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7PMP
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BU of 7pmp by Molmil
Solution structure of Legionella pneumophila LspD
Descriptor: Type II protein secretion LspD
Authors:Portlock, T.J, Garnett, J.A.
Deposit date:2021-09-02
Release date:2022-09-14
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Solution structure of Legionella pneumophila LspD N0
To Be Published
8PYO
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BU of 8pyo by Molmil
5 micrometer HEWL crystals solved at room-temperature using fixed-target serial crystallography.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Mason, T.J, Carrillo, M, Beale, J.H, Padeste, C.
Deposit date:2023-07-25
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs.
Iucrj, 10, 2023
8PYP
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BU of 8pyp by Molmil
25 micrometer HEWL crystals solved at room-temperature using fixed-target serial crystallography.
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Mason, T.J, Carrillo, M, Beale, J.H, Padeste, C.
Deposit date:2023-07-25
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Micro-structured polymer fixed targets for serial crystallography at synchrotrons and XFELs.
Iucrj, 10, 2023
8Q2D
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BU of 8q2d by Molmil
Crystal structure of the E. coli PqiC Lipoprotein residues 17-187
Descriptor: Intermembrane transport lipoprotein PqiC
Authors:Cooper, B.F, Knowles, T.J.
Deposit date:2023-08-02
Release date:2023-09-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:An octameric PqiC toroid stabilises the outer-membrane interaction of the PqiABC transport system.
Embo Rep., 25, 2024
8Q2C
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BU of 8q2c by Molmil
Crystal structure of the E. coli PqiC Lipoprotein
Descriptor: Intermembrane transport lipoprotein PqiC
Authors:Cooper, B.F, Ratkeviciute, G.R, Knowles, T.J.
Deposit date:2023-08-02
Release date:2023-09-20
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:An octameric PqiC toroid stabilises the outer-membrane interaction of the PqiABC transport system.
Embo Rep., 25, 2024
3IT1
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BU of 3it1 by Molmil
Crystal Structure Francisella tularensis histidine acid phosphatase complexed with L(+)-tartrate
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, ACETATE ION, Acid phosphatase, ...
Authors:Singh, H, Felts, R.L, Reilly, T.J, Tanner, J.J.
Deposit date:2009-08-27
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.691 Å)
Cite:Crystal Structures of the histidine acid phosphatase from Francisella tularensis provide insight into substrate recognition.
J.Mol.Biol., 394, 2009
8PBB
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BU of 8pbb by Molmil
CHAPSO treated partial catalytic component (comprising only AnfD & AnfK, lacking AnfG and FeFeco) of iron nitrogenase from Rhodobacter capsulatus
Descriptor: FE(8)-S(7) CLUSTER, Nitrogenase iron-iron protein, beta subunit, ...
Authors:Schmidt, F.V, Schulz, L, Zarzycki, J, Prinz, S, Erb, T.J, Rebelein, J.G.
Deposit date:2023-06-09
Release date:2023-10-04
Last modified:2024-01-31
Method:ELECTRON MICROSCOPY (2.49 Å)
Cite:Structural insights into the iron nitrogenase complex.
Nat.Struct.Mol.Biol., 31, 2024
4Z7J
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BU of 4z7j by Molmil
Structure of Acetobacter aceti PurE-S57A
Descriptor: 1,2-ETHANEDIOL, 2-(2-METHOXYETHOXY)ETHANOL, 5-O-phosphono-beta-D-ribofuranose, ...
Authors:Kappock, T.J, Sullivan, K.L.
Deposit date:2015-04-07
Release date:2016-04-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.502 Å)
Cite:Mutation of the conserved serine in two PurE classes
To Be Published
7Q12
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BU of 7q12 by Molmil
Human GYS1-GYG1 complex activated state bound to glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
Authors:McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
Deposit date:2021-10-17
Release date:2022-07-27
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
7Q0B
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BU of 7q0b by Molmil
Human GYS1-GYG1 complex inhibited state
Descriptor: Glycogen [starch] synthase, muscle, Glycogenin-1
Authors:McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
Deposit date:2021-10-14
Release date:2022-07-27
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
7Q0S
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BU of 7q0s by Molmil
Human GYS1-GYG1 complex inhibited-like state bound to glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
Authors:McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
Deposit date:2021-10-16
Release date:2022-07-27
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
7Q13
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BU of 7q13 by Molmil
Human GYS1-GYG1 complex activated state bound to glucose-6-phosphate, uridine diphosphate, and glucose
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, Glycogen [starch] synthase, muscle, ...
Authors:McCorvie, T.J, Shrestha, L, Froese, D.S, Ferreira, I.M, Yue, W.W.
Deposit date:2021-10-17
Release date:2022-07-27
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis for the regulation of human glycogen synthase by phosphorylation and glucose-6-phosphate.
Nat.Struct.Mol.Biol., 29, 2022
3IKN
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BU of 3ikn by Molmil
Crystal structure of galactose bound trimeric human lung surfactant protein D
Descriptor: CALCIUM ION, Pulmonary surfactant-associated protein D, beta-D-galactopyranose
Authors:Shrive, A.K, Greenhough, T.J.
Deposit date:2009-08-06
Release date:2009-11-17
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural characterisation of ligand-binding determinants in human lung surfactant protein D: influence of Asp325
J.Mol.Biol., 394, 2009
5ACT
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BU of 5act by Molmil
W228S-Investigation of the impact from residues W228 and Y233 in the metallo-beta-lactamase GIM-1
Descriptor: GIM-1 PROTEIN, ZINC ION
Authors:Skagseth, S, Carlsen, T.J, Bjerga, G.E.K, Spencer, J, Samuelsen, O, Leiros, H.-K.S.
Deposit date:2015-08-17
Release date:2015-12-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Role of Residues W228 and Y233 in the Structure and Activity of Metallo-Beta-Lactamase Gim-1.
Antimicrob.Agents Chemother., 60, 2015
4BBV
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BU of 4bbv by Molmil
The PB0 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-28
Release date:2012-11-14
Last modified:2019-01-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
4BBU
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BU of 4bbu by Molmil
The PR2 Photocycle Intermediate of Photoactive Yellow Protein
Descriptor: 4'-HYDROXYCINNAMIC ACID, PHOTOACTIVE YELLOW PROTEIN
Authors:Schotte, F, Cho, H.S, Kaila, V.R.I, Kamikubo, H, Dashdorj, N, Henry, E.R, Graber, T.J, Henning, R, Wulff, M, Hummer, G, Kataoka, M, Anfinrud, P.A.
Deposit date:2012-09-27
Release date:2012-11-14
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Watching a Signaling Protein Function in Real Time Via 100-Ps Time-Resolved Laue Crystallography.
Proc.Natl.Acad.Sci.USA, 109, 2012
7PXZ
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BU of 7pxz by Molmil
Reduced form of SARS-CoV-2 Main Protease determined by XFEL radiation
Descriptor: 3C-like proteinase nsp5, CHLORIDE ION
Authors:Schubert, R, Reinke, P, Galchenkova, M, Oberthuer, D, Murillo, G.E.P, Kim, C, Bean, R, Turk, D, Hinrichs, W, Middendorf, P, Round, A, Schmidt, C, Mills, G, Kirkwood, H, Han, H, Koliyadu, J, Bielecki, J, Gelisio, L, Sikorski, M, Kloos, M, Vakilii, M, Yefanov, O.N, Vagovic, P, de-Wijn, R, Letrun, R, Guenther, S, White, T.A, Sato, T, Srinivasan, V, Kim, Y, Chretien, A, Han, S, Brognaro, H, Maracke, J, Knoska, J, Seychell, B.C, Brings, L, Norton-Baker, B, Geng, T, Dore, A.S, Uetrecht, C, Redecke, L, Beck, T, Lorenzen, K, Betzel, C, Mancuso, A.P, Bajt, S, Chapman, H.N, Meents, A, Lane, T.J.
Deposit date:2021-10-08
Release date:2023-01-18
Last modified:2024-07-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:SARS-CoV-2 M pro responds to oxidation by forming disulfide and NOS/SONOS bonds.
Nat Commun, 15, 2024
7PZQ
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BU of 7pzq by Molmil
Oxidized form of SARS-CoV-2 Main Protease determined by XFEL radiation
Descriptor: 3C-like proteinase nsp5, DIMETHYL SULFOXIDE
Authors:Schubert, R, Reinke, P, Galchenkova, M, Oberthuer, D, Murillo, G.E.P, Kim, C, Bean, R, Turk, D, Hinrichs, W, Middendorf, P, Round, A, Schmidt, C, Mills, G, Kirkwood, H, Han, H, Koliyadu, J, Bielecki, J, Gelisio, L, Sikorski, M, Kloos, M, Vakilii, M, Yefanov, O.N, Vagovic, P, de-Wijn, R, Letrun, R, Guenther, S, White, T.A, Sato, T, Srinivasan, V, Kim, Y, Chretien, A, Han, S, Brognaro, H, Maracke, J, Knoska, J, Seychell, B.C, Brings, L, Norton-Baker, B, Geng, T, Dore, A.S, Uetrecht, C, Redecke, L, Beck, T, Lorenzen, K, Betzel, C, Mancuso, A.P, Bajt, S, Chapman, H.N, Meents, A, Lane, T.J.
Deposit date:2021-10-13
Release date:2023-01-25
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:SARS-CoV-2 M pro responds to oxidation by forming disulfide and NOS/SONOS bonds.
Nat Commun, 15, 2024
4YOO
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BU of 4yoo by Molmil
p107 pocket domain in complex with LIN52 P29A peptide
Descriptor: LIN52 peptide, Retinoblastoma-like protein 1,Retinoblastoma-like protein 1, SULFATE ION
Authors:Guiley, K.Z, Liban, T.J, Felthousen, J.G, Ramanan, P, Tripathi, S, Litovchick, L, Rubin, S.M.
Deposit date:2015-03-12
Release date:2015-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural mechanisms of DREAM complex assembly and regulation.
Genes Dev., 29, 2015
4YC8
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BU of 4yc8 by Molmil
C-Helix-Out Binding of Dasatinib Analog to c-Abl Kinase
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-({6-[4-(2-hydroxyethyl)piperazin-1-yl]-2-methylpyrimidin-4-yl}amino)-N-(4-phenoxyphenyl)-1,3-thiazole-5-carboxamide, ...
Authors:Kwarcinski, F.E, Brandvold, K.B, Johnson, T.J, Phadke, S, Meagher, J.L, Seeliger, M.A, Stuckey, J.A, Soellner, M.B.
Deposit date:2015-02-19
Release date:2016-03-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Conformation-Selective Analogues of Dasatinib Reveal Insight into Kinase Inhibitor Binding and Selectivity.
Acs Chem.Biol., 11, 2016
8OJ4
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BU of 8oj4 by Molmil
Structure of the MlaCD complex (1:6 stoichiometry)
Descriptor: Intermembrane phospholipid transport system binding protein MlaC, Intermembrane phospholipid transport system binding protein MlaD
Authors:Wotherspoon, P, Bui, S, Sridhar, P, Bergeron, J.R.C, Knowles, T.J.
Deposit date:2023-03-23
Release date:2024-07-10
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.35 Å)
Cite:Structure of the MlaC-MlaD complex reveals molecular basis of periplasmic phospholipid transport.
Nat Commun, 15, 2024
8OJG
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BU of 8ojg by Molmil
Structure of the MlaCD complex (2:6 stoichiometry)
Descriptor: Intermembrane phospholipid transport system binding protein MlaC, Intermembrane phospholipid transport system binding protein MlaD
Authors:Wotherspoon, P, Bui, S, Sridhar, P, Bergeron, J.R.C, Knowles, T.J.
Deposit date:2023-03-24
Release date:2024-07-10
Last modified:2024-09-04
Method:ELECTRON MICROSCOPY (4.38 Å)
Cite:Structure of the MlaC-MlaD complex reveals molecular basis of periplasmic phospholipid transport.
Nat Commun, 15, 2024
3TCM
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BU of 3tcm by Molmil
Crystal Structure of Alanine Aminotransferase from Hordeum vulgare
Descriptor: Alanine aminotransferase 2, D-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL]-N,O-CYCLOSERYLAMIDE
Authors:Rydel, T.J, Sturman, E.J, Halls, C, Chen, S, Zeng, J, Evdokimov, A, Duff, S.M.G.
Deposit date:2011-08-09
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.71 Å)
Cite:The Enzymology of alanine aminotransferase (AlaAT) isoforms from Hordeum vulgare and other organisms, and the HvAlaAT crystal structure.
Arch.Biochem.Biophys., 528, 2012
6XBS
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BU of 6xbs by Molmil
Streptomyces coelicolor methylmalonyl-CoA epimerase (E43Q) in complex with 2-nitronate-propionyl-CoA
Descriptor: CHLORIDE ION, COBALT (II) ION, Methylmalonyl-CoA epimerase, ...
Authors:Stunkard, L.M, Boram, T.J, Benjamin, A.B, Bower, J.B, Lohman, J.R.
Deposit date:2020-06-07
Release date:2020-07-01
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Streptomyces coelicolor methylmalonyl-CoA epimerase (E43Q) in complex with 2-nitronate-propionyl-CoA
To Be Published
7OP6
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BU of 7op6 by Molmil
Bacteroides thetaiotaomicron mannosidase GH2 with beta-manno-configured cyclophellitol aziridine
Descriptor: (1~{R},2~{R},3~{S},4~{R},5~{R},6~{R})-5-(hydroxymethyl)-7-azabicyclo[4.1.0]heptane-2,3,4-triol, 1,2-ETHANEDIOL, BROMIDE ION, ...
Authors:McGregor, N.G.S, Beenakker, T.J.M, Kuo, C, Wong, C, Offen, W.A, Armstrong, Z, Codee, J.D.C, Aerts, J.M.F.G, Florea, B.I, Overkleeft, H.S, Davies, G.J.
Deposit date:2021-05-29
Release date:2022-05-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Synthesis of broad-specificity activity-based probes for exo -beta-mannosidases.
Org.Biomol.Chem., 20, 2022

226707

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