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PDB: 111 results

3LL4
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BU of 3ll4 by Molmil
Structure of the H13A mutant of Ykr043C in complex with fructose-1,6-bisphosphate
Descriptor: 1,6-FRUCTOSE DIPHOSPHATE (LINEAR FORM), Uncharacterized protein YKR043C
Authors:Singer, A, Xu, X, Cui, H, Dong, A, Stogios, P.J, Edwards, A.M, Joachimiak, A, Savchenko, A, Yakunin, A.F, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-28
Release date:2010-03-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.49 Å)
Cite:Structure and activity of the metal-independent fructose-1,6-bisphosphatase YK23 from Saccharomyces cerevisiae.
J.Biol.Chem., 285, 2010
3LG2
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BU of 3lg2 by Molmil
A Ykr043C/ fructose-1,6-bisphosphate product complex following ligand soaking
Descriptor: PHOSPHATE ION, Uncharacterized protein YKR043C
Authors:Singer, A, Xu, X, Cui, H, Dong, A, Edwards, A.M, Joachimiak, A, Yakunin, A.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-19
Release date:2010-03-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and activity of the metal-independent fructose-1,6-bisphosphatase YK23 from Saccharomyces cerevisiae.
J.Biol.Chem., 285, 2010
2HXR
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BU of 2hxr by Molmil
Structure of the ligand binding domain of E. coli CynR, a transcriptional regulator controlling cyanate metabolism
Descriptor: HTH-type transcriptional regulator cynR
Authors:Singer, A.U, Cuff, M.E, Evdokimova, E, Kagan, O, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2006-08-03
Release date:2006-08-22
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:The structure of CynR, a transcriptional regulator, both in the presence and absence of sodium azide, its activator ligand
To be Published
8UX6
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BU of 8ux6 by Molmil
Structure of Fab201 with a T. parva sporozoite neutralizing B cell epitope of p67
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CALCIUM ION, ...
Authors:Singer, A.U, Gopalsamy, A, Fellouse, F.A, Miersch, S, Sidhu, S.S.
Deposit date:2023-11-08
Release date:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Molecular characterization of a novel conformational sporozoite neutralizing B cell epitope in p67 of Theileria parva
To Be Published
8VVM
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BU of 8vvm by Molmil
Structure of FabS1CE1-EPR1-1 in complex with the erythropoietin receptor
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-31
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VTR
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BU of 8vtr by Molmil
Structure of FabS1CE3-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor (orthorhombic form)
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, CITRIC ACID, ...
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-26
Release date:2024-07-10
Last modified:2024-07-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VU4
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BU of 8vu4 by Molmil
Structure of FabS1CE4-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-28
Release date:2024-07-10
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VTP
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BU of 8vtp by Molmil
Structure of FabS1CE-EPR-1, a high affinity antibody for the erythropoeitin receptor
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, AMMONIUM ION, ...
Authors:Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-26
Release date:2024-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VVO
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BU of 8vvo by Molmil
Structure of FabS1CE2-EPR1-1 in complex with the erythropoietin receptor
Descriptor: CHLORIDE ION, Erythropoietin receptor, S1CE2 VARIANT OF FAB-EPR-1 heavy chain, ...
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-31
Release date:2024-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VU1
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BU of 8vu1 by Molmil
Structure of FabS1CE3-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor (trigonal form)
Descriptor: S1CE3 VARIANT OF FAB-EPR-1 heavy chain, S1CE3 VARIANT OF FAB-EPR-1 light chain
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-27
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.08 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VUC
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BU of 8vuc by Molmil
Structure of FabS1CE2-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, S1CE2 VARIANT OF FAB-EPR-1 heavy chain, ...
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VUI
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BU of 8vui by Molmil
Structure of FabS1CE-EPR-1, an elbow-locked Fab, in complex with the erythropoeitin receptor
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, AMMONIUM ION, ...
Authors:Singer, A.U, Bruce, H.A, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-29
Release date:2024-07-10
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
8VUA
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BU of 8vua by Molmil
Structure of FabS1CE1-EPR-1, an elbow-locked high affinity antibody for the erythropoeitin receptor
Descriptor: S1CE1 VARIANT OF FAB-EPR-1 heavy chain, S1CE1 VARIANT OF FAB-EPR-1 light chain
Authors:Singer, A.U, Bruce, H.A, Pavlenco, A, Ploder, L, Luu, G, Blazer, L, Adams, J.J, Sidhu, S.S.
Deposit date:2024-01-29
Release date:2024-07-10
Method:X-RAY DIFFRACTION (3.27 Å)
Cite:Antigen-binding fragments with improved crystal lattice packing and enhanced conformational flexibility at the elbow region as crystallization chaperones.
Protein Sci., 33, 2024
2PYU
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BU of 2pyu by Molmil
Structure of the E. coli inosine triphosphate pyrophosphatase RgdB in complex with IMP
Descriptor: 1,2-ETHANEDIOL, INOSINIC ACID, Inosine Triphosphate Pyrophosphatase RdgB
Authors:Singer, A.U, Proudfoot, M, Skarina, T, Savchenko, A, Yakunin, A.F.
Deposit date:2007-05-16
Release date:2008-03-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Molecular basis of the antimutagenic activity of the house-cleaning inosine triphosphate pyrophosphatase RdgB from Escherichia coli.
J.Mol.Biol., 374, 2007
8T9B
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BU of 8t9b by Molmil
Structure of the CK variant of Fab F1 (FabC-F1) in complex with the C-terminal FN3 domain of EphA2
Descriptor: CK variant of Fab F1 heavy chain, CK variant of Fab F1 light chain, Ephrin type-A receptor 2
Authors:Singer, A.U, Bruce, H.A, Enderle, L, Blazer, L, Adams, J.J, Sicheri, F, Sidhu, S.S.
Deposit date:2023-06-23
Release date:2024-05-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Engineered Antigen-binding Fragments for Enhanced Crystallization of Antibody:Antigen Complexes
To be Published
3QVQ
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BU of 3qvq by Molmil
The structure of an Oleispira antarctica phosphodiesterase OLEI02445 in complex with the product sn-glycerol-3-phosphate
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Singer, A.U, Kagan, O, Evdokimova, E, Cuff, M.E, Edwards, A.M, Joachimiak, A, Yakunin, A.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2011-02-25
Release date:2011-04-13
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (1.602 Å)
Cite:The structure of an Oleispira antarctica phosphodiesterase OLEI02445 in complex with the product sn-glycerol-3-phosphate
To be Published
3BRM
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BU of 3brm by Molmil
Crystal structure of the covalent complex between the Bacillus subtilis glutaminase YbgJ and 5-oxo-L-norleucine formed by reaction of the protein with 6-diazo-5-oxo-L-norleucine
Descriptor: 5-OXO-L-NORLEUCINE, Glutaminase 1
Authors:Singer, A.U, Kim, Y, Dementieva, I, Vinokour, E, Joachimiak, A, Savchenko, A, Yakunin, A.
Deposit date:2007-12-21
Release date:2008-05-20
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.29 Å)
Cite:Functional and structural characterization of four glutaminases from Escherichia coli and Bacillus subtilis.
Biochemistry, 47, 2008
3ERP
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BU of 3erp by Molmil
Structure of IDP01002, a putative oxidoreductase from and essential gene of Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, CHLORIDE ION, ...
Authors:Singer, A.U, Minasov, G, Evdokimova, E, Brunzelle, J.S, Kudritska, M, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-10-02
Release date:2008-11-04
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Structural and biochemical studies of novel aldo-keto reductases for the biocatalytic conversion of 3-hydroxybutanal to 1,3-butanediol.
Appl.Environ.Microbiol., 2017
3DRW
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BU of 3drw by Molmil
Crystal Structure of a Phosphofructokinase from Pyrococcus horikoshii OT3 with AMP
Descriptor: ADENOSINE MONOPHOSPHATE, ADP-specific phosphofructokinase, SODIUM ION
Authors:Singer, A.U, Skarina, T, Kochinyan, S, Brown, G, Cuff, M.E, Edwards, A.M, Joachimiak, A, Savchenko, A, Yakunin, A.F, Jia, Z, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-07-11
Release date:2008-12-23
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:ADP-dependent 6-phosphofructokinase from Pyrococcus horikoshii OT3: structure determination and biochemical characterization of PH1645.
J.Biol.Chem., 284, 2009
2NUD
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BU of 2nud by Molmil
The structure of the type III effector AvrB complexed with a high-affinity RIN4 peptide
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Avirulence B protein, RPM1-interacting protein 4, ...
Authors:Singer, A.U, Desveaux, D, Wu, A.J, McNulty, B, Sondek, J, Dangl, J.L.
Deposit date:2006-11-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Type III Effector Activation via Nucleotide Binding, Phosphorylation, and Host Target Interaction.
Plos Pathog., 3, 2007
2NUN
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BU of 2nun by Molmil
The structure of the type III effector AvrB complexed with ADP
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ADENOSINE-5'-DIPHOSPHATE, Avirulence B protein
Authors:Singer, A.U, Desveaux, D, Wu, A.J, McNulty, B, Dangl, J.L, Sondek, J.
Deposit date:2006-11-09
Release date:2007-05-22
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Type III Effector Activation via Nucleotide Binding, Phosphorylation, and Host Target Interaction.
Plos Pathog., 3, 2007
3BRQ
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BU of 3brq by Molmil
Crystal structure of the Escherichia coli transcriptional repressor ascG
Descriptor: HTH-type transcriptional regulator ascG, SODIUM ION, SULFATE ION, ...
Authors:Singer, A.U, Kagan, O, Evdokimova, E, Osipiuk, J, Joachimiak, A, Edwards, A.M, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2007-12-21
Release date:2008-01-22
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the E. coli transcriptional repressor ascG.
To be Published
3DR3
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BU of 3dr3 by Molmil
Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri
Descriptor: D-MALATE, N-acetyl-gamma-glutamyl-phosphate reductase, SODIUM ION
Authors:Singer, A.U, Skarina, T, Onopriyenko, O, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-07-10
Release date:2008-08-05
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of IDP00107, a potential N-acetyl-gamma-glutamylphosphate reductase from Shigella flexneri
To be Published
3DR6
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BU of 3dr6 by Molmil
Structure of yncA, a putative ACETYLTRANSFERASE from Salmonella typhimurium
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, yncA
Authors:Singer, A.U, Skarina, T, Onopriyenko, O, Edwards, A.M, Anderson, W.F, Savchenko, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2008-07-10
Release date:2008-09-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Funded by the national institute of allergy and infectious diseases of nih (contract number hhsn272200700058c).
To be Published
3EXC
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BU of 3exc by Molmil
Structure of the RNA'se SSO8090 from Sulfolobus solfataricus
Descriptor: CHLORIDE ION, SODIUM ION, Uncharacterized protein
Authors:Singer, A.U, Skarina, T, Tan, K, Kagan, O, Onopriyenko, O, Edwards, A.M, Joachimiak, A, Yakunin, A.F, Savchenko, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-10-16
Release date:2008-11-11
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structure of the RNA'se SSO8090 from Sulfolobus solfataricus
To be Published

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PDB entries from 2024-10-30

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