5WC1
| katanin AAA ATPase domain | Descriptor: | Meiotic spindle formation protein mei-1, SULFATE ION | Authors: | Szyk, A, Roll-Mecak, A. | Deposit date: | 2017-06-29 | Release date: | 2017-08-09 | Last modified: | 2023-10-04 | Method: | X-RAY DIFFRACTION (3.3 Å) | Cite: | Katanin spiral and ring structures shed light on power stroke for microtubule severing. Nat. Struct. Mol. Biol., 24, 2017
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1R1G
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4PK3
| tubulin acetyltransferase complex with bisubstrate analog | Descriptor: | ACETYL-SER-ASP-(N-ACETYL-LYS)-THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A | Authors: | Szyk, A, Roll-Mecak, A. | Deposit date: | 2014-05-13 | Release date: | 2014-08-13 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (1.347 Å) | Cite: | Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase. Cell, 157, 2014
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4PK2
| tubulin acetyltransferase complex with bisubstrate analog | Descriptor: | ACETYL-SER-(N-PROPANOYL-LYS)-ASP--THR-NH2 PEPTIDE, Alpha-tubulin N-acetyltransferase 1, COENZYME A | Authors: | Szyk, A, Roll-Mecak, A. | Deposit date: | 2014-05-13 | Release date: | 2014-08-13 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.35 Å) | Cite: | Molecular basis for age-dependent microtubule acetylation by tubulin acetyltransferase. Cell, 157, 2014
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2FZS
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6YYE
| TREM2 extracellular domain (19-131) in complex with single-chain variable fragment (scFv-2) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, TREM2 Single chain variable 2, Triggering receptor expressed on myeloid cells 2 | Authors: | Szykowska, A, Preger, C, Krojer, T, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Burgess-Brown, N, Bullock, A. | Deposit date: | 2020-05-04 | Release date: | 2021-02-17 | Last modified: | 2024-10-23 | Method: | X-RAY DIFFRACTION (3.36 Å) | Cite: | Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain. Structure, 29, 2021
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6YMQ
| TREM2 extracellular domain (19-131) in complex with single-chain variable 4 (scFv-4) | Descriptor: | (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Single-chain variable 4, ... | Authors: | Szykowska, A, Preger, C, Scacioc, A, Mukhopadhyay, S.M.M, McKinley, G, Graslund, S, Wigren, E, Persson, H, von Delft, F, Arrowsmith, C.H, Edwards, A, Bountra, C, Di Daniel, E, Davis, J.B, Burgess-Brown, N, Bullock, A. | Deposit date: | 2020-04-09 | Release date: | 2021-02-17 | Last modified: | 2024-01-31 | Method: | X-RAY DIFFRACTION (3.07 Å) | Cite: | Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain. Structure, 29, 2021
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6Y6C
| TREM2 extracellular domain (19-174) in complex with single-chain variable fragment (scFv-4) | Descriptor: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Single chain variable, Triggering receptor expressed on myeloid cells 2 | Authors: | Szykowska, A, Preger, C, Williams, E, Mukhopadhyay, S.M.M, McKinley, G, Gruslund, S, Wigren, E, Persson, H, Arrowsmith, C.H, Edwards, A, von Delft, F, Bountra, C, Davis, J.B, Di Daniel, E, Burgess-Brown, N, Bullock, A. | Deposit date: | 2020-02-26 | Release date: | 2021-02-17 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.26 Å) | Cite: | Selection and structural characterization of anti-TREM2 scFvs that reduce levels of shed ectodomain. Structure, 29, 2021
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5JCO
| Structure and dynamics of single-isoform recombinant neuronal human tubulin | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ... | Authors: | Vemu, A, Atherton, J, Spector, J.O, Szyk, A, Moores, C.A, Roll-Mecak, A. | Deposit date: | 2016-04-15 | Release date: | 2016-05-04 | Last modified: | 2024-03-06 | Method: | ELECTRON MICROSCOPY (4 Å) | Cite: | Structure and Dynamics of Single-isoform Recombinant Neuronal Human Tubulin. J.Biol.Chem., 291, 2016
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5WC0
| katanin hexamer in spiral conformation | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Meiotic spindle formation protein mei-1 | Authors: | Zehr, E.A, Szyk, A, Piszczek, G, Szczesna, E, Zuo, X, Roll-Mecak, A. | Deposit date: | 2017-06-29 | Release date: | 2017-08-09 | Last modified: | 2024-03-13 | Method: | ELECTRON MICROSCOPY (4.4 Å) | Cite: | Katanin spiral and ring structures shed light on power stroke for microtubule severing. Nat. Struct. Mol. Biol., 24, 2017
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5WCB
| Katanin hexamer in the ring conformation | Descriptor: | ADENOSINE-5'-TRIPHOSPHATE, Meiotic spindle formation protein mei-1 | Authors: | Zehr, E.A, Szyk, A, Piszczek, G, Szczesna, E, Zuo, X, Roll-Mecak, A. | Deposit date: | 2017-06-29 | Release date: | 2017-08-09 | Last modified: | 2024-03-13 | Method: | ELECTRON MICROSCOPY (6 Å) | Cite: | Katanin spiral and ring structures shed light on power stroke for microtubule severing. Nat. Struct. Mol. Biol., 24, 2017
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6P07
| Spastin hexamer in complex with substrate | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... | Authors: | Sandate, C.R, Szyk, A, Zehr, E, Roll-Mecak, A, Lander, G.C. | Deposit date: | 2019-05-16 | Release date: | 2019-06-12 | Last modified: | 2024-03-20 | Method: | ELECTRON MICROSCOPY (3.2 Å) | Cite: | An allosteric network in spastin couples multiple activities required for microtubule severing. Nat.Struct.Mol.Biol., 26, 2019
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1ZMM
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1ZMQ
| Crystal structure of human alpha-defensin-6 | Descriptor: | CHLORIDE ION, Defensin 6 | Authors: | Lubkowski, J, Szyk, A, Lu, W. | Deposit date: | 2005-05-10 | Release date: | 2006-05-30 | Last modified: | 2024-10-30 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6. Protein Sci., 15, 2006
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4YLR
| Tubulin Glutamylase | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, Tubulin polyglutamylase TTLL7 | Authors: | Garnham, C.P, Vemu, A, Wilson-Kubalek, E.M, Yu, I, Szyk, A, Lander, G.C, Milligan, R.A, Roll-Mecak, A. | Deposit date: | 2015-03-05 | Release date: | 2015-06-17 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.55 Å) | Cite: | Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases. Cell, 161, 2015
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4YLS
| Tubulin Glutamylase | Descriptor: | PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Tubulin polyglutamylase TTLL7 | Authors: | Garnham, C.P, Vemu, A, Wilson-Kubalek, E.M, Yu, I, Szyk, A, Lander, G.C, Milligan, R.A, Roll-Mecak, A. | Deposit date: | 2015-03-05 | Release date: | 2015-06-17 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.6 Å) | Cite: | Multivalent Microtubule Recognition by Tubulin Tyrosine Ligase-like Family Glutamylases. Cell, 161, 2015
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1ZMP
| Crystal structure of human defensin-5 | Descriptor: | CHLORIDE ION, Defensin 5, GLYCEROL, ... | Authors: | Lubkowski, J, Szyk, A, Lu, W. | Deposit date: | 2005-05-10 | Release date: | 2006-05-30 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Crystal structures of human {alpha}-defensins HNP4, HD5, and HD6. Protein Sci., 15, 2006
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4H6U
| Tubulin acetyltransferase mutant | Descriptor: | ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase, PHOSPHATE ION, ... | Authors: | Roll-Mecak, A, Kizub, V, Szyk, A. | Deposit date: | 2012-09-19 | Release date: | 2012-11-07 | Last modified: | 2023-09-20 | Method: | X-RAY DIFFRACTION (2.4482 Å) | Cite: | Crystal structures of tubulin acetyltransferase reveal a conserved catalytic core and the plasticity of the essential N terminus. J.Biol.Chem., 287, 2012
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4H6Z
| Tubulin acetyltransferase | Descriptor: | ACETYL COENZYME *A, Alpha-tubulin N-acetyltransferase, PHOSPHATE ION | Authors: | Kizub, L, Szyk, A, Piszczek, G, Roll-Mecak, A. | Deposit date: | 2012-09-19 | Release date: | 2012-11-07 | Last modified: | 2024-10-16 | Method: | X-RAY DIFFRACTION (2.701 Å) | Cite: | Crystal structures of tubulin acetyltransferase reveal a conserved catalytic core and the plasticity of the essential N terminus. J.Biol.Chem., 287, 2012
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3TII
| Tubulin tyrosine ligase | Descriptor: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ttl protein | Authors: | Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G. | Deposit date: | 2011-08-20 | Release date: | 2011-10-26 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin. Nat.Struct.Mol.Biol., 18, 2011
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3TIG
| Tubulin tyrosine ligase | Descriptor: | MAGNESIUM ION, Ttl protein | Authors: | Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G. | Deposit date: | 2011-08-20 | Release date: | 2011-10-26 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.5 Å) | Cite: | Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin. Nat.Struct.Mol.Biol., 18, 2011
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3TIN
| Tubulin tyrosine ligase | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Ttl protein | Authors: | Roll-Mecak, A, Szyk, A, Deaconescu, A, Piszczek, G. | Deposit date: | 2011-08-20 | Release date: | 2011-10-26 | Last modified: | 2024-02-28 | Method: | X-RAY DIFFRACTION (2.9 Å) | Cite: | Tubulin tyrosine ligase structure reveals adaptation of an ancient fold to bind and modify tubulin. Nat.Struct.Mol.Biol., 18, 2011
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3OII
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8V4K
| CCP5 in complex with microtubules class1 | Descriptor: | Cytosolic carboxypeptidase-like protein 5, GLUTAMIC ACID, GUANOSINE-5'-TRIPHOSPHATE, ... | Authors: | Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A. | Deposit date: | 2023-11-29 | Release date: | 2024-07-17 | Last modified: | 2024-10-16 | Method: | ELECTRON MICROSCOPY (3.1 Å) | Cite: | Tubulin code eraser CCP5 binds branch glutamates by substrate deformation. Nature, 631, 2024
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8V3O
| CCP5 in complex with Glu-P-peptide 1 transition state analog | Descriptor: | Cytosolic carboxypeptidase-like protein 5, D-MALATE, POTASSIUM ION, ... | Authors: | Chen, J, Zehr, E.A, Gruschus, J.M, Szyk, A, Liu, Y, Tanner, M.E, Tjandra, N, Roll-Mecak, A. | Deposit date: | 2023-11-28 | Release date: | 2024-07-17 | Last modified: | 2024-10-30 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Tubulin code eraser CCP5 binds branch glutamates by substrate deformation. Nature, 631, 2024
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