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PDB: 1138 件
7YE8
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BU of 7ye8 by Molmil
Crystal structure of SARS-CoV-2 refolded dimeric ORF9b
分子名称: N-OCTANE, ORF9b protein
著者Jin, X, Chai, Y, Qi, J, Song, H, Gao, G.F.
登録日2022-07-05
公開日2022-10-19
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structural characterization of SARS-CoV-2 dimeric ORF9b reveals potential fold-switching trigger mechanism.
Sci China Life Sci, 66, 2023
6LXK
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BU of 6lxk by Molmil
Crystal structure of Z2B3 D102R Fab in complex with influenza virus neuraminidase from A/Serbia/NS-601/2014 (H1N1)
分子名称: CALCIUM ION, Heavy chain of Z2B3-D102R Fab, Light chain of Z2B3-D102R Fab, ...
著者Jiang, H, Peng, W, Qi, J, Chai, Y, Song, H, Shi, Y, Gao, G.F, Wu, Y.
登録日2020-02-11
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.608 Å)
主引用文献Structure-Based Modification of an Anti-neuraminidase Human Antibody Restores Protection Efficacy against the Drifted Influenza Virus.
Mbio, 11, 2020
6LXJ
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BU of 6lxj by Molmil
Crystal structure of human Z2B3 Fab in complex with influenza virus neuraminidase from A/Anhui/1/2013 (H7N9)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Heavy chain of Z2B3 Fab, ...
著者Jiang, H, Peng, W, Qi, J, Chai, Y, Song, H, Shi, Y, Gao, G.F, Wu, Y.
登録日2020-02-11
公開日2020-12-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.903 Å)
主引用文献Structure-Based Modification of an Anti-neuraminidase Human Antibody Restores Protection Efficacy against the Drifted Influenza Virus.
Mbio, 11, 2020
6MJR
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BU of 6mjr by Molmil
Azurin 122W/124F/126Re
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
著者Takematsu, K, Zalis, S, Gray, H.B, Vlcek, A, Winkler, J.R, Williamson, H, Kaiser, J.T, Heyda, J, Hollas, D.
登録日2018-09-21
公開日2019-02-20
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.012 Å)
主引用文献Two Tryptophans Are Better Than One in Accelerating Electron Flow through a Protein.
ACS Cent Sci, 5, 2019
6MJT
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BU of 6mjt by Molmil
Azurin 122F/124W/126Re
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
著者Takematsu, K, Zalis, S, Gray, H.B, Vlcek, A, Winkler, J.R, Williamson, H, Kaiser, J.T, Heyda, J, Hollas, D.
登録日2018-09-21
公開日2019-02-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.893 Å)
主引用文献Two Tryptophans Are Better Than One in Accelerating Electron Flow through a Protein.
ACS Cent Sci, 5, 2019
5GN0
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BU of 5gn0 by Molmil
Structure of TAZ-TEAD complex
分子名称: CITRIC ACID, PALMITIC ACID, Transcriptional enhancer factor TEF-3, ...
著者Kaan, H.Y.K, Song, H.
登録日2016-07-18
公開日2017-05-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of TAZ-TEAD complex reveals a distinct interaction mode from that of YAP-TEAD complex
Sci Rep, 7, 2017
7MPO
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BU of 7mpo by Molmil
Bartonella henselae NrnC bound to pAp
分子名称: ADENOSINE-3'-5'-DIPHOSPHATE, NanoRNase C
著者Lormand, J.D, Sondermann, H.
登録日2021-05-04
公開日2021-09-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Structural characterization of NrnC identifies unifying features of dinucleotidases.
Elife, 10, 2021
6MJS
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BU of 6mjs by Molmil
Azurin 122W/124W/126Re
分子名称: (1,10 PHENANTHROLINE)-(TRI-CARBON MONOXIDE) RHENIUM (I), Azurin, COPPER (II) ION
著者Takematsu, K, Zalis, S, Gray, H.B, Vlcek, A, Winkler, J.R, Williamson, H, Kaiser, J.T, Heyda, J, Hollas, D.
登録日2018-09-21
公開日2019-02-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Two Tryptophans Are Better Than One in Accelerating Electron Flow through a Protein.
ACS Cent Sci, 5, 2019
5DMR
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BU of 5dmr by Molmil
Crystal Structure of C-terminal domain of mouse eRF1 in complex with RNase H domain of RT of Moloney Murine Leukemia Virus
分子名称: Eukaryotic peptide chain release factor subunit 1, Reverse transcriptase/ribonuclease H p80
著者Tang, X, Song, H.
登録日2015-09-09
公開日2016-07-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of suppression of host translation termination by Moloney Murine Leukemia Virus
Nat Commun, 7, 2016
5XV1
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BU of 5xv1 by Molmil
Crystal structure of ATG101-ATG13HORMA
分子名称: Autophagy-related protein 101, Autophagy-related protein 13
著者Kim, B.-W, Song, H.K.
登録日2017-06-26
公開日2018-07-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.508 Å)
主引用文献Crystal structure of ATG101-ATG13HORMA
To Be Published
3ZZ1
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BU of 3zz1 by Molmil
Crystal structure of a glycoside hydrolase family 3 beta-glucosidase, Bgl1 from Hypocrea jecorina at 2.1A resolution.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCOSIDE GLUCOHYDROLASE, GLYCEROL
著者Sandgren, M, Kaper, T, Mikkelsen, N.E, Hansson, H, Piens, K, Gudmundsson, M, Larenas, E, Kelemen, B, Karkehabadi, S.
登録日2011-08-31
公開日2012-12-12
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Biochemical Characterization and Crystal Structures of a Fungal Family 3 Beta-Glucosidase, Cel3A from Hypocrea Jecorina.
J.Biol.Chem., 289, 2014
6LZG
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BU of 6lzg by Molmil
Structure of novel coronavirus spike receptor-binding domain complexed with its receptor ACE2
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Angiotensin-converting enzyme 2, Spike protein S1, ...
著者Wang, Q.H, Song, H, Qi, J.X.
登録日2020-02-19
公開日2020-03-18
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and Functional Basis of SARS-CoV-2 Entry by Using Human ACE2.
Cell, 181, 2020
3M3A
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BU of 3m3a by Molmil
The roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin: Cu(II)-I107E FeBMb (Cu(II) binding to FeB site)
分子名称: COPPER (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.37 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
3M39
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The roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin: Fe(II)-I107E FeBMb (Fe(II) binding to FeB site)
分子名称: FE (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
6SJ4
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BU of 6sj4 by Molmil
Amidohydrolase, AHS with substrate analog
分子名称: 1,2-ETHANEDIOL, 3-(3-hydroxyphenyl)carbonyloxybenzoic acid, Amidohydrolase, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
3M38
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BU of 3m38 by Molmil
The roles of Glutamates and Metal ions in a rationally designed nitric oxide reductase based on myoglobin: I107E FeBMb (No metal ion binding to FeB site)
分子名称: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
著者Lin, Y.-W, Yeung, N, Gao, Y.-G, Miner, K.D, Tian, S, Robinson, H, Lu, Y.
登録日2010-03-08
公開日2010-05-12
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Roles of glutamates and metal ions in a rationally designed nitric oxide reductase based on myoglobin.
Proc.Natl.Acad.Sci.USA, 107, 2010
6SJ0
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BU of 6sj0 by Molmil
Amidohydrolase, AHS
分子名称: Amidohydrolase, BICARBONATE ION, DI(HYDROXYETHYL)ETHER, ...
著者Naismith, J.H, Song, H.
登録日2019-08-12
公開日2020-01-15
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The Biosynthesis of the Benzoxazole in Nataxazole Proceeds via an Unstable Ester and has Synthetic Utility.
Angew.Chem.Int.Ed.Engl., 59, 2020
6N6K
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BU of 6n6k by Molmil
Human REXO2 bound to pAG
分子名称: MALONATE ION, RNA (5'-R(P*AP*G)-3'), RNA exonuclease 2 homolog,Small fragment nuclease, ...
著者Lormand, J.D, Sondermann, H.
登録日2018-11-26
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.418 Å)
主引用文献A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
3MCA
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BU of 3mca by Molmil
Structure of the Dom34-Hbs1 Complex and implications for its role in No-Go decay
分子名称: Elongation factor 1 alpha-like protein, Protein dom34
著者Chen, L, Song, H.
登録日2010-03-28
公開日2010-10-06
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.74 Å)
主引用文献Structure of the Dom34-Hbs1 complex and implications for no-go decay
Nat.Struct.Mol.Biol., 17, 2010
2VTC
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BU of 2vtc by Molmil
The structure of a glycoside hydrolase family 61 member, Cel61B from the Hypocrea jecorina.
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CEL61B, NICKEL (II) ION
著者Karkehabadi, S, Hansson, H, Kim, S, Piens, K, Mitchinson, C, Sandgren, M.
登録日2008-05-14
公開日2008-09-09
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The First Structure of a Glycoside Hydrolase Family 61 Member, Cel61B from the Hypocrea Jecorina, at 1.6 A Resolution.
J.Mol.Biol., 383, 2008
6N6I
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BU of 6n6i by Molmil
Human REXO2 bound to pGG
分子名称: 1,2-ETHANEDIOL, GLYCEROL, MALONATE ION, ...
著者Lormand, J.D, Sondermann, H.
登録日2018-11-26
公開日2019-06-12
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.431 Å)
主引用文献A dedicated diribonucleotidase resolves a key bottleneck for the terminal step of RNA degradation.
Elife, 8, 2019
3NIH
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BU of 3nih by Molmil
The structure of UBR box (RIAAA)
分子名称: E3 ubiquitin-protein ligase UBR1, Peptide RIAAA, ZINC ION
著者Choi, W.S, Jeong, B.-C, Lee, M.-R, Song, H.K.
登録日2010-06-16
公開日2010-09-15
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the recognition of N-end rule substrates by the UBR box of ubiquitin ligases
Nat.Struct.Mol.Biol., 17, 2010
6WJB
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BU of 6wjb by Molmil
UDP-GlcNAc C4-epimerase from Pseudomonas protegens in complex with NAD and UDP-GlcNAc
分子名称: NAD-dependent epimerase/dehydratase family protein, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, URIDINE-DIPHOSPHATE-N-ACETYLGLUCOSAMINE
著者Marmont, L.S, Pfoh, R, Robinson, H, Howell, P.L.
登録日2020-04-13
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献PelX is a UDP-N-acetylglucosamine C4-epimerase involved in Pel polysaccharide-dependent biofilm formation.
J.Biol.Chem., 295, 2020
8BBQ
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BU of 8bbq by Molmil
Determination of the structure of active tyrosinase from bacterium Verrucomicrobium spinosum
分子名称: COPPER (II) ION, Core tyrosinase, GLYCEROL, ...
著者Fekry, M, Dave, K, Badgujar, D, Aurelius, O, Hamnevik, E, Dobritzsch, D, Danielson, H.
登録日2022-10-14
公開日2023-09-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.43 Å)
主引用文献The Crystal Structure of Tyrosinase from Verrucomicrobium spinosum Reveals It to Be an Atypical Bacterial Tyrosinase.
Biomolecules, 13, 2023
8BBR
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BU of 8bbr by Molmil
Determination of the structure of active tyrosinase from bacterium Verrucomicrobium spinosum
分子名称: COPPER (II) ION, Core tyrosinase, SULFATE ION
著者Fekry, M, Dave, K, Badgujar, D, Aurelius, O, Hamnevik, E, Dobritzsch, D, Danielson, H.
登録日2022-10-14
公開日2023-09-20
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献The Crystal Structure of Tyrosinase from Verrucomicrobium spinosum Reveals It to Be an Atypical Bacterial Tyrosinase.
Biomolecules, 13, 2023

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