E.T, Connolly, B.A.
登録日2010-06-14
公開日2010-07-21
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Probing the Interaction of Archaeal DNA Polymerases with Deaminated Bases Using X-Ray Crystallography and Non-Hydrogen Bonding Isosteric Base Analogues.
Biochemistry, 49, 2010
6CW2
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BU of 6cw2 by Molmil
Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 1
分子名称: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
著者Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
登録日2018-03-29
公開日2018-09-19
最終更新日2020-01-01
実験手法X-RAY DIFFRACTION (2.67 Å)
主引用文献Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CW3
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Crystal structure of a yeast SAGA transcriptional coactivator Ada2/Gcn5 HAT subcomplex, crystal form 2
分子名称: Histone acetyltransferase GCN5, Transcriptional adapter 2, ZINC ION, ...
著者Sun, J, Paduch, M, Kim, S.A, Kramer, R.M, Barrios, A.F, Lu, V, Luke, J, Usatyuk, S, Kossiakoff, A.A, Tan, S.
登録日2018-03-29
公開日2018-09-19
最終更新日2020-03-04
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structural basis for activation of SAGA histone acetyltransferase Gcn5 by partner subunit Ada2.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
7C0D
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Crystal structure of Azospirillum brasilense L-2-keto-3-deoxyarabonate dehydratase (Hydroxypyruvate-bound form)
分子名称: L-2-keto-3-deoxyarabonate dehydratase
著者Watanabe, Y, Watanabe, S.
登録日2020-05-01
公開日2020-08-05
最終更新日2020-09-02
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Biochemical and Structural Characterization of l-2-Keto-3-deoxyarabinonate Dehydratase: A Unique Catalytic Mechanism in the Class I Aldolase Protein Superfamily.
Biochemistry, 59, 2020
3MVD
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BU of 3mvd by Molmil
Crystal structure of the chromatin factor RCC1 in complex with the nucleosome core particle
分子名称: DNA (146-MER), Histone H2A, Histone H2B 1.1, ...
著者Makde, R.D, England, J.R, Yennawar, H.P, Tan, S.
登録日2010-05-04
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of RCC1 chromatin factor bound to the nucleosome core particle.
Nature, 467, 2010
1NH2
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Crystal structure of a yeast TFIIA/TBP/DNA complex
分子名称: 5'-D(*GP*TP*TP*TP*TP*AP*TP*AP*TP*AP*CP*AP*TP*AP*CP*A)-3', 5'-D(*TP*GP*TP*AP*(5IU)P*GP*TP*AP*TP*AP*(5IU)P*AP*AP*AP*AP*C)-3', Transcription initiation factor IIA large chain, ...
著者Bleichenbacher, M, Tan, S, Richmond, T.J.
登録日2002-12-18
公開日2003-10-21
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes.
J.Mol.Biol., 332, 2003

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