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PDB: 1089 results

4J7J
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BU of 4j7j by Molmil
The crystal structure of a secreted protein EsxB (Mutant G53A) from Bacillus anthracis str. Sterne
Descriptor: GLYCEROL, secreted protein EsxB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-13
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.458 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant, G53A) from Bacillus anthracis str. Sterne
To be Published
4J7K
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BU of 4j7k by Molmil
The crystal structure of a secreted protein EsxB (Mutant E54Q) from Bacillus anthracis str. Sterne
Descriptor: secreted protein EsxB
Authors:Fan, Y, Tan, K, Chhor, G, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-13
Release date:2013-03-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:The crystal structure of a secreted protein EsxB (Mutant E54Q) from Bacillus anthracis str. Sterne
To be Published
4JDU
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BU of 4jdu by Molmil
The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.
Descriptor: Aerotolerance-related membrane protein, CALCIUM ION, FORMIC ACID
Authors:Fan, Y, Tan, K, Bigelow, L, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-02-25
Release date:2013-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:The crystal structure of an aerotolerance-related membrane protein from Bacteroides fragilis NCTC 9343 with multiple mutations to serines.
To be Published
4KT7
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BU of 4kt7 by Molmil
The crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase from Anaerococcus prevotii DSM 20548
Descriptor: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, CHLORIDE ION, SODIUM ION
Authors:Borek, D, Tan, K, Stols, L, Eschenfeidt, W.H, Otwinoski, Z, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2013-05-20
Release date:2013-06-05
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.001 Å)
Cite:The crystal structure of 4-diphosphocytidyl-2C-methyl-D-erythritolsynthase from Anaerococcus prevotii DSM 20548
To be Published
7JI2
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BU of 7ji2 by Molmil
Crystal Structure of H2-Kb in complex with a OVA mutant peptide
Descriptor: Beta-2-microglobulin, GLYCEROL, H-2 class I histocompatibility antigen, ...
Authors:Li, X, Mallis, R.J, Mizsei, R, Tan, K, Reinherz, E.L, Wang, J.
Deposit date:2020-07-22
Release date:2020-12-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Pre-T cell receptors topologically sample self-ligands during thymocyte beta-selection.
Science, 371, 2021
2R2Z
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BU of 2r2z by Molmil
The crystal structure of a hemolysin domain from Enterococcus faecalis V583
Descriptor: Hemolysin, ZINC ION
Authors:Zhang, R, Tan, K, Zhou, M, Bargassa, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-08-28
Release date:2007-09-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:The crystal structure of a hemolysin domain from Enterococcus faecalis V583.
To be Published
9JF5
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BU of 9jf5 by Molmil
Arginine decarboxylase in Aspergillus oryzae complexed with arginine
Descriptor: 1,2-ETHANEDIOL, AGMATINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y.
Deposit date:2024-09-04
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis.
Biochem.Biophys.Res.Commun., 733, 2024
9JFN
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BU of 9jfn by Molmil
Arginine decarboxylase in Aspergillus oryzae complexed with agmatine
Descriptor: 1,2-ETHANEDIOL, AGMATINE, DI(HYDROXYETHYL)ETHER, ...
Authors:Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y.
Deposit date:2024-09-05
Release date:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis.
Biochem.Biophys.Res.Commun., 733, 2024
9JER
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BU of 9jer by Molmil
Arginine decarboxylase in Aspergillus oryzae, ligand-free form
Descriptor: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, L-tryptophan decarboxylase PsiD-like domain-containing protein
Authors:Mikami, B, Yasukawa, K, Fujiwara, S, Takita, T, Mizutani, K, Odagaki, Y, Murakami, Y.
Deposit date:2024-09-03
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Unveiling the reaction mechanism of arginine decarboxylase in Aspergillus oryzae: Insights from crystal structure analysis.
Biochem.Biophys.Res.Commun., 733, 2024
6MIJ
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BU of 6mij by Molmil
Crystal structure of EF-Tu from Acinetobacter baumannii in complex with Mg2+ and GDP
Descriptor: Elongation factor Tu, FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Stogios, P.J, Evdokimova, E, Tan, K, Di Leo, R, Savchenko, A, Satchell, K.J.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2018-09-19
Release date:2018-10-03
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:To be published
To Be Published
5E54
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BU of 5e54 by Molmil
Two apo structures of the adenine riboswitch aptamer domain determined using an X-ray free electron laser
Descriptor: MAGNESIUM ION, Vibrio vulnificus strain 93U204 chromosome II, adenine riboswitch aptamer domain
Authors:Stagno, J.R, Wang, Y.-X, Liu, Y, Bhandari, Y.R, Conrad, C.E, Nelson, G, Li, C, Wendel, D.R, White, T.A, Barty, A, Tuckey, R.A, Zatsepin, N.A, Grant, T.D, Fromme, P, Tan, K, Ji, X, Spence, J.C.H.
Deposit date:2015-10-07
Release date:2016-11-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of riboswitch RNA reaction states by mix-and-inject XFEL serial crystallography.
Nature, 541, 2017
4QA9
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BU of 4qa9 by Molmil
Ensemble refinement of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus.
Descriptor: 1,2-ETHANEDIOL, Epoxide hydrolase, SULFATE ION
Authors:Wang, F, Tan, K, Bigelow, L, Clancy, S, Babnigg, G, Bingman, C.A, Yennamalli, R, Lohman, J, Ma, M, Shen, B, Joachimiak, A, Phillips Jr, G.N, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-05-02
Release date:2014-05-21
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Ensemble refinement of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus.
To be Published
4DCA
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BU of 4dca by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, ADP-bound
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Aminoglycoside phosphotransferase, MAGNESIUM ION
Authors:Stogios, P.J, Minasov, G, Singer, A.U, Tan, K, Nocek, B, Evdokimova, E, Egorova, O, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-01-17
Release date:2012-02-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, ADP-bound
TO BE PUBLISHED
3U7I
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BU of 3u7i by Molmil
The crystal structure of FMN-dependent NADH-azoreductase 1 (GBAA0966) from Bacillus anthracis str. Ames Ancestor
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FMN-dependent NADH-azoreductase 1, ...
Authors:Zhang, R, Gu, M, Tan, K, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-10-13
Release date:2011-11-09
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of FMN-dependent NADH-azoreductase 1 (GBAA0966) from Bacillus anthracis str. Ames Ancestor
To be Published
2LJR
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BU of 2ljr by Molmil
GLUTATHIONE TRANSFERASE APO-FORM FROM HUMAN
Descriptor: GLUTATHIONE S-TRANSFERASE
Authors:Rossjohn, J, Mckinstry, W.J, Oakley, A.J, Verger, D, Flanagan, J, Chelvanayagam, G, Tan, K.L, Board, P.G, Parker, M.W.
Deposit date:1998-03-08
Release date:1999-03-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Human theta class glutathione transferase: the crystal structure reveals a sulfate-binding pocket within a buried active site.
Structure, 6, 1998
3V75
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BU of 3v75 by Molmil
Crystal structure of putative orotidine 5'-phosphate decarboxylase from Streptomyces avermitilis ma-4680
Descriptor: Orotidine 5'-phosphate decarboxylase
Authors:Stogios, P.J, Xu, X, Cui, H, Kudritska, M, Tan, K, Edwards, A, Savchenko, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-12-20
Release date:2012-05-09
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of putative orotidine 5'-phosphate decarboxylase from Streptomyces avermitilis ma-4680
To be Published
3UZR
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BU of 3uzr by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, apo form
Descriptor: 1,2-ETHANEDIOL, Aminoglycoside phosphotransferase, DI(HYDROXYETHYL)ETHER, ...
Authors:Stogios, P.J, Minasov, G, Singer, A.U, Tan, K, Nocek, B, Evdokimova, E, Egorova, E, Di Leo, R, Savchenko, A, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2011-12-07
Release date:2011-12-21
Last modified:2011-12-28
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of aminoglycoside phosphotransferase APH(2'')-Ib, apo form
TO BE PUBLISHED
4E4Y
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BU of 4e4y by Molmil
The crystal structure of a short chain dehydrogenase family protein from Francisella tularensis subsp. tularensis SCHU S4
Descriptor: GLYCEROL, SULFATE ION, Short chain dehydrogenase family protein
Authors:Zhang, R, Zhou, M, Tan, K, Peterson, S, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2012-03-13
Release date:2012-03-28
Method:X-RAY DIFFRACTION (1.803 Å)
Cite:The crystal structure of a short chain dehydrogenase family protein from Francisella tularensis subsp. tularensis SCHU S4
To be Published
4I1D
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BU of 4i1d by Molmil
The crystal structure of an ABC transporter substrate-binding protein from Bradyrhizobium japonicum USDA 110
Descriptor: ABC transporter substrate-binding protein, ACETATE ION, D-MALATE, ...
Authors:Fan, Y, Tan, K, Mack, J, Zerbs, S, Collart, F, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-20
Release date:2012-12-05
Last modified:2013-09-25
Method:X-RAY DIFFRACTION (2.201 Å)
Cite:Structural and functional characterization of solute binding proteins for aromatic compounds derived from lignin: p-Coumaric acid and related aromatic acids.
Proteins, 81, 2013
4I6V
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BU of 4i6v by Molmil
The crystal structure of an amidohydrolase 2 from Planctomyces limnophilus DSM 3776
Descriptor: ACETATE ION, Amidohydrolase 2, GLYCEROL, ...
Authors:Fan, Y, Tan, K, Wu, R, Bearden, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-11-30
Release date:2013-02-06
Method:X-RAY DIFFRACTION (2.137 Å)
Cite:The crystal structure of an amidohydrolase 2 from Planctomyces limnophilus DSM 3776
To be Published
7TQ1
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BU of 7tq1 by Molmil
Crystal structure of adaptive laboratory evolved sulfonamide-resistant Dihydropteroate Synthase (DHPS) from Escherichia coli in complex with 6-hydroxymethylpterin
Descriptor: 6-HYDROXYMETHYLPTERIN, Dihydropteroate synthase
Authors:Stogios, P.J, Skarina, T, Tan, K, Venkatesan, M, Fruci, M, Joachimiak, A, Savchenko, A, Satchell, K.J.F, Center for Structural Biology of Infectious Diseases (CSBID), Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2022-01-26
Release date:2023-05-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.73 Å)
Cite:Molecular mechanism of plasmid-borne resistance to sulfonamide antibiotics.
Nat Commun, 14, 2023
1IZC
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BU of 1izc by Molmil
Crystal Structure Analysis of Macrophomate synthase
Descriptor: MAGNESIUM ION, PYRUVIC ACID, macrophomate synthase intermolecular Diels-Alderase
Authors:Ose, T, Watanabe, K, Mie, T, Honma, M, Watanabe, H, Yao, M, Oikawa, H, Tanaka, I.
Deposit date:2002-10-01
Release date:2003-04-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Insight into a natural Diels-Alder reaction from the structure of macrophomate synthase.
Nature, 422, 2003
7COT
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BU of 7cot by Molmil
Structure of post fusion core of SARS-CoV-2 S2 subunit
Descriptor: Spike glycoprotein
Authors:Lin, M.H, Tan, K.P, Hsu, C.H.
Deposit date:2020-08-05
Release date:2021-08-18
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Crystal structure of post fusion core of SARS-CoV-2 S2 subunit
To Be Published
4DBX
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BU of 4dbx by Molmil
Crystal structure of aminoglycoside phosphotransferase APH(2")-ID/APH(2")-IVA
Descriptor: APH(2")-ID
Authors:Stogios, P.J, Minasov, G, Tan, K, Nocek, B, Singer, A.U, Evdokimova, E, Egorova, E, Di Leo, R, Li, H, Shakya, T, Wright, G.D, Savchenko, A, Anderson, W.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2012-01-16
Release date:2012-02-01
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.004 Å)
Cite:A small molecule discrimination map of the antibiotic resistance kinome.
Chem.Biol., 18, 2011
1IOI
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BU of 1ioi by Molmil
x-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, pyrococcus furiosus, and its cys-free mutant
Descriptor: PYRROLIDONE CARBOXYL PEPTIDASE
Authors:Tanaka, H, Chinami, M, Ota, M, Tsukihara, T, Yutani, K.
Deposit date:2001-03-09
Release date:2001-03-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:X-ray crystalline structures of pyrrolidone carboxyl peptidase from a hyperthermophile, Pyrococcus furiosus, and its cys-free mutant.
J.Biochem., 130, 2001

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