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PDB: 1089 results

2Z6W
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Crystal structure of human cyclophilin D in complex with cyclosporin A
Descriptor: CITRIC ACID, CYCLOSPORIN A, PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Authors:Kajitani, K, Fujihashi, M, Kobayashi, Y, Shimizu, S, Tsujimoto, Y, Miki, K.
Deposit date:2007-08-09
Release date:2008-04-29
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (0.96 Å)
Cite:Crystal Structure of Human Cyclophilin D in Complex with its Inhibitor, Cyclosporin a at 0.96-A Resolution.
Proteins, 70, 2008
3VUP
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BU of 3vup by Molmil
Beta-1,4-mannanase from the common sea hare Aplysia kurodai
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Beta-1,4-mannanase, SULFATE ION
Authors:Mizutani, K, Tsuchiya, S, Toyoda, M, Nanbu, Y, Tominaga, K, Yuasa, K, Takahashi, N, Tsuji, A, Mikami, B.
Deposit date:2012-07-04
Release date:2012-10-17
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Structure of beta-1,4-mannanase from the common sea hare Aplysia kurodai at 1.05 A resolution.
Acta Crystallogr.,Sect.F, 68, 2012
7C9R
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BU of 7c9r by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF THIORHODOVIBRIO STRAIN 970
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (6~{E},8~{E},10~{E},12~{E},14~{E},16~{E},18~{E},20~{E},22~{E},24~{E},26~{E})-2,31-dimethoxy-2,6,10,14,19,23,27,31-octamethyl-dotriaconta-6,8,10,12,14,16,18,20,22,24,26-undecaene, Alpha subunit 1 of light-harvesting 1 complex, ...
Authors:Tani, K, Kanno, R, Makino, Y, Hall, M, Takenouchi, M, Imanishi, M, Yu, L.-J, Overmann, J, Madigan, M.T, Kimura, Y, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2020-06-07
Release date:2020-10-07
Last modified:2020-10-14
Method:ELECTRON MICROSCOPY (2.82 Å)
Cite:Cryo-EM structure of a Ca 2+ -bound photosynthetic LH1-RC complex containing multiple alpha beta-polypeptides.
Nat Commun, 11, 2020
7F0L
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BU of 7f0l by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOBACTER SPHAEROIDES MONOMER
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, Antenna pigment protein beta chain, BACTERIOCHLOROPHYLL A, ...
Authors:Tani, K, Nagashima, V.P, Kanno, R, Kawamura, S, Kikuchi, R, Ji, X.-C, Hall, M, Yu, L.-J, Kimura, Y, Madigan, M.T, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2021-06-05
Release date:2021-11-10
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.94 Å)
Cite:A previously unrecognized membrane protein in the Rhodobacter sphaeroides LH1-RC photocomplex.
Nat Commun, 12, 2021
1GP9
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BU of 1gp9 by Molmil
A New Crystal Form of the Nk1 Splice Variant of Hgf/Sf Demonstrates Extensive Hinge Movement and Suggests that the Nk1 Dimer Originates by Domain Swapping
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, HEPATOCYTE GROWTH FACTOR
Authors:Watanabe, K, Chirgadze, D.Y, Lietha, D, Gherardi, E, Blundell, T.L.
Deposit date:2001-10-31
Release date:2001-11-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:A New Crystal Form of the Nk1 Splice Variant of Hgf/Sf Demonstrates Extensive Hinge Movement and Suggests that the Nk1 Dimer Originates by Domain Swapping
J.Mol.Biol., 319, 2002
7E3Y
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BU of 7e3y by Molmil
Crystal structure of serine acetyltransferase from Salmonella typhimurium complexed with cysteine
Descriptor: CYSTEINE, Serine acetyltransferase
Authors:Momitani, K, Shiba, T, Sawa, T, Ono, K, Hurukawa, S.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of serine acetyltransferase from Salmonella typhimurium
To Be Published
3VM5
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BU of 3vm5 by Molmil
Recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris
Descriptor: CALCIUM ION, CHLORIDE ION, alpha-amylase
Authors:Mizutani, K, Toyoda, M, Mikami, B.
Deposit date:2011-12-08
Release date:2012-06-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Structural and functional characterization of recombinant medaka fish alpha-amylase expressed in yeast Pichia pastoris.
Biochim.Biophys.Acta, 1824, 2012
7EQD
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BU of 7eqd by Molmil
STRUCTURE OF PHOTOSYNTHETIC LH1-RC SUPER-COMPLEX OF RHODOSPIRILLUM RUBRUM
Descriptor: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, 2-azanyl-5-[(2~{E},6~{E},8~{E},10~{E},12~{E},14~{E},18~{E},22~{E},26~{E},30~{E},34~{E})-3,7,11,15,19,23,27,31,35,39-decamethyltetraconta-2,6,8,10,12,14,18,22,26,30,34,38-dodecaenyl]-3-methoxy-6-methyl-cyclohexa-2,5-diene-1,4-dione, CARDIOLIPIN, ...
Authors:Tani, K, Kanno, R, Ji, X.-C, Yu, L.-J, Hall, M, Kimura, Y, Madigan, M.T, Mizoguchi, A, Humbel, B.M, Wang-Otomo, Z.-Y.
Deposit date:2021-05-01
Release date:2021-08-18
Method:ELECTRON MICROSCOPY (2.76 Å)
Cite:Cryo-EM Structure of the Photosynthetic LH1-RC Complex from Rhodospirillum rubrum .
Biochemistry, 2021
3AAF
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BU of 3aaf by Molmil
Structure of WRN RQC domain bound to double-stranded DNA
Descriptor: ACETATE ION, DNA (5'-D(*AP*CP*CP*CP*TP*AP*AP*TP*TP*AP*GP*GP*GP*T)-3'), Werner syndrome ATP-dependent helicase
Authors:Kitano, K, Hakoshima, T.
Deposit date:2009-11-16
Release date:2010-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for DNA strand separation by the unconventional winged-helix domain of RecQ helicase WRN
Structure, 18, 2010
3KDQ
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BU of 3kdq by Molmil
Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
Descriptor: uncharacterized conserved protein
Authors:Zhang, R, Wu, R, Tan, K, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-10-23
Release date:2009-11-10
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of a functionally unknown conserved protein from Corynebacterium diphtheriae.
To be Published
9DDY
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BU of 9ddy by Molmil
The Crystal Structure of Geranyltranstransferase from Streptococcus pneumoniae TIGR4
Descriptor: GLYCEROL, Geranyltranstransferase
Authors:Kim, Y, Tan, A, Endres, M, Tan, K, Joachimik, A, Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:2024-08-28
Release date:2024-09-18
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:The Crystal Structure of Geranyltranstransferase from Streptococcus pneumoniae TIGR4
To Be Published
2Q06
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BU of 2q06 by Molmil
Crystal structure of Influenza A Virus H5N1 Nucleoprotein
Descriptor: Nucleoprotein
Authors:Ng, A.K.L, Zhang, H, Tan, K, Wang, J, Shaw, P.C.
Deposit date:2007-05-21
Release date:2008-05-27
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of the influenza virus A H5N1 nucleoprotein: implications for RNA binding, oligomerization, and vaccine design.
Faseb J., 22, 2008
3C72
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BU of 3c72 by Molmil
Engineered RabGGTase in complex with a peptidomimetic inhibitor
Descriptor: CALCIUM ION, Geranylgeranyl transferase type-2 subunit alpha, Geranylgeranyl transferase type-2 subunit beta, ...
Authors:Guo, Z, Wu, Y.W, Tan, K.T, Bon, R.S, Guiu-Rozas, E, Delon, C, Nguyen, U.T, Wetzel, S, Arndt, S, Goody, R.S, Blankenfeldt, W, Alexandrov, K, Waldmann, H.
Deposit date:2008-02-06
Release date:2008-07-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of selective RabGGTase inhibitors and crystal structure of a RabGGTase-inhibitor complex.
Angew.Chem.Int.Ed.Engl., 47, 2008
5WTP
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BU of 5wtp by Molmil
Crystal structure of the C-terminal domain of outer membrane protein A (OmpA) from Capnocytophaga gingivalis
Descriptor: OmpA family protein, SULFATE ION
Authors:Dai, S, Tan, K, Ye, S, Zhang, R.
Deposit date:2016-12-13
Release date:2017-12-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structure of thrombospondin type 3 repeats in bacterial outer membrane protein A reveals its intra-repeat disulfide bond-dependent calcium-binding capability.
Cell Calcium, 66, 2017
7RJ1
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BU of 7rj1 by Molmil
Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
Descriptor: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Chorismate mutase, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-20
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of Aro7p chorismate mutase from Candida albicans, complex with L-Trp
To Be Published
7RGN
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BU of 7rgn by Molmil
Crystal structure of putative fructose-1,6-bisphosphate aldolase from Candida auris
Descriptor: Fructose-bisphosphate aldolase, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-15
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative fructose-1,6-bisphosphate aldolase from Candida auris
To Be Published
7REU
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BU of 7reu by Molmil
Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
Descriptor: 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase, CHLORIDE ION, GLYCEROL, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Joachimiak, A, Satchell, K.J.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2021-07-13
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Crystal structure of Aro4p, 3-deoxy-D-arabino-heptulosonate-7-phosphate (DAHP) synthase from Candida auris, L-Tyr complex
To Be Published
4XQ2
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BU of 4xq2 by Molmil
Ensemble refinement of cystathione gamma lyase (CalE6) D7G from Micromonospora echinospora
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, CalE6, ...
Authors:Wang, F, Yennamalli, R.M, Singh, S, Tan, K, Thorson, J.S, Phillips Jr, G.N, Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2015-01-18
Release date:2015-04-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The crystal structure of cystathione gamma lyase (CalE6) from Micromonospora echinospora
To Be Published
4UX1
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BU of 4ux1 by Molmil
Cryo-EM structure of antagonist-bound E2P gastric H,K-ATPase (SCH.E2. AlF)
Descriptor: POTASSIUM-TRANSPORTING ATPASE ALPHA CHAIN 1, POTASSIUM-TRANSPORTING ATPASE SUBUNIT BETA
Authors:Abe, K, Tani, K, Fujiyoshi, Y.
Deposit date:2014-08-18
Release date:2014-09-17
Last modified:2014-11-12
Method:ELECTRON CRYSTALLOGRAPHY (8 Å)
Cite:Systematic Comparison of Molecular Conformations of H+,K+-ATPase Reveals an Important Contribution of the A-M2 Linker for the Luminal Gating.
J.Biol.Chem., 289, 2014
5SWD
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BU of 5swd by Molmil
Structure of the adenine riboswitch aptamer domain in an intermediate-bound state
Descriptor: ADENINE, MAGNESIUM ION, Vibrio vulnificus strain 93U204 chromosome II, ...
Authors:Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
5SWE
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BU of 5swe by Molmil
Ligand-bound structure of adenine riboswitch aptamer domain converted in crystal from its ligand-free state using ligand mixing serial femtosecond crystallography
Descriptor: ADENINE, Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain
Authors:Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
Deposit date:2016-08-08
Release date:2016-11-23
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
4S17
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BU of 4s17 by Molmil
The crystal structure of glutamine synthetase from Bifidobacterium adolescentis ATCC 15703
Descriptor: ACETATE ION, Glutamine synthetase, MAGNESIUM ION
Authors:Cuff, M, Tan, K, Mack, J, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-01-08
Release date:2015-01-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The crystal structure of glutamine synthetase from Bifidobacterium adolescentis ATCC 15703
To be Published
4RYE
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BU of 4rye by Molmil
The crystal structure of D-ALANYL-D-ALANINE CARBOXYPEPTIDASE from Mycobacterium tuberculosis H37Rv
Descriptor: D-alanyl-D-alanine carboxypeptidase
Authors:Cuff, M, Tan, K, Hatzos-Skintges, C, Jedrzejczak, R, Sacchettini, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Structures of Mtb Proteins Conferring Susceptibility to Known Mtb Inhibitors (MTBI)
Deposit date:2014-12-15
Release date:2015-01-28
Last modified:2017-11-22
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:The crystal structure of D-ALANYL-D-ALANINE CARBOXYPEPTIDASE from Mycobacterium tuberculosis H37Rv
To be Published
3LJR
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BU of 3ljr by Molmil
GLUTATHIONE TRANSFERASE (THETA CLASS) FROM HUMAN IN COMPLEX WITH THE GLUTATHIONE CONJUGATE OF 1-MENAPHTHYL SULFATE
Descriptor: 1-MENAPHTHYL GLUTATHIONE CONJUGATE, GLUTATHIONE S-TRANSFERASE, SULFATE ION
Authors:Rossjohn, J, Mckinstry, W.J, Oakley, A.J, Verger, D, Flanagan, J, Chelvanayagam, G, Tan, K.L, Board, P.G, Parker, M.W.
Deposit date:1998-03-08
Release date:1999-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Human theta class glutathione transferase: the crystal structure reveals a sulfate-binding pocket within a buried active site.
Structure, 6, 1998
3O12
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BU of 3o12 by Molmil
The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
Descriptor: 1,2-ETHANEDIOL, SULFATE ION, Uncharacterized protein YJL217W
Authors:Zhang, R, Tan, K, Xu, X, Cui, H, Chin, S, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-07-20
Release date:2010-09-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The crystal structure of a functionally unknown protein from Saccharomyces cerevisiae.
TO BE PUBLISHED

226707

數據於2024-10-30公開中

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