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PDB: 246 results

2BNI
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pLI mutant E20C L16G Y17H, antiparallel
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2005-03-24
Release date:2005-03-30
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structure-Based Engineering of Internal Cavities in Coiled-Coil Peptides
Biochemistry, 44, 2005
2CCF
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Antiparallel Configuration of pLI E20S
Descriptor: General control protein GCN4
Authors:Yadav, M.K, Leman, L.J, Price, D.J, Brooks 3rd, C.L, Stout, C.D, Ghadiri, M.R.
Deposit date:2006-01-16
Release date:2006-04-06
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Coiled coils at the edge of configurational heterogeneity. Structural analyses of parallel and antiparallel homotetrameric coiled coils reveal configurational sensitivity to a single solvent-exposed amino acid substitution.
Biochemistry, 45, 2006
2AMS
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BU of 2ams by Molmil
Structure of the oxidized Hipip from thermochromatium tepidum at 1.4 angstrom resolution
Descriptor: GLYCEROL, High potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hunsicker-Wang, L.M, Han, W, Stout, C.D, Noodleman, L, Fee, J.A.
Deposit date:2005-08-10
Release date:2006-08-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Geometric factors determine, in part, the electronic state of the 4Fe-4S cluster of Hipip from thermochromtium tepidum: a geomteric, crystallographic, and theoretical study.
To be Published
2AZ8
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BU of 2az8 by Molmil
HIV-1 Protease NL4-3 in complex with inhibitor, TL-3
Descriptor: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
Deposit date:2005-09-09
Release date:2006-02-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006
2AZ9
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HIV-1 Protease NL4-3 1X mutant
Descriptor: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
Deposit date:2005-09-09
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006
2AZC
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BU of 2azc by Molmil
HIV-1 Protease NL4-3 6X mutant
Descriptor: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
Deposit date:2005-09-10
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006
2AZB
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BU of 2azb by Molmil
HIV-1 Protease NL4-3 3X mutant in complex with inhibitor, TL-3
Descriptor: PROTEASE RETROPEPSIN, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Heaslet, H, Kutilek, V, Morris, G.M, Lin, Y.-C, Elder, J.H, Torbett, B.E, Stout, C.D.
Deposit date:2005-09-09
Release date:2006-02-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural Insights into the Mechanisms of Drug Resistance in HIV-1 Protease NL4-3
J.Mol.Biol., 356, 2006
2FLA
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BU of 2fla by Molmil
Structure of thereduced HiPIP from thermochromatium tepidum at 0.95 angstrom resolution
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hunsicker-Wang, L.M, Stout, C.D, Fee, J.A.
Deposit date:2006-01-05
Release date:2006-12-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Geometric factors determine, in part, the electronic state of the 4Fe-4S cluster of HiPIP: a geometric, crystallographic, and theoretical study.
To be Published
4J1T
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BU of 4j1t by Molmil
Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit in P2(1)
Descriptor: GLYCEROL, NAD(P) transhydrogenase subunit beta, NAD/NADP transhydrogenase alpha subunit 1, ...
Authors:Yamaguchi, M, Leung, J, Schurig Briccio, L.A, Gennis, R.B, Stout, C.D.
Deposit date:2013-02-02
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains
To be Published
4J16
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BU of 4j16 by Molmil
Crystal structure of Thermus thermophilus transhydrogenase heterotrimeric complex of the Alpha1 subunit dimer with the NADP binding domain (domain III) of the Beta subunit
Descriptor: CHLORIDE ION, GLYCEROL, NAD(P) transhydrogenase subunit beta, ...
Authors:Yamaguchi, M, Leung, J, Schurig Briccio, L.A, Gennis, R.B, Stout, C.D.
Deposit date:2013-02-01
Release date:2014-02-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Crystal structure analysis of Thermus thermophilus transhydrogenase soluble domains
To be Published
4JLT
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BU of 4jlt by Molmil
Crystal structure of P450 2B4(H226Y) in complex with paroxetine
Descriptor: 5-CYCLOHEXYL-1-PENTYL-BETA-D-MALTOSIDE, Cytochrome P450 2B4, GLYCEROL, ...
Authors:Shah, M.B, Pascual, J, Stout, C.D, Halpert, J.R.
Deposit date:2013-03-13
Release date:2013-06-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:A Structural Snapshot of CYP2B4 in Complex with Paroxetine Provides Insights into Ligand Binding and Clusters of Conformational States.
J.Pharmacol.Exp.Ther., 346, 2013
4K4R
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BU of 4k4r by Molmil
TL-3 inhibited Trp6Ala HIV Protease with 1-bromo-2-napthoic acid bound in exosite
Descriptor: 1-bromonaphthalene-2-carboxylic acid, BROMIDE ION, DIMETHYL SULFOXIDE, ...
Authors:Tiefenbrunn, T, Stout, C.D.
Deposit date:2013-04-12
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Fragment-Based Drug Discovery: Use of a Brominated Fragment Library Targeting HIV Protease.
Chem.Biol.Drug Des., 83, 2014
4K4P
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BU of 4k4p by Molmil
TL-3 inhibited Trp6Ala HIV Protease
Descriptor: HIV-1 protease, NITRATE ION, benzyl [(1S,4S,7S,8R,9R,10S,13S,16S)-7,10-dibenzyl-8,9-dihydroxy-1,16-dimethyl-4,13-bis(1-methylethyl)-2,5,12,15,18-pentaoxo-20-phenyl-19-oxa-3,6,11,14,17-pentaazaicos-1-yl]carbamate
Authors:Tiefenbrunn, T, Stout, C.D.
Deposit date:2013-04-12
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Crystallographic Fragment-Based Drug Discovery: Use of a Brominated Fragment Library Targeting HIV Protease.
Chem.Biol.Drug Des., 83, 2014
1NIT
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BU of 1nit by Molmil
CRYSTAL STRUCTURE OF ACONITASE WITH TRANS-ACONITATE AND NITROCITRATE BOUND
Descriptor: ACONITASE, IRON/SULFUR CLUSTER, SULFATE ION
Authors:Lauble, H, Kennedy, M.C, Beinert, H, Stout, C.D.
Deposit date:1993-01-17
Release date:1993-10-31
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of aconitase with trans-aconitate and nitrocitrate bound.
J.Mol.Biol., 237, 1994
4K4Q
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BU of 4k4q by Molmil
TL-3 inhibited Trp6Ala HIV Protease with 3-bromo-2,6-dimethoxybenzoic acid bound in flap site
Descriptor: 3-bromo-2,6-dimethoxybenzoic acid, BETA-MERCAPTOETHANOL, DIMETHYL SULFOXIDE, ...
Authors:Tiefenbrunn, T, Stout, C.D.
Deposit date:2013-04-12
Release date:2013-09-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Fragment-Based Drug Discovery: Use of a Brominated Fragment Library Targeting HIV Protease.
Chem.Biol.Drug Des., 83, 2014
1NIS
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BU of 1nis by Molmil
CRYSTAL STRUCTURE OF ACONITASE WITH TRANS-ACONITATE AND NITROCITRATE BOUND
Descriptor: 2-HYDROXY-2-NITROMETHYL SUCCINIC ACID, ACONITASE, IRON/SULFUR CLUSTER
Authors:Lauble, H, Kennedy, M.C, Beinert, H, Stout, C.D.
Deposit date:1993-01-17
Release date:1993-10-31
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal structures of aconitase with trans-aconitate and nitrocitrate bound.
J.Mol.Biol., 237, 1994
1W5H
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BU of 1w5h by Molmil
An anti-parallel four helix bundle.
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2004-08-06
Release date:2004-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Coiled Coils at the Edge of Configurational Heterogeneity. Structural Analyses of Parallel and Antiparallel Homotetrameric Coiled Coils Reveal Configurational Sensitivity to a Single Solvent-Exposed Amino Acid Substitution.
Biochemistry, 45, 2006
1W5I
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BU of 1w5i by Molmil
ABA does not affect topology of pLI.
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2004-08-07
Release date:2004-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-Based Engineering of Internal Cavities in Coiled-Coil Peptides
Biochemistry, 44, 2005
1W5K
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BU of 1w5k by Molmil
AN ANTI-PARALLEL FOUR HELIX BUNDLE
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2004-08-07
Release date:2004-09-24
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Coiled Coils at the Edge of Configurational Heterogeneity. Structural Analyses of Parallel and Antiparallel Homotetrameric Coiled Coils Reveal Configurational Sensitivity to a Single Solvent-Exposed Amino Acid Substitution.
Biochemistry, 45, 2006
1W5G
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BU of 1w5g by Molmil
An anti-parallel four helix bundle (acetimide modification).
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2004-08-06
Release date:2004-09-24
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structure-Based Engineering of Internal Cavities in Coiled-Coil Peptides
Biochemistry, 44, 2005
1W5J
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BU of 1w5j by Molmil
AN ANTI-PARALLEL FOUR HELIX BUNDLE
Descriptor: GENERAL CONTROL PROTEIN GCN4
Authors:Yadav, M.K, Leman, L.J, Stout, C.D, Ghadiri, M.R.
Deposit date:2004-08-07
Release date:2004-09-24
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Coiled Coils at the Edge of Configurational Heterogeneity. Structural Analyses of Parallel and Antiparallel Homotetrameric Coiled Coils Reveal Configurational Sensitivity to a Single Solvent-Exposed Amino Acid Substitution.
Biochemistry, 45, 2006
1XME
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BU of 1xme by Molmil
Structure of Recombinant Cytochrome ba3 Oxidase from Thermus thermophilus
Descriptor: COPPER (II) ION, Cytochrome c oxidase polypeptide I, Cytochrome c oxidase polypeptide II, ...
Authors:Hunsicker-Wang, L.M, Pacoma, R.L, Chen, Y, Fee, J.A, Stout, C.D.
Deposit date:2004-10-01
Release date:2005-03-22
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A novel cryoprotection scheme for enhancing the diffraction of crystals of recombinant cytochrome ba3 oxidase from Thermus thermophilus.
Acta Crystallogr.,Sect.D, 61, 2005
1Z11
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BU of 1z11 by Molmil
Crystal Structure of Human Microsomal P450 2A6 with Methoxsalen Bound
Descriptor: METHOXSALEN, PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450, ...
Authors:Yano, J.K, Hsu, M.H, Griffin, K.J, Stout, C.D, Johnson, E.F.
Deposit date:2005-03-02
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of human microsomal cytochrome P450 2A6 complexed with coumarin and methoxsalen
Nat.Struct.Mol.Biol., 12, 2005
1XLT
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BU of 1xlt by Molmil
Crystal structure of Transhydrogenase [(domain I)2:domain III] heterotrimer complex
Descriptor: NAD(P) transhydrogenase subunit alpha part 1, NAD(P) transhydrogenase subunit beta, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sundaresan, V, Chartron, J, Yamaguchi, M, Stout, C.D.
Deposit date:2004-09-30
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Conformational Diversity in NAD(H) and Transhydrogenase Nicotinamide Nucleotide Binding Domains
J.Mol.Biol., 346, 2005
1Z10
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BU of 1z10 by Molmil
Crystal Structure of Human Microsomal P450 2A6 with Coumarin Bound
Descriptor: COUMARIN, GLYCEROL, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Yano, J.K, Hsu, M.H, Griffin, K.J, Stout, C.D, Johnson, E.F.
Deposit date:2005-03-02
Release date:2005-08-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of human microsomal cytochrome P450 2A6 complexed with coumarin and methoxsalen
Nat.Struct.Mol.Biol., 12, 2005

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