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PDB: 24 results

2N7E
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Solution structure of the UBL domain of yeast Ddi1
Descriptor: DNA damage-inducible protein 1
Authors:Siva, M, Grantz Saskova, K, Veverka, V.
Deposit date:2015-09-09
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural studies of the yeast DNA damage-inducible protein Ddi1 reveal domain architecture of this eukaryotic protein family.
Sci Rep, 6, 2016
2N7D
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Solution structure of the UBL domain of human Ddi2
Descriptor: Protein DDI1 homolog 2
Authors:Siva, M, Grantz Saskova, K, Veverka, V.
Deposit date:2015-09-08
Release date:2016-07-20
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Human DNA-Damage-Inducible 2 Protein Is Structurally and Functionally Distinct from Its Yeast Ortholog.
Sci Rep, 6, 2016
6CYM
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Reversible Covalent Direct Thrombin Inhibitors
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-methoxybenzoic acid, Prothrombin, ...
Authors:Sivaraja, M, Williams, D.C.
Deposit date:2018-04-06
Release date:2018-05-09
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Reversible covalent direct thrombin inhibitors.
PLoS ONE, 13, 2018
1HDP
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SOLUTION STRUCTURE OF A POU-SPECIFIC HOMEODOMAIN: 3D-NMR STUDIES OF HUMAN B-CELL TRANSCRIPTION FACTOR OCT-2
Descriptor: OCT-2 POU HOMEODOMAIN
Authors:Sivaraja, M, Botfield, M.C, Mueller, M, Jancso, A, Weiss, M.A.
Deposit date:1994-03-08
Release date:1995-01-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of a POU-specific homeodomain: 3D-NMR studies of human B-cell transcription factor Oct-2.
Biochemistry, 33, 1994
2FJI
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Crystal structure of the C-terminal domain of the exocyst subunit Sec6p
Descriptor: Exocyst complex component SEC6
Authors:Sivaram, M.V, Munson, M.
Deposit date:2006-01-02
Release date:2006-05-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The structure of the exocyst subunit Sec6p defines a conserved architecture with diverse roles.
Nat.Struct.Mol.Biol., 13, 2006
1MF4
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Structure-based design of potent and selective inhibitors of phospholipase A2: Crystal structure of the complex formed between phosholipase A2 from Naja Naja sagittifera and a designed peptide inhibitor at 1.9 A resolution
Descriptor: CALCIUM ION, Phospholipase A2, VAL-ALA-PHE-ARG-SER
Authors:Singh, R.K, Vikram, P, Paramsivam, M, Jabeen, T, Sharma, S, Makker, J, Dey, S, Kaur, P, Srinivasan, A, Singh, T.P.
Deposit date:2002-08-09
Release date:2003-09-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Design of specific peptide inhibitors for group I phospholipase A2: structure of a complex formed between phospholipase A2 from Naja naja sagittifera (group I) and a designed peptide inhibitor Val-Ala-Phe-Arg-Ser (VAFRS) at 1.9 A resolution reveals unique features
Biochemistry, 42, 2003
5NEV
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CDK2/Cyclin A in complex with compound 73
Descriptor: 4-[[6-(3-phenylphenyl)-7~{H}-purin-2-yl]amino]benzenesulfonamide, Cyclin-A2, Cyclin-dependent kinase 2
Authors:Coxon, C.R, Anscombe, E, Harnor, S.J, Martin, M.P, Carbain, B, Hardcastle, I.R, Harlow, L.K, Korolchuk, S, Matheson, C.J, Noble, M.E.M, Newell, D.R, Turner, D, Sivaprakasam, M, Wang, L.Z, Wong, C, Golding, B.T, Griffin, R.J, Cano, G.
Deposit date:2017-03-12
Release date:2017-03-29
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.97 Å)
Cite:Cyclin-Dependent Kinase (CDK) Inhibitors: Structure-Activity Relationships and Insights into the CDK-2 Selectivity of 6-Substituted 2-Arylaminopurines.
J. Med. Chem., 60, 2017
5LQF
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CDK1/CyclinB1/CKS2 in complex with NU6102
Descriptor: Cyclin-dependent kinase 1, Cyclin-dependent kinases regulatory subunit 2, G2/mitotic-specific cyclin-B1, ...
Authors:Coxon, C.R, Anscombe, E, Harnor, S.J, Martin, M.P, Carbain, B.J, Hardcastle, I.R, Harlow, L.K, Korolchuk, S, Matheson, C.J, Noble, M.E, Newell, D.R, Turner, D.M, Sivaprakasam, M, Wang, L.Z, Wong, C, Golding, B.T, Griffin, R.J, Endicott, J.A, Cano, C.
Deposit date:2016-08-17
Release date:2017-01-11
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Cyclin-Dependent Kinase (CDK) Inhibitors: Structure-Activity Relationships and Insights into the CDK-2 Selectivity of 6-Substituted 2-Arylaminopurines.
J. Med. Chem., 60, 2017
1G2X
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Sequence induced trimerization of krait PLA2: crystal structure of the trimeric form of krait PLA2
Descriptor: PHOSPHOLIPASE A2
Authors:Singh, G, Gourinath, S, Sharma, S, Bhanumathi, S, Paramsivam, M, Singh, T.P.
Deposit date:2000-10-22
Release date:2003-06-17
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Sequence-induced trimerization of phospholipase A2: structure of a trimeric isoform of PLA2 from common krait (Bungarus caeruleus) at 2.5 A resolution.
Acta Crystallogr.,Sect.F, 61, 2005
1FE5
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SEQUENCE AND CRYSTAL STRUCTURE OF A BASIC PHOSPHOLIPASE A2 FROM COMMON KRAIT (BUNGARUS CAERULEUS) AT 2.4 RESOLUTION: IDENTIFICATION AND CHARACTERIZATION OF ITS PHARMACOLOGICAL SITES.
Descriptor: CALCIUM ION, PHOSPHOLIPASE A2
Authors:Singh, G, Gourinath, S, Sharma, S, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:2000-07-21
Release date:2001-01-24
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Sequence and crystal structure determination of a basic phospholipase A2 from common krait (Bungarus caeruleus) at 2.4 A resolution: identification and characterization of its pharmacological sites.
J.Mol.Biol., 307, 2001
1DQ7
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THREE-DIMENSIONAL STRUCTURE OF A NEUROTOXIN FROM RED SCORPION (BUTHUS TAMULUS) AT 2.2A RESOLUTION.
Descriptor: NEUROTOXIN
Authors:Sharma, M, Yadav, S, Karthikeyan, S, Kumar, S, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:1999-12-30
Release date:2000-12-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional Structure of a Neurotoxin from Red Scorpion (Buthus tamulus) at 2.2A Resolution
To be Published
1DTZ
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STRUCTURE OF CAMEL APO-LACTOFERRIN DEMONSTRATES ITS DUAL ROLE IN SEQUESTERING AND TRANSPORTING FERRIC IONS SIMULTANEOUSLY:CRYSTAL STRUCTURE OF CAMEL APO-LACTOFERRIN AT 2.6A RESOLUTION.
Descriptor: APO LACTOFERRIN
Authors:Khan, J.A, Kumar, P, Paramasivam, M, Srinivasan, A, Yadav, R.S, Sahani, M.S, Singh, T.P.
Deposit date:2000-01-13
Release date:2001-06-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Camel lactoferrin, a transferrin-cum-lactoferrin: crystal structure of camel apolactoferrin at 2.6 A resolution and structural basis of its dual role.
J.Mol.Biol., 309, 2001
1TFM
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CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM
Descriptor: 2-AMINO-4-ISOPROPYL-PTERIDINE-6-CARBOXYLIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Mishra, V, Bilgrami, S, Paramasivam, M, Yadav, S, Sharma, R.S, Kaur, P, Srinivasan, A, Babu, C.R, Singh, T.P.
Deposit date:2004-05-27
Release date:2004-07-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:CRYSTAL STRUCTURE OF A RIBOSOME INACTIVATING PROTEIN IN ITS NATURALLY INHIBITED FORM
To be Published
1CE2
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STRUCTURE OF DIFERRIC BUFFALO LACTOFERRIN AT 2.5A RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, PROTEIN (LACTOFERRIN)
Authors:Karthikeyan, S, Paramasivam, M, Yadav, S, Srinivasan, A, Singh, T.P.
Deposit date:1999-03-13
Release date:1999-03-19
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of buffalo lactoferrin at 2.5 A resolution using crystals grown at 303 K shows different orientations of the N and C lobes.
Acta Crystallogr.,Sect.D, 55, 1999
1OZ7
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Crystal structure of Echicetin from the venom of Indian saw-scaled viper (Echis carinatus) at 2.4 resolution
Descriptor: echicetin A-chain, echicetin B-chain
Authors:Jasti, J, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:2003-04-08
Release date:2003-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of echicetin from Echis carinatus (Indian saw-scaled viper) at 2.4A resolution.
J.Mol.Biol., 335, 2004
6K5Q
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Crystal structure of lysozyme complexed with a bioactive compound from Jatropha gossypiifolia
Descriptor: ACETATE ION, GLYCEROL, Lysozyme C, ...
Authors:Kanal Elamparithi, B, Ankur, T, Sivakumar, M, Gunasekaran, K.
Deposit date:2019-05-30
Release date:2020-05-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.177 Å)
Cite:Crystal structure of lysozyme complexed with a bioactive compound from Jatropha gossypiifolia
To Be Published
1XXW
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Structure of zinc induced heterodimer of two calcium free isoforms of phospholipase A2 from Naja naja sagittifera at 2.7A resolution
Descriptor: ACETIC ACID, Phospholipase A2 isoform 1, Phospholipase A2 isoform 2, ...
Authors:Jabeen, T, Sharma, S, Singh, N, Singh, R.K, Verma, A.K, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:2004-11-09
Release date:2005-03-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the zinc-induced heterodimer of two calcium-free isoforms of phospholipase A2 from Naja naja sagittifera at 2.7 angstroms resolution.
Acta Crystallogr.,Sect.D, 61, 2005
1OZ6
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X-ray structure of acidic phospholipase A2 from Indian saw-scaled viper (Echis carinatus) with a potent platelet aggregation inhibitory activity
Descriptor: CALCIUM ION, phospholipase A2
Authors:Jasti, J, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:2003-04-08
Release date:2003-12-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of an acidic phospholipase A2 from Indian saw-scaled viper (Echis carinatus) at 2.6 A resolution reveals a novel intermolecular interaction.
Acta Crystallogr.,Sect.D, 60, 2004
1N76
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CRYSTAL STRUCTURE OF HUMAN SEMINAL LACTOFERRIN AT 3.4 A RESOLUTION
Descriptor: CARBONATE ION, FE (III) ION, LACTOFERRIN, ...
Authors:Kumar, J, Weber, W, Munchau, S, Yadav, S, Singh, S.B, Sarvanan, K, Paramsivam, M, Sharma, S, Kaur, P, Bhushan, A, Srinivasan, A, Betzel, C, Singh, T.P.
Deposit date:2002-11-12
Release date:2003-02-18
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Crystal Structure of human seminal lactoferrin at 3.4A resolution
Indian J.Biochem.Biophys., 40, 2003
1DPY
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THREE-DIMENSIONAL STRUCTURE OF A NOVEL PHOSPHOLIPASE A2 FROM INDIAN COMMON KRAIT AT 2.45 A RESOLUTION
Descriptor: PHOSPHOLIPASE A2, SODIUM ION
Authors:Singh, G, Gourinath, S, Sharma, S, Paramasivam, M, Srinivasan, A, Singh, T.P.
Deposit date:1999-12-28
Release date:2000-06-28
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Sequence and crystal structure determination of a basic phospholipase A2 from common krait (Bungarus caeruleus) at 2.4 A resolution: identification and characterization of its pharmacological sites.
J.Mol.Biol., 307, 2001
1LJY
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Crystal Structure of a Novel Regulatory 40 kDa Mammary Gland Protein (MGP-40) secreted during Involution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MGP-40
Authors:Mohanty, A.K, Singh, G, Paramasivam, M, Saravanan, K, Jabeen, T, Sharma, S, Yadav, S, Kaur, P, Kumar, P, Srinivasan, A, Singh, T.P.
Deposit date:2002-04-23
Release date:2003-03-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of a Novel Regulatory 40 kDa Mammary Gland Protein (MGP-40) secreted during Involution
J.Biol.Chem., 278, 2003
1LN8
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Crystal Structure of a New Isoform of Phospholipase A2 from Naja naja sagittifera at 1.6 A Resolution
Descriptor: CALCIUM ION, PHOSPHATE ION, Phospholipase A2
Authors:Singh, R.K, Vikram, P, Paramasivam, M, Jabeen, T, Sharma, S, Kaur, P, Srinivasan, A, Singh, T.P.
Deposit date:2002-05-03
Release date:2003-05-20
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of a New Form of Phospholipase A2 from Naja naja sagittifera at 1.6 A Resolution
to be published
1MH2
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Crystal Structure of a Zinc Containing Dimer of Phospholipase A2 from the Venom of Indian Cobra (Naja Naja Sagittifera)
Descriptor: ACETIC ACID, PHOSPHOLIPASE A2, ZINC ION
Authors:Jabeen, T, Varma, A.K, Paramasivam, M, Singh, N, Singh, R.K, Sharma, S, Srinivasan, A, Singh, T.P.
Deposit date:2002-08-19
Release date:2003-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structure of a Zinc Containing Dimer of Phospholipase A2 from the Venom of Indian cobra (Naja Naja Saggittifera)
To be Published
1PC8
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Crystal Structure of a novel form of mistletoe lectin from Himalayan Viscum album L. at 3.8A resolution
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Himalayan mistletoe ribosome-inactivating protein, ...
Authors:Mishra, V, Ethayathulla, A.S, Paramasivam, M, Singh, G, Yadav, S, Kaur, P, Sharma, R.S, Babu, C.R, Singh, T.P.
Deposit date:2003-05-16
Release date:2004-06-22
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Structure of a novel ribosome-inactivating protein from a hemi-parasitic plant inhabiting the northwestern Himalayas.
Acta Crystallogr.,Sect.D, 60, 2004

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