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PDB: 1831 results

8JF1
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BU of 8jf1 by Molmil
Human sodium-dependent vitamin C transporter 1 in an apo occluded state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, CHOLESTEROL HEMISUCCINATE, ...
Authors:Kobayashi, T.A, Kusakizako, T, Nureki, O.
Deposit date:2023-05-16
Release date:2024-05-22
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.85 Å)
Cite:Cryo-EM structures of human sodium-dependent vitamin C transporter 1
To Be Published
6EFN
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BU of 6efn by Molmil
Structure of a RiPP maturase, SkfB
Descriptor: FE2/S2 (INORGANIC) CLUSTER, IRON/SULFUR CLUSTER, MAGNESIUM ION, ...
Authors:Grell, T.A.J, Drennan, C.L.
Deposit date:2018-08-16
Release date:2018-10-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.291 Å)
Cite:Structure of a RiPP maturase, SkfB
J.Biol.Chem., 2018
8JEZ
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BU of 8jez by Molmil
Human sodium-dependent vitamin C transporter 1 in an apo inward-open state
Descriptor: 1-palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ...
Authors:Kobayashi, T.A, Kusakizako, T, Nureki, O.
Deposit date:2023-05-16
Release date:2024-06-19
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Cryo-EM structures of human sodium-dependent vitamin C transporter 1
To Be Published
6EHG
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BU of 6ehg by Molmil
complement component C3b in complex with a nanobody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Complement C3, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Jensen, R.K, Andersen, K.R, Gadeberg, T.A.F, Laursen, N.S, Andersen, G.R.
Deposit date:2017-09-13
Release date:2018-02-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A potent complement factor C3-specific nanobody inhibiting multiple functions in the alternative pathway of human and murine complement.
J. Biol. Chem., 293, 2018
2CBS
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BU of 2cbs by Molmil
CELLULAR RETINOIC ACID BINDING PROTEIN II IN COMPLEX WITH A SYNTHETIC RETINOIC ACID (RO-13 6307)
Descriptor: 3-METHYL-7-(5,5,8,8-TETRAMETHYL-5,6,7,8-TETRAHYDRO-NAPHTHALEN-2-YL) -OCTA-2,4,6-TRIENOIC ACID, PROTEIN (CRABP-II)
Authors:Chaudhuri, B, Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1999-02-22
Release date:1999-12-22
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of cellular retinoic acid binding proteins I and II in complex with synthetic retinoids.
Acta Crystallogr.,Sect.D, 55, 1999
2CBR
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BU of 2cbr by Molmil
CELLULAR RETINOIC ACID BINDING PROTEIN I IN COMPLEX WITH A RETINOBENZOIC ACID (AM80)
Descriptor: 4-[(5,5,8,8-tetramethyl-5,6,7,8-tetrahydronaphthalen-2-yl)carbamoyl]benzoic acid, PROTEIN (CRABP-I)
Authors:Chaudhuri, B, Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1999-02-22
Release date:1999-12-21
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structures of cellular retinoic acid binding proteins I and II in complex with synthetic retinoids.
Acta Crystallogr.,Sect.D, 55, 1999
3CBS
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BU of 3cbs by Molmil
CELLULAR RETINOIC ACID BINDING PROTEIN II IN COMPLEX WITH A SYNTHETIC RETINOIC ACID (RO-12 7310)
Descriptor: (2E,4E,6E,8E)-9-(4-hydroxy-2,3,6-trimethylphenyl)-3,7-dimethylnona-2,4,6,8-tetraenoic acid, PROTEIN (CRABP-II)
Authors:Chaudhuri, B, Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1999-02-22
Release date:1999-12-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of cellular retinoic acid binding proteins I and II in complex with synthetic retinoids.
Acta Crystallogr.,Sect.D, 55, 1999
3CTI
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BU of 3cti by Molmil
RELAXATION MATRIX REFINEMENT OF THE SOLUTION STRUCTURE OF SQUASH TRYPSIN INHIBITOR
Descriptor: TRYPSIN INHIBITOR
Authors:Nilges, M, Habazettl, J, Bruenger, A.T, Holak, T.A.
Deposit date:1991-03-27
Release date:1992-04-15
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Relaxation matrix refinement of the solution structure of squash trypsin inhibitor.
J.Mol.Biol., 219, 1991
5BRF
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BU of 5brf by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor HPOP-GlcN
Descriptor: 2-deoxy-2-{[3-(4-hydroxyphenyl)propanoyl]amino}-alpha-D-glucopyranose, Glucokinase 1, putative
Authors:D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
Deposit date:2015-05-30
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.102 Å)
Cite:Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
5BRE
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BU of 5bre by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor CBZ-GlcN
Descriptor: 2-{[(benzyloxy)carbonyl]amino}-2-deoxy-beta-D-glucopyranose, Glucokinase 1, putative
Authors:D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
Deposit date:2015-05-30
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
5BRD
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BU of 5brd by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor BENZ-GlcN
Descriptor: 2-(benzoylamino)-2-deoxy-beta-D-glucopyranose, Glucokinase 1, putative
Authors:D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
Deposit date:2015-05-30
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
5BRH
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BU of 5brh by Molmil
Crystal structure of Trypanosoma cruzi glucokinase in complex with inhibitor DBT-GlcN
Descriptor: 2-deoxy-2-({[(1,1-dioxido-1-benzothiophen-2-yl)methoxy]carbonyl}amino)-beta-D-glucopyranose, Glucokinase 1, putative
Authors:D'Antonio, E.L, Perry, K, Deinema, M.S, Kearns, S.P, Frey, T.A.
Deposit date:2015-05-30
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based approach to the identification of a novel group of selective glucosamine analogue inhibitors of Trypanosoma cruzi glucokinase.
Mol.Biochem.Parasitol., 204, 2016
2REB
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BU of 2reb by Molmil
THE STRUCTURE OF THE E. COLI RECA PROTEIN MONOMER AND POLYMER
Descriptor: REC A
Authors:Story, R.M, Steitz, T.A.
Deposit date:1992-03-06
Release date:1993-10-31
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of the E. coli recA protein monomer and polymer.
Nature, 355, 1992
1CBR
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BU of 1cbr by Molmil
CRYSTAL STRUCTURE OF CELLULAR RETINOIC-ACID-BINDING PROTEINS I AND II IN COMPLEX WITH ALL-TRANS-RETINOIC ACID AND A SYNTHETIC RETINOID
Descriptor: CELLULAR RETINOIC ACID BINDING PROTEIN TYPE I, RETINOIC ACID
Authors:Kleywegt, G.J, Bergfors, T, Jones, T.A.
Deposit date:1994-09-28
Release date:1995-01-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structures of cellular retinoic acid binding proteins I and II in complex with all-trans-retinoic acid and a synthetic retinoid.
Structure, 2, 1994
4MDP
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BU of 4mdp by Molmil
Crystal structure of a GH1 beta-glucosidase from the fungus Humicola insolens in complex with glucose
Descriptor: Beta-glucosidase, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Giuseppe, P.O, Souza, T.A.C.B, Souza, F.H.M, Zanphorlin, L.M, Machado, C.B, Ward, R.J, Jorge, J.A, Furriel, R.P.M, Murakami, M.T.
Deposit date:2013-08-23
Release date:2014-06-25
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for glucose tolerance in GH1 beta-glucosidases.
Acta Crystallogr.,Sect.D, 70, 2014
6YUR
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BU of 6yur by Molmil
Crystal structure of S. aureus FabI inhibited by SKTS1
Descriptor: 6-[4-(4-hexyl-2-oxidanyl-phenoxy)phenoxy]pyridin-2-ol, Enoyl-[acyl-carrier-protein] reductase [NADPH], NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Weinrich, J.D, Eltschkner, S, Schiebel, J, Kehrein, J, Le, T.A, Davoodi, S, Merget, B, Tonge, P.J, Engels, B, Sotriffer, C.A, Kisker, C.
Deposit date:2020-04-27
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:A Long Residence Time Enoyl-Reductase Inhibitor Explores an Extended Binding Region with Isoenzyme-Dependent Tautomer Adaptation and Differential Substrate-Binding Loop Closure.
Acs Infect Dis., 7, 2021
6YUU
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BU of 6yuu by Molmil
Crystal structure of M. tuberculosis InhA inhibited by SKTS1
Descriptor: 6-[4-(4-hexyl-2-oxidanyl-phenoxy)phenoxy]pyridin-2-ol, CHLORIDE ION, Enoyl-[acyl-carrier-protein] reductase [NADH], ...
Authors:Eltschkner, S, Schiebel, J, Kehrein, J, Le, T.A, Davoodi, S, Merget, B, Weinrich, J.D, Tonge, P.J, Engels, B, Sotriffer, C.A, Kisker, C.
Deposit date:2020-04-27
Release date:2021-03-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:A Long Residence Time Enoyl-Reductase Inhibitor Explores an Extended Binding Region with Isoenzyme-Dependent Tautomer Adaptation and Differential Substrate-Binding Loop Closure.
Acs Infect Dis., 7, 2021
3CBH
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BU of 3cbh by Molmil
THREE-DIMENSIONAL STRUCTURE OF CELLOBIOHYDROLASE FROM TRICHODERMA REESEI
Descriptor: CELLOBIOHYDROLASE II CORE PROTEIN
Authors:Jones, T.A, Rouvinen, J.
Deposit date:1990-08-06
Release date:1991-01-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of cellobiohydrolase II from Trichoderma reesei.
Science, 249, 1990
4M3P
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BU of 4m3p by Molmil
Betaine-Homocysteine S-Methyltransferase from Homo sapiens complexed with Homocysteine
Descriptor: 2-AMINO-4-MERCAPTO-BUTYRIC ACID, Betaine--homocysteine S-methyltransferase 1, POTASSIUM ION, ...
Authors:Koutmos, M, Yamada, K, Mladkova, J, Paterova, J, Diamond, C.E, Tryon, K, Jungwirth, P, Garrow, T.A, Jiracek, J.
Deposit date:2013-08-06
Release date:2014-06-18
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Specific potassium ion interactions facilitate homocysteine binding to betaine-homocysteine S-methyltransferase.
Proteins, 82, 2014
3BN3
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BU of 3bn3 by Molmil
crystal structure of ICAM-5 in complex with aL I domain
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, ...
Authors:Zhang, H, Springer, T.A, Wang, J.-h.
Deposit date:2007-12-13
Release date:2008-08-19
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.099 Å)
Cite:An unusual allosteric mobility of the C-terminal helix of a high-affinity alpha L integrin I domain variant bound to ICAM-5
Mol.Cell, 31, 2008
1EGN
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BU of 1egn by Molmil
CELLOBIOHYDROLASE CEL7A (E223S, A224H, L225V, T226A, D262G) MUTANT
Descriptor: 1,4-BETA-D-GLUCAN CELLOBIOHYDROLASE CEL7A, 2-acetamido-2-deoxy-beta-D-glucopyranose, COBALT (II) ION
Authors:Stahlberg, J, Harris, M, Jones, T.A.
Deposit date:2000-02-16
Release date:2001-05-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Engineering of a glycosidase Family 7 cellobiohydrolase to more alkaline pH optimum: the pH behaviour of Trichoderma reesei Cel7A and its E223S/ A224H/L225V/T226A/D262G mutant.
Biochem.J., 356, 2001
6TUQ
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BU of 6tuq by Molmil
Cryo-EM structure of Pf4 bacteriophage coat protein without ssDNA
Descriptor: Coat protein B of bacteriophage Pf1
Authors:Tarafder, A.K, von Kugelgen, A, Bharat, T.A.M.
Deposit date:2020-01-08
Release date:2020-02-26
Last modified:2024-05-22
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Phage liquid crystalline droplets form occlusive sheaths that encapsulate and protect infectious rod-shaped bacteria.
Proc.Natl.Acad.Sci.USA, 117, 2020
4MLS
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BU of 4mls by Molmil
Crystal structure of the SpyTag and SpyCatcher-deltaN1 complex
Descriptor: Fibronectin binding protein, SpyTag
Authors:Li, L, Fierer, J.O, Rapoport, T.A, Howarth, M.
Deposit date:2013-09-06
Release date:2013-11-13
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.984 Å)
Cite:Structural Analysis and Optimization of the Covalent Association between SpyCatcher and a Peptide Tag.
J.Mol.Biol., 426, 2014
3CAI
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BU of 3cai by Molmil
Crystal structure of Mycobacterium tuberculosis Rv3778c protein
Descriptor: POSSIBLE AMINOTRANSFERASE
Authors:Covarrubias, A.S, Larsson, A.M, Jones, T.A, Bergfors, T, Mowbray, S.L, Unge, T.
Deposit date:2008-02-20
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure and biochemical function studies of Mycobacterium tuberculosis essential protein Rv3778c
To be published
6ZEC
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BU of 6zec by Molmil
Crystal Structure of the Fab Fragment of a Glycosylated Lymphoma Antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab fragment heavy chain, Fab fragment light chain, ...
Authors:Allen, J.D, Watanabe, Y, Crispin, M, Bowden, T.A.
Deposit date:2020-06-16
Release date:2021-06-30
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Insertion of atypical glycans into the tumor antigen-binding site identifies DLBCLs with distinct origin and behavior.
Blood, 138, 2021

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