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PDB: 321 results

1WO0
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BU of 1wo0 by Molmil
Solution structure of tachyplesin I in H2O
Descriptor: Tachyplesin I
Authors:Mizuguchi, M, Kamata, S, Kawabata, S, Fujitani, N, Kawano, K.
Deposit date:2004-08-11
Release date:2005-08-09
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of tachyplesin I in H2O
to be published
2JPE
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BU of 2jpe by Molmil
FHA domain of NIPP1
Descriptor: Nuclear inhibitor of protein phosphatase 1
Authors:Kumeta, H, Ogura, K, Fujioka, Y, Tanuma, N, Kikuchi, K, Inagaki, F.
Deposit date:2007-05-07
Release date:2007-05-15
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:The NMR structure of the NIPP1 FHA domain.
J.Biomol.Nmr, 40, 2008
2D35
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BU of 2d35 by Molmil
Solution structure of Cell Division Reactivation Factor, CedA
Descriptor: Cell division activator cedA
Authors:Abe, Y, Watanabe, N, Matsuda, Y, Yoshida, Y, Katayama, T, Ueda, T.
Deposit date:2005-09-26
Release date:2006-12-12
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Analysis and Molecular Interaction of Cell Division Reactivation Factor, CedA from Escherichia coli
To be Published
2DCK
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BU of 2dck by Molmil
A tetragonal-lattice structure of alkaliphilic XynJ from Bacillus sp. 41M-1
Descriptor: CALCIUM ION, GLYCEROL, xylanase J
Authors:Fibriansah, G, Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T.
Deposit date:2006-01-07
Release date:2007-03-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
To be Published
2DCJ
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BU of 2dcj by Molmil
A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, GLYCEROL, ...
Authors:Ihsanawati, Tanaka, N, Nakamura, S, Kumasaka, T.
Deposit date:2006-01-07
Release date:2007-03-20
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:A two-domain structure of alkaliphilic XynJ from Bacillus sp. 41M-1
To be Published
2D2X
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BU of 2d2x by Molmil
Crystal structure of 2-deoxy-scyllo-inosose synthase
Descriptor: 2-deoxy-scyllo-inosose synthase, COBALT (II) ION, GLYCEROL, ...
Authors:Nango, E, Kumasaka, T, Tanaka, N, Kakinuma, K, Eguchi, T.
Deposit date:2005-09-20
Release date:2006-10-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of 2-deoxy-scyllo-inosose synthase, a key enzyme in the biosynthesis of 2-deoxystreptamine-containing aminoglycoside antibiotics, in complex with a mechanism-based inhibitor and NAD+
Proteins, 70, 2008
3U0V
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BU of 3u0v by Molmil
Crystal Structure Analysis of human LYPLAL1
Descriptor: Lysophospholipase-like protein 1
Authors:Burger, M, Zimmermann, T.J, Kondoh, Y, Stege, P, Watanabe, N, Osada, H, Waldmann, H, Vetter, I.R.
Deposit date:2011-09-29
Release date:2011-11-16
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structure of the predicted phospholipase LYPLAL1 reveals unexpected functional plasticity despite close relationship to acyl protein thioesterases
J.Lipid Res., 53, 2012
7DCZ
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BU of 7dcz by Molmil
Crystal Structure of BACE1 in complex with N-{3-[(4S)-2-amino-4-methyl-4H-1,3-thiazin-4-yl]-4- fluorophenyl}-5-cyanopyridine-2-carboxamide
Descriptor: Beta-secretase 1, GLYCEROL, IODIDE ION, ...
Authors:Koriyama, Y, Hori, A, Ito, H, Yonezawa, S, Baba, Y, Tanimoto, N, Ueno, T, Yamamoto, S, Yamamoto, T, Asada, N, Morimoto, K, Einaru, S, Sakai, K, Kanazu, T, Matsuda, A, Yamaguchi, Y, Oguma, T, Timmers, M, Tritsmans, L, Kusakabe, K.I, Kato, A, Sakaguchi, G.
Deposit date:2020-10-27
Release date:2021-03-10
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Discovery of Atabecestat (JNJ-54861911): A Thiazine-Based beta-Amyloid Precursor Protein Cleaving Enzyme 1 Inhibitor Advanced to the Phase 2b/3 EARLY Clinical Trial.
J.Med.Chem., 64, 2021
3VL6
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3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 580 MPa
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-29
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VKZ
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3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at atmospheric pressure
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-28
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL4
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3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 410 MPa
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-29
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL7
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3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 650 MPa
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-29
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VMK
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BU of 3vmk by Molmil
3-isopropylmalate dehydrogenase from Shewanella benthica DB21 MT-2
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-12-13
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
3VMJ
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BU of 3vmj by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-12-13
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structural analysis of 3-isopropylmalate dehydrogenase from the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
Acta Crystallogr.,Sect.F, 68, 2012
3VL3
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3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 340 MPa
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-29
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VL2
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BU of 3vl2 by Molmil
3-isopropylmalate dehydrogenase from Shewanella oneidensis MR-1 at 160 MPa
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CALCIUM ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-11-29
Release date:2012-02-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:High-pressure-induced water penetration into 3-isopropylmalate dehydrogenase
Acta Crystallogr.,Sect.D, 68, 2012
3VML
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BU of 3vml by Molmil
Chimera 3-isopropylmalate dehydrogenase between Shewanella oneidensis MR-1 (O) and Shewanella benthica DB21 MT-2 (M) from N-terminal: 20% O middle 70% M residual 10% O
Descriptor: 3-ISOPROPYLMALIC ACID, 3-isopropylmalate dehydrogenase, CHLORIDE ION, ...
Authors:Nagae, T, Watanabe, N.
Deposit date:2011-12-13
Release date:2012-12-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Structure analysis of chimeric 3-isopropylmalate dehydrogenase between the obligate piezophile Shewanella benthica DB21MT-2 and the nonpiezophile Shewanella oneidensis MR-1
To be Published
3RED
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BU of 3red by Molmil
3.0 A structure of the Prunus mume hydroxynitrile lyase isozyme-1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Hydroxynitrile lyase
Authors:Cielo, C.B.C, Yamane, T, Asano, Y, Watanabe, N, Suzuki, A, Fukuta, Y.
Deposit date:2011-04-04
Release date:2012-06-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.03 Å)
Cite:Crystal Structure of a native FAD-dependent Hydroxynitrile Lyase derived from the Japanese apricot, Prunus mume
To be Published
3W4Y
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BU of 3w4y by Molmil
Crystal structure of yeast Erv1 core
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Mitochondrial FAD-linked sulfhydryl oxidase ERV1
Authors:Kawano, S, Terao, K, Watanabe, N, Endo, T.
Deposit date:2013-01-17
Release date:2013-03-20
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of yeast Erv1 core
To be published
2BL5
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BU of 2bl5 by Molmil
Solution structure of the KH-QUA2 region of the Xenopus STAR-GSG Quaking protein.
Descriptor: MGC83862 PROTEIN
Authors:Maguire, M.L, Guler-Gane, G, Nietlispach, D, Raine, A.R.C, Zorn, A.M, Standart, N, Broadhurst, R.W.
Deposit date:2005-03-01
Release date:2005-04-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure and Backbone Dynamics of the Kh-Qua2 Region of the Xenopus Star/Gsg Quaking Protein
J.Mol.Biol., 348, 2005
6MGL
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BU of 6mgl by Molmil
Crystal structure of the catalytic domain from GH74 enzyme PoGH74 from Paenibacillus odorifer, D60A mutant in complex with XXLG and XGXXLG xyloglucan
Descriptor: 3,6,9,12,15,18,21,24,27,30,33,36,39-TRIDECAOXAHENTETRACONTANE-1,41-DIOL, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Skarina, T, Arnal, G, Watanabe, N, Brumer, H, Savchenko, A.
Deposit date:2018-09-14
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural enzymology reveals the molecular basis of substrate regiospecificity and processivity of an exemplar bacterial glycoside hydrolase family 74endo-xyloglucanase.
Biochem. J., 475, 2018

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