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PDB: 906 件

6ZIC
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CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE-1 (RPMFE1) COMPLEXED WITH 3S-HYDROXYBUTANOYL-COA AND NADH
分子名称: 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, 3-HYDROXYBUTANOYL-COENZYME A, GLYCEROL, ...
著者Wierenga, R.K, Sridhar, S, Kiema, T.R.
登録日2020-06-25
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE-1 (RPMFE1) COMPLEXED WITH 3S-HYDROXYBUTANOYL-COA AND NADH
To Be Published
6ZPL
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Inward-open structure of human glycine transporter 1 in complex with a benzoylisoindoline inhibitor, sybody Sb_GlyT1#7 and bound Na and Cl ions.
分子名称: CHLORIDE ION, Endoglucanase H, SODIUM ION, ...
著者Shahsavar, A, Stohler, P, Bourenkov, G, Zimmermann, I, Siegrist, M, Guba, W, Pinard, E, Sinning, S, Seeger, M.A, Schneider, T.R, Dawson, R.J.P, Nissen, P.
登録日2020-07-08
公開日2021-03-17
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (3.945 Å)
主引用文献Structural insights into the inhibition of glycine reuptake.
Nature, 591, 2021
7ULK
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Human TRAP1 NM in complex with 42C
分子名称: CALCIUM ION, Heat shock protein 75 kDa, mitochondrial, ...
著者Stachowski, T.R, Nithianantham, S, Vanarotti, M, Fischer, M.
登録日2022-04-05
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Pan-HSP90 ligand binding reveals isoform-specific differences in plasticity and water networks.
Protein Sci., 32, 2023
7UFZ
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BU of 7ufz by Molmil
Crystal structure of TDP1 complexed with compound XZ768
分子名称: (4-{[(4S)-2-phenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)phosphonic acid, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
著者Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
登録日2022-03-23
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.559 Å)
主引用文献Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7ULJ
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Hsp90b N-terminal domain in complex with 42C
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, GLYCEROL, Heat shock protein HSP 90-beta, ...
著者Stachowski, T.R, Nithianantham, S, Vanarotti, M, Fischer, M.
登録日2022-04-05
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Pan-HSP90 ligand binding reveals isoform-specific differences in plasticity and water networks.
Protein Sci., 32, 2023
7UFY
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BU of 7ufy by Molmil
Crystal structure of TDP1 complexed with compound XZ766
分子名称: 1,2-ETHANEDIOL, Tyrosyl-DNA phosphodiesterase 1, [(4-{[(4S)-2,7-diphenylimidazo[1,2-a]pyridin-3-yl]amino}phenyl)methyl]phosphonic acid
著者Lountos, G.T, Zhao, X.Z, Wang, W, Tropea, J.E, Needle, D, Pommier, Y, Burke, T.R.
登録日2022-03-23
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.584 Å)
主引用文献Phosphonic acid-containing inhibitors of tyrosyl-DNA phosphodiesterase 1.
Front Chem, 10, 2022
7ULL
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BU of 7ull by Molmil
Human Grp94 N-terminal domain in complex with 42C
分子名称: DIMETHYL SULFOXIDE, Endoplasmin, GLYCEROL, ...
著者Stachowski, T.R, Nithianantham, S, Vanarotti, M, Fischer, M.
登録日2022-04-05
公開日2023-04-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.31 Å)
主引用文献Pan-HSP90 ligand binding reveals isoform-specific differences in plasticity and water networks.
Protein Sci., 32, 2023
5INI
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BU of 5ini by Molmil
Structural basis for acyl-CoA carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics
分子名称: HEXANOYL-COENZYME A, Putative carboxyl transferase
著者Valentic, T.R, Ray, L, Miyazawa, T, Withall, D.M, Song, L, Milligan, J.C, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.85 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
7AF2
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Salmonella typhimurium neuraminidase mutant (D62G)
分子名称: GLYCEROL, PHOSPHATE ION, Sialidase
著者Salinger, M.T, Kuhn, P, Laver, W.G, Pape, T, Schneider, T.R, Sheldrick, G.M, Vimr, E.R, Garman, E.F.
登録日2020-09-19
公開日2020-09-30
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.792 Å)
主引用文献Salmonella typhimurium neuraminidase mutant (D62G)
To Be Published
7AEY
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Salmonella typhimurium neuraminidase in complex with isocarba-DANA.
分子名称: (3~{S},4~{S},5~{R})-4-acetamido-3-oxidanyl-5-[(1~{S},2~{R})-1,2,3-tris(oxidanyl)propyl]cyclohexane-1-carboxylic acid, GLYCEROL, PHOSPHATE ION, ...
著者Salinger, M.T, Kuhn, P, Laver, W.G, Pape, T, Schneider, T.R, Sheldrick, G.M, Vasella, A.T, Vimr, E.R, Vorwerk, S, Garman, E.F.
登録日2020-09-18
公開日2020-10-21
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (0.919 Å)
主引用文献Salmonella typhimurium neuraminidase in complex with isocarba-DANA.
To Be Published
5IRA
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BU of 5ira by Molmil
Expanding Nature's Catalytic Repertoire -Directed Evolution of an Artificial Metalloenzyme for In Vivo Metathesis
分子名称: Artificial Metathesase, [1-[4-[[5-[(3~{a}~{S},4~{S},6~{a}~{R})-2-oxidanylidene-1,3,3~{a},4,6,6~{a}-hexahydrothieno[3,4-d]imidazol-4-yl]pentanoylamino]methyl]-2,6-dimethyl-phenyl]-3-(2,4,6-trimethylphenyl)-4,5-dihydroimidazol-1-ium-2-yl]-bis(chloranyl)ruthenium
著者Heinisch, T, Jeschek, M, Reuter, R, Trindler, C, Panke, S, Ward, T.R.
登録日2016-03-12
公開日2016-08-31
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Directed evolution of artificial metalloenzymes for in vivo metathesis.
Nature, 537, 2016
7URH
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BU of 7urh by Molmil
Crystal structure of Ferritin 2 from Caenorhabditis elegans, FTN-2
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, FE (III) ION, Ferritin
著者Malcolm, T.R, Maher, M.J, Mubarak, S.S.M.
登録日2022-04-22
公開日2023-04-26
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.468 Å)
主引用文献Biochemical Characterization of Caenorhabditis elegans Ferritins.
Biochemistry, 62, 2023
7USN
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Crystal structure of ferritin 1 from Caenorhabditis elegans, FTN-1
分子名称: FE (III) ION, Ferritin, GLYCEROL, ...
著者Malcolm, T.R, Maher, M.J, Mubarak, S.S.M.
登録日2022-04-25
公開日2023-04-26
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.789 Å)
主引用文献Biochemical Characterization of Caenorhabditis elegans Ferritins.
Biochemistry, 62, 2023
6Z5O
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BU of 6z5o by Molmil
CRYSTAL STRUCTURE OF RAT PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE-1 (RPMFE1) COMPLEXED WITH COENZYME-A AND OXIDISED NICOTINAMIDE ADENINE DINUCLEOTIDE
分子名称: COENZYME A, GLYCEROL, NICOTINAMIDE, ...
著者Wierenga, R.K, Sridhar, S, Kiema, T.R.
登録日2020-05-27
公開日2020-12-09
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic binding studies of rat peroxisomal multifunctional enzyme type 1 with 3-ketodecanoyl-CoA: capturing active and inactive states of its hydratase and dehydrogenase catalytic sites.
Acta Crystallogr D Struct Biol, 76, 2020
5FAO
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BU of 5fao by Molmil
CTX-M-15 in complex with FPI-1465
分子名称: Beta-lactamase, [[(3~{R},6~{S})-1-methanoyl-6-[[(3~{S})-pyrrolidin-3-yl]oxycarbamoyl]piperidin-3-yl]amino] hydrogen sulfate
著者King, A.M, King, D.T, French, S, Brouillette, E, Asli, A, Alexander, A.N, Vuckovic, M, Maiti, S.N, Parr, T.R, Brown, E.D, Malouin, F, Strynadka, N.C.J, Wright, G.D.
登録日2015-12-11
公開日2016-02-17
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-beta-Lactamases and Penicillin-Binding Proteins.
Acs Chem.Biol., 11, 2016
5ING
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BU of 5ing by Molmil
A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender unit
分子名称: Putative carboxyl transferase
著者Valentic, T.R, Ray, L, Miyazawa, T, Song, L, Withall, D.M, Milligan, J.C, Takahashi, S, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
5FAS
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BU of 5fas by Molmil
OXA-48 in complex with FPI-1523
分子名称: Beta-lactamase, CADMIUM ION, CHLORIDE ION, ...
著者King, A.M, King, D.T, French, S, Brouillette, E, Asli, A, Alexander, A.N, Vuckovic, M, Maiti, S.N, Parr, T.R, Brown, E.D, Malouin, F, Strynadka, N.C.J, Wright, G.D.
登録日2015-12-11
公開日2016-01-20
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural and Kinetic Characterization of Diazabicyclooctanes as Dual Inhibitors of Both Serine-beta-Lactamases and Penicillin-Binding Proteins.
Acs Chem.Biol., 11, 2016
5INF
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BU of 5inf by Molmil
Structural basis for acyl-CoA carboxylase-mediated assembly of unusual polyketide synthase extender units incorporated into the stambomycin antibiotics
分子名称: Carboxyl transferase, HEXANOYL-COENZYME A
著者Valentic, T.R, Ray, L, Miyazawa, T, Withall, D.M, Song, L, Osada, H, Tsai, S.C, Challis, G.L.
登録日2016-03-07
公開日2016-12-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献A crotonyl-CoA reductase-carboxylase independent pathway for assembly of unusual alkylmalonyl-CoA polyketide synthase extender units.
Nat Commun, 7, 2016
7B5J
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BU of 7b5j by Molmil
Anti-CRISPR associated (Aca) protein, Aca2
分子名称: Anti-CRISPR associated (Aca) protein, Aca2, GLYCEROL
著者Usher, B, Birkholz, N, Fineran, P.C, Blower, T.R.
登録日2020-12-03
公開日2021-06-23
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.34 Å)
主引用文献Crystal structure of the anti-CRISPR repressor Aca2.
J.Struct.Biol., 213, 2021
7AEG
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BU of 7aeg by Molmil
SARS-CoV-2 main protease in a covalent complex with SDZ 224015 derivative, compound 5
分子名称: 3C-like proteinase, DIMETHYL SULFOXIDE, N-[(benzyloxy)carbonyl]-L-valyl-N-[(1S)-1-(carboxymethyl)-3-fluoro-2-oxopropyl]-L-alaninamide
著者Owen, C.D, Redhead, M.A, Lukacik, P, Strain-Damerell, C, Fearon, D, Brewitz, L, Collette, A, Robinson, C, Collins, P, Radoux, C, Navratilova, I, Douangamath, A, von Delft, F, Malla, T.R, Nugen, T, Hull, H, Tumber, A, Schofield, C.J, Hallet, D, Stuart, D.I, Hopkins, A.L, Walsh, M.A.
登録日2020-09-17
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
Sci Rep, 11, 2021
7AEH
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BU of 7aeh by Molmil
SARS-CoV-2 main protease in a covalent complex with a pyridine derivative of ABT-957, compound 1
分子名称: (2~{R})-5-oxidanylidene-~{N}-[(2~{R},3~{S})-3-oxidanyl-4-oxidanylidene-1-phenyl-4-(pyridin-2-ylmethylamino)butan-2-yl]-1-(phenylmethyl)pyrrolidine-2-carboxamide, 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
著者Owen, C.D, Redhead, M.A, Lukacik, P, Strain-Damerell, C, Fearon, D, Brewitz, L, Collette, A, Robinson, C, Collins, P, Radoux, C, Navratilova, I, Douangamath, A, von Delft, F, Malla, T.R, Nugen, T, Hull, H, Tumber, A, Schofield, C.J, Hallet, D, Stuart, D.I, Hopkins, A.L, Walsh, M.A.
登録日2020-09-17
公開日2021-07-07
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Bispecific repurposed medicines targeting the viral and immunological arms of COVID-19.
Sci Rep, 11, 2021
5FTP
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BU of 5ftp by Molmil
sulfur SAD phasing of Cdc23Nterm: data collection with a tailored X- ray beam size at 2.69 A wavelength (4.6 keV)
分子名称: ANAPHASE-PROMOTING COMPLEX SUBUNIT 8
著者Cianci, M, Groves, M.R, Barford, D, Schneider, T.R.
登録日2016-01-14
公開日2016-03-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Data Collection with a Tailored X-Ray Beam Size at 2.69 A Wavelength (4.6 Kev): Sulfur Sad Phasing of Cdc23Nterm
Acta Crystallogr.,Sect.D, 72, 2016
2NQC
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BU of 2nqc by Molmil
Crystal structure of ig-like domain 23 from human filamin C
分子名称: Filamin-C, GLYCEROL, IMIDAZOLE, ...
著者Sjekloca, L, Pudas, R, Sjoeblom, B, Konarev, P, Carugo, O, Rybin, V, Kiema, T.R, Svergun, D, Ylanne, J, Djinovic-Carugo, K.
登録日2006-10-31
公開日2007-09-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of human filamin C domain 23 and small angle scattering model for filamin C 23-24 dimer
J.Mol.Biol., 368, 2007
1S81
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PORCINE TRYPSIN WITH NO INHIBITOR BOUND
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SODIUM ION, ...
著者Transue, T.R, Krahn, J.M, Gabel, S.A, DeRose, E.F, London, R.E.
登録日2004-01-30
公開日2004-03-16
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献X-ray and NMR characterization of covalent complexes of trypsin, borate, and alcohols.
Biochemistry, 43, 2004
6D3F
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BU of 6d3f by Molmil
Crystal Structure of the PTP epsilon D2 domain
分子名称: Receptor-type tyrosine-protein phosphatase epsilon
著者Lountos, G.T, Raran-Kurussi, S, Zhao, B.M, Dyas, B.K, Austin, B.P, Burke Jr, T.R, Ulrich, R.G, Waugh, D.S.
登録日2018-04-16
公開日2018-10-17
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.271 Å)
主引用文献High-resolution crystal structures of the D1 and D2 domains of protein tyrosine phosphatase epsilon for structure-based drug design.
Acta Crystallogr D Struct Biol, 74, 2018

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