Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 367 results

1R1G
DownloadVisualize
BU of 1r1g by Molmil
Crystal Structure of the Scorpion Toxin BmBKTtx1
Descriptor: Neurotoxin BmK37
Authors:Szyk, A, Lu, W, Xu, C, Lubkowski, J.
Deposit date:2003-09-23
Release date:2004-03-02
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Structure of the scorpion toxin BmBKTtx1 solved from single wavelength anomalous scattering of sulfur.
J.Struct.Biol., 145, 2004
4PK2
DownloadVisualize
BU of 4pk2 by Molmil
tubulin acetyltransferase complex with bisubstrate analog
Descriptor: ACETYL-SER-(N-PROPANOYL-LYS)-ASP--THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A
Authors:Szyk, A, Roll-Mecak, A.
Deposit date:2014-05-13
Release date:2014-08-13
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase.
Cell, 157, 2014
4PK3
DownloadVisualize
BU of 4pk3 by Molmil
tubulin acetyltransferase complex with bisubstrate analog
Descriptor: ACETYL-SER-ASP-(N-ACETYL-LYS)-THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A
Authors:Szyk, A, Roll-Mecak, A.
Deposit date:2014-05-13
Release date:2014-08-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.347 Å)
Cite:Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase.
Cell, 157, 2014
5WC1
DownloadVisualize
BU of 5wc1 by Molmil
katanin AAA ATPase domain
Descriptor: Meiotic spindle formation protein mei-1, SULFATE ION
Authors:Szyk, A, Roll-Mecak, A.
Deposit date:2017-06-29
Release date:2017-08-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Katanin spiral and ring structures shed light on power stroke for microtubule severing.
Nat. Struct. Mol. Biol., 24, 2017
2FZS
DownloadVisualize
BU of 2fzs by Molmil
Crystal structure of E. coli ClpP with a Peptide Chloromethyl Ketone Covalently Bound at the Active Site
Descriptor: ATP-dependent Clp protease proteolytic subunit, GLYCEROL, N~2~-[(BENZYLOXY)CARBONYL]-N-[(1S,2S)-2-HYDROXY-1-(4-HYDROXYBENZYL)PROPYL]-L-LEUCINAMIDE, ...
Authors:Szyk, A, Maurizi, M.R.
Deposit date:2006-02-10
Release date:2006-05-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure at 1.9A of E. coli ClpP with a peptide covalently bound at the active site.
J.Struct.Biol., 156, 2006
6YMQ
DownloadVisualize
BU of 6ymq by Molmil
TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Single-chain variable 4, ...
Authors:Szykowska, A, Preger, C, Scacioc, A, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Davis, J.B, Burgess-Brown, N, Bullock, A.
Deposit date:2020-04-09
Release date:2021-02-17
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (3.07 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
6Y6C
DownloadVisualize
BU of 6y6c by Molmil
TREM2 extracellular domain (19-174) in complex with single-chain variable fragment (scFv-4)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Single chain variable, Triggering receptor expressed on myeloid cells 2
Authors:Szykowska, A, Preger, C, Williams, E, Mukhopadhyay, S.M.M, McKinley, G, Gruslund, S, Wigren, E, Persson, H, Arrowsmith, C.H, Edwards, A, von Delft, F, Bountra, C, Davis, J.B, Di Daniel, E, Burgess-Brown, N, Bullock, A.
Deposit date:2020-02-26
Release date:2021-02-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
6YYE
DownloadVisualize
BU of 6yye by Molmil
TREM2 extracellular domain (19-131) in complex with single-chain variable fragment (scFv-2)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, TREM2 Single chain variable 2, Triggering receptor expressed on myeloid cells 2
Authors:Szykowska, A, Preger, C, Krojer, T, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Burgess-Brown, N, Bullock, A.
Deposit date:2020-05-04
Release date:2021-02-17
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.36 Å)
Cite:Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain.
Structure, 29, 2021
4YLS
DownloadVisualize
BU of 4yls by Molmil
Tubulin Glutamylase
Descriptor: PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Tubulin polyglutamylase TTLL7
Authors:Garnham, C.P, Vemu, A, Wilson-Kubalek, E.M, Yu, I, Szyk, A, Lander, G.C, Milligan, R.A, Roll-Mecak, A.
Deposit date:2015-03-05
Release date:2015-06-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases.
Cell, 161, 2015
3TIN
DownloadVisualize
BU of 3tin by Molmil
Tubulin tyrosine ligase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
3TII
DownloadVisualize
BU of 3tii by Molmil
Tubulin tyrosine ligase
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
6P07
DownloadVisualize
BU of 6p07 by Molmil
Spastin hexamer in complex with substrate
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Sandate, C.R, Szyk, A, Zehr, E, Roll-Mecak, A, Lander, G.C.
Deposit date:2019-05-16
Release date:2019-06-12
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:An allosteric network in spastin couples multiple activities required for microtubule severing.
Nat.Struct.Mol.Biol., 26, 2019
3TIG
DownloadVisualize
BU of 3tig by Molmil
Tubulin tyrosine ligase
Descriptor: MAGNESIUM ION, Ttl protein
Authors:Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G.
Deposit date:2011-08-20
Release date:2011-10-26
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin.
Nat.Struct.Mol.Biol., 18, 2011
4YLR
DownloadVisualize
BU of 4ylr by Molmil
Tubulin Glutamylase
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Tubulin polyglutamylase TTLL7
Authors:Garnham, C.P, Vemu, A, Wilson-Kubalek, E.M, Yu, I, Szyk, A, Lander, G.C, Milligan, R.A, Roll-Mecak, A.
Deposit date:2015-03-05
Release date:2015-06-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases.
Cell, 161, 2015
1ZMM
DownloadVisualize
BU of 1zmm by Molmil
Crystal structure of human alpha-defensin-4
Descriptor: Neutrophil defensin 4
Authors:Lubkowski, J, Szyk, A, Lu, W.
Deposit date:2005-05-10
Release date:2006-05-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6.
Protein Sci., 15, 2006
1ZMQ
DownloadVisualize
BU of 1zmq by Molmil
Crystal structure of human alpha-defensin-6
Descriptor: CHLORIDE ION, Defensin 6
Authors:Lubkowski, J, Szyk, A, Lu, W.
Deposit date:2005-05-10
Release date:2006-05-30
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6.
Protein Sci., 15, 2006
4H6Z
DownloadVisualize
BU of 4h6z by Molmil
Tubulin acetyltransferase
Descriptor: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase, PHOSPHATE ION
Authors:Kizub, L, Szyk, A, Piszczek, G, Roll-Mecak, A.
Deposit date:2012-09-19
Release date:2012-11-07
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.701 Å)
Cite:Crystal structures of tubulin acetyltransferase reveal a conserved catalytic core and the plasticity of the essential N terminus.
J.Biol.Chem., 287, 2012
1ZMP
DownloadVisualize
BU of 1zmp by Molmil
Crystal structure of human defensin-5
Descriptor: CHLORIDE ION, Defensin 5, GLYCEROL, ...
Authors:Lubkowski, J, Szyk, A, Lu, W.
Deposit date:2005-05-10
Release date:2006-05-30
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6.
Protein Sci., 15, 2006
5WCB
DownloadVisualize
BU of 5wcb by Molmil
Katanin hexamer in the ring conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Meiotic spindle formation protein mei-1
Authors:Zehr, E.A, Szyk, A, Piszczek, G, Szczesna, E, Zuo, X, Roll-Mecak, A.
Deposit date:2017-06-29
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6 Å)
Cite:Katanin spiral and ring structures shed light on power stroke for microtubule severing.
Nat. Struct. Mol. Biol., 24, 2017
5WC0
DownloadVisualize
BU of 5wc0 by Molmil
katanin hexamer in spiral conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Meiotic spindle formation protein mei-1
Authors:Zehr, E.A, Szyk, A, Piszczek, G, Szczesna, E, Zuo, X, Roll-Mecak, A.
Deposit date:2017-06-29
Release date:2017-08-09
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Katanin spiral and ring structures shed light on power stroke for microtubule severing.
Nat. Struct. Mol. Biol., 24, 2017
4H6U
DownloadVisualize
BU of 4h6u by Molmil
Tubulin acetyltransferase mutant
Descriptor: ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase, PHOSPHATE ION, ...
Authors:Roll-Mecak, A, Kizub, V, Szyk, A.
Deposit date:2012-09-19
Release date:2012-11-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4482 Å)
Cite:Crystal structures of tubulin acetyltransferase reveal a conserved catalytic core and the plasticity of the essential N terminus.
J.Biol.Chem., 287, 2012
3OII
DownloadVisualize
BU of 3oii by Molmil
Crystal structure of Saccharomyces Cerevisiae Nep1/Emg1 bound to S-adenosylhomocysteine
Descriptor: Essential for mitotic growth 1, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Thomas, S.R, Szyk, A, LaRonde-LeBlanc, N.
Deposit date:2010-08-19
Release date:2010-12-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural insight into the functional mechanism of Nep1/Emg1 N1-specific pseudouridine methyltransferase in ribosome biogenesis.
Nucleic Acids Res., 39, 2011
5JCO
DownloadVisualize
BU of 5jco by Molmil
Structure and dynamics of single-isoform recombinant neuronal human tubulin
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
Authors:Vemu, A, Atherton, J, Spector, J.O, Szyk, A, Moores, C.A, Roll-Mecak, A.
Deposit date:2016-04-15
Release date:2016-05-04
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structure and Dynamics of Single-isoform Recombinant Neuronal Human Tubulin.
J.Biol.Chem., 291, 2016
8V3S
DownloadVisualize
BU of 8v3s by Molmil
Structure of CCP5 class3
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024
8V3R
DownloadVisualize
BU of 8v3r by Molmil
Structure of CCP5 class2
Descriptor: Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, ZINC ION, ...
Authors:Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A.
Deposit date:2023-11-28
Release date:2024-07-17
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Tubulin code eraser CCP5 binds branch glutamates by substrate deformation.
Nature, 631, 2024

227561

건을2024-11-20부터공개중

PDB statisticsPDBj update infoContact PDBjnumon