Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1918 件

3BRD
DownloadVisualize
BU of 3brd by Molmil
CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, P212121
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3'), DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3'), ...
著者Wilson, J.J, Kovall, R.A.
登録日2007-12-21
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.21 Å)
主引用文献RAM-induced Allostery Facilitates Assembly of a Notch Pathway Active Transcription Complex.
J.Biol.Chem., 283, 2008
4BIP
DownloadVisualize
BU of 4bip by Molmil
Homology model of coxsackievirus A7 (CAV7) full capsid proteins.
分子名称: VP1, VP2, VP3
著者Seitsonen, J.J.T, Shakeel, S, Susi, P, Pandurangan, A.P, Sinkovits, R.S, Hyvonen, H, Laurinmaki, P, Yla-Pelto, J, Topf, M, Hyypia, T, Butcher, S.J.
登録日2013-04-12
公開日2013-10-02
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (8.23 Å)
主引用文献Combined Approaches to Flexible Fitting and Assessment in Virus Capsids Undergoing Conformational Change.
J.Struct.Biol., 185, 2014
3BRF
DownloadVisualize
BU of 3brf by Molmil
CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
分子名称: DNA (5'-D(*DAP*DAP*DTP*DCP*DTP*DTP*DTP*DCP*DCP*DCP*DAP*DCP*DAP*DGP*DT)-3'), DNA (5'-D(*DTP*DTP*DAP*DCP*DTP*DGP*DTP*DGP*DGP*DGP*DAP*DAP*DAP*DGP*DA)-3'), Lin-12 and glp-1 phenotype protein 1, ...
著者Wilson, J.J, Kovall, R.A.
登録日2007-12-21
公開日2008-04-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献RAM-induced Allostery Facilitates Assembly of a Notch Pathway Active Transcription Complex.
J.Biol.Chem., 283, 2008
3C9C
DownloadVisualize
BU of 3c9c by Molmil
Structural Basis of Histone H4 Recognition by p55
分子名称: CADMIUM ION, Chromatin assembly factor 1 p55 subunit, Histone H4, ...
著者Song, J.J, Garlick, J.D, Kingston, R.E.
登録日2008-02-15
公開日2008-05-13
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of histone H4 recognition by p55.
Genes Dev., 22, 2008
4CA3
DownloadVisualize
BU of 4ca3 by Molmil
SOLUTION STRUCTURE OF STREPTOMYCES VIRGINIAE VIRA ACP5B
分子名称: HYBRID POLYKETIDE SYNTHASE-NON RIBOSOMAL PEPTIDE SYNTHETASE
著者Davison, J, Dorival, J, Rabeharindranto, M.H, Chagot, B, Gruez, A, Weissman, K.J.
登録日2013-10-05
公開日2014-06-04
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Insights Into the Function of Trans-Acyl Transferase Polyketide Synthases from the Saxs Structure of a Complete Module.
Chem.Sci., 2014
8AF3
DownloadVisualize
BU of 8af3 by Molmil
Sterol carrier protein Artifical metalloenzyme incorporating Q111C mutation coupled to 2,2'-bipyridine
分子名称: COPPER (II) ION, Enoyl-CoA hydratase 2, FRAGMENT OF TRITON X-100, ...
著者Richardson, J.M, Klemencic, E, Jarvis, A.G.
登録日2022-07-15
公開日2023-08-16
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.52 Å)
主引用文献Using BpyAla to generate copper artificial metalloenzymes: a catalytic and structural study.
Catalysis Science And Technology, 14, 2024
6UVJ
DownloadVisualize
BU of 6uvj by Molmil
Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, DIMETHYL SULFOXIDE, ...
著者Johnson, J.A, Pomerantz, W.C.K.
登録日2019-11-02
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
6UWX
DownloadVisualize
BU of 6uwx by Molmil
Cocrystal of BRD4(D1) with a ethyl carbamate thiazepane inhibitor
分子名称: 1,2-ETHANEDIOL, Bromodomain-containing protein 4, ethyl (7S)-7-(thiophen-2-yl)-1,4-thiazepane-4-carboxylate
著者Johnson, J.A, Pomerantz, W.C.K.
登録日2019-11-05
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.307 Å)
主引用文献Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
6UVM
DownloadVisualize
BU of 6uvm by Molmil
Cocrystal of BRD4(D1) with a methyl carbamate thiazepane inhibitor
分子名称: 1,2-ETHANEDIOL, 1-[(7S)-7-(thiophen-2-yl)-6,7-dihydro-1,4-thiazepin-4(5H)-yl]ethan-1-one, Bromodomain-containing protein 4
著者Johnson, J.A, Pomerantz, W.C.K.
登録日2019-11-03
公開日2020-01-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Evaluating the Advantages of Using 3D-Enriched Fragments for Targeting BET Bromodomains.
Acs Med.Chem.Lett., 10, 2019
2X3H
DownloadVisualize
BU of 2x3h by Molmil
COLIPHAGE K5A LYASE
分子名称: BROMIDE ION, K5 LYASE
著者Thompson, J.E, Pourhossein, M, Goldrick, M, Hudson, T, Derrick, J.P, Roberts, I.S.
登録日2010-02-04
公開日2010-06-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The K5 Lyase Kfla Combines a Viral Tail Spike Structure with a Bacterial Polysaccharide Lyase Mechanism.
J.Biol.Chem., 285, 2010
3BZM
DownloadVisualize
BU of 3bzm by Molmil
Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF
分子名称: CITRIC ACID, Menaquinone-specific isochorismate synthase
著者Parsons, J.F, Shi, K.M, Ladner, J.E.
登録日2008-01-18
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structure of isochorismate synthase in complex with magnesium.
Acta Crystallogr.,Sect.D, 64, 2008
3BZN
DownloadVisualize
BU of 3bzn by Molmil
Crystal Structure of Open form of Menaquinone-Specific Isochorismate Synthase, MenF
分子名称: MAGNESIUM ION, Menaquinone-specific isochorismate synthase, SULFATE ION
著者Parsons, J.F, Shi, K.M, Ladner, J.E.
登録日2008-01-18
公開日2008-05-20
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of isochorismate synthase in complex with magnesium.
Acta Crystallogr.,Sect.D, 64, 2008
2FO1
DownloadVisualize
BU of 2fo1 by Molmil
Crystal Structure of the CSL-Notch-Mastermind ternary complex bound to DNA
分子名称: 5'-D(*AP*AP*TP*CP*TP*TP*TP*CP*CP*CP*AP*CP*AP*GP*T)-3', 5'-D(*TP*TP*AP*CP*TP*GP*TP*GP*GP*GP*AP*AP*AP*GP*A)-3', Lin-12 and glp-1 phenotype protein 1, ...
著者Wilson, J.J, Kovall, R.A.
登録日2006-01-12
公開日2006-03-21
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (3.12 Å)
主引用文献Crystal structure of the CSL-Notch-Mastermind ternary complex bound to DNA.
Cell(Cambridge,Mass.), 124, 2006
8THS
DownloadVisualize
BU of 8ths by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA A69T
分子名称: DI(HYDROXYETHYL)ETHER, KAEDE-TYPE RED FLUORESCENT PROTEIN, LEA A69T, ...
著者Henderson, J.N, Mills, J.H.
登録日2023-07-17
公開日2023-11-29
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins.
Front Chem, 11, 2023
8GES
DownloadVisualize
BU of 8ges by Molmil
R. hominis 2 beta-glucuronidase bound to UNC10201652-glucuronide
分子名称: 8-(4-beta-D-glucopyranuronosylpiperazin-1-yl)-5-(morpholin-4-yl)-1,2,3,4-tetrahydro[1,2,3]triazino[4',5':4,5]thieno[2,3 -c]isoquinoline, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
著者Simpson, J.B, Redinbo, M.R.
登録日2023-03-07
公開日2024-02-14
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Diverse Human Therapeutics Impact Hormone and Neurotransmitter Homeostasis by Inhibiting Gut Microbial Enzymes
To Be Published
6BJZ
DownloadVisualize
BU of 6bjz by Molmil
Crystal Structure of the Fab fragment of humanized 5c8 antibody containing the fluorescent non-canonical amino acid L-(7-hydroxycoumarin-4-yl)ethylglycine at pH 5.5
分子名称: 5c8 Fab Heavy chain, 5c8 Fab Light chain
著者Henderson, J.N, Simmons, C.R, Mills, J.H.
登録日2017-11-07
公開日2018-11-14
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Insights into How Protein Environments Tune the Spectroscopic Properties of a Noncanonical Amino Acid Fluorophore.
Biochemistry, 59, 2020
1A6C
DownloadVisualize
BU of 1a6c by Molmil
STRUCTURE OF TOBACCO RINGSPOT VIRUS
分子名称: TOBACCO RINGSPOT VIRUS CAPSID PROTEIN
著者Johnson, J.E, Chandrasekar, V.
登録日1998-02-23
公開日1998-07-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献The structure of tobacco ringspot virus: a link in the evolution of icosahedral capsids in the picornavirus superfamily.
Structure, 6, 1998
8UB6
DownloadVisualize
BU of 8ub6 by Molmil
Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, LEA H62X, containing 3-methylhistidine at position 62
分子名称: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS
著者Henderson, J.N, Mills, J.H.
登録日2023-09-22
公開日2023-11-29
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Capturing excited-state structural snapshots of evolutionary green-to-red photochromic fluorescent proteins.
Front Chem, 11, 2023
8U8J
DownloadVisualize
BU of 8u8j by Molmil
Co-crystal structure of phosphorylated ERK2 in complex with ERK1/2 inhibitor #16
分子名称: (4M)-4-{(4R)-3-[(2S)-2-methylbutyl][1,2,4]triazolo[4,3-a]pyridin-7-yl}-N-(1-methyl-1H-pyrazol-5-yl)pyrimidin-2-amine, Mitogen-activated protein kinase 1
著者Anderson, J.W, Vigers, G.P.
登録日2023-09-18
公開日2024-03-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformation selection by ATP-competitive inhibitors and allosteric communication in ERK2.
Elife, 12, 2024
8U8K
DownloadVisualize
BU of 8u8k by Molmil
Co-crystal structure of phosphorylated ERK2 in complex with ERK1/2 inhibitor #8
分子名称: (4M)-4-{(4S)-3-[(2-chloropyridin-3-yl)methyl][1,2,4]triazolo[4,3-a]pyridin-7-yl}-N-(oxan-4-yl)pyrimidin-2-amine, Mitogen-activated protein kinase 1
著者Anderson, J.W, Vigers, G.P.
登録日2023-09-18
公開日2024-03-27
最終更新日2024-04-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Conformation selection by ATP-competitive inhibitors and allosteric communication in ERK2.
Elife, 12, 2024
8U1S
DownloadVisualize
BU of 8u1s by Molmil
A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Neuraminidase, mAb-393 heavy chain, ...
著者Ferguson, J.A, Raghavan, S.S.R, Ward, A.B.
登録日2023-09-02
公開日2024-03-27
実験手法ELECTRON MICROSCOPY (3.21 Å)
主引用文献A mechanistic understanding of protective influenza B neuraminidase mAbs at the airway interface
To Be Published
1NQD
DownloadVisualize
BU of 1nqd by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.65 ANGSTROM RESOLUTION IN PRESENCE OF CALCIUM
分子名称: CALCIUM ION, class 1 collagenase
著者Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
登録日2003-01-21
公開日2003-04-15
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献A Bacterial Collagen-Binding Domain with Novel Calcium-Binding Motif Controls Domain Orientation
Embo J., 22, 2003
1SBX
DownloadVisualize
BU of 1sbx by Molmil
Crystal structure of the Dachshund-homology domain of human SKI
分子名称: Ski oncogene
著者Wilson, J.J, Malakhova, M, Zhang, R, Joachimiak, A, Hegde, R.S.
登録日2004-02-11
公開日2004-05-25
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal Structure of the Dachshund Homology Domain of human SKI
Structure, 12, 2004
1NQJ
DownloadVisualize
BU of 1nqj by Molmil
CRYSTAL STRUCTURE OF CLOSTRIDIUM HISTOLYTICUM COLG COLLAGENASE COLLAGEN-BINDING DOMAIN 3B AT 1.0 ANGSTROM RESOLUTION IN ABSENCE OF CALCIUM
分子名称: CHLORIDE ION, LITHIUM ION, class 1 collagenase
著者Wilson, J.J, Matsushita, O, Okabe, A, Sakon, J.
登録日2003-01-21
公開日2003-04-15
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献A bacterial collagen-binding domain with novel calcium-binding motif controls domain orientation
Embo J., 22, 2003
8W1N
DownloadVisualize
BU of 8w1n by Molmil
Structure of transthyretin pathogenic mutation A120S
分子名称: Transthyretin
著者Ferguson, J.A, Stanfield, R.L, Wright, P.E.
登録日2024-02-16
公開日2024-02-28
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The mispacked F87 sidechain drives aggregation-promoting conformational fluctuations in transthyretin
To Be Published

222036

件を2024-07-03に公開中

PDB statisticsPDBj update infoContact PDBjnumon