6XHB
 
 | | Crystal Structure of wild-type KRAS (GMPPNP-bound) in complex with RAS-binding domain (RBD) and cysteine-rich domain (CRD) of RAF1/CRAF (crystal form II) | | 分子名称: | CHLORIDE ION, GLYCEROL, GTPase KRas, ... | | 著者 | Tran, T.H, Chan, A.H, Dharmaiah, S, Simanshu, D.K. | | 登録日 | 2020-06-18 | | 公開日 | 2021-01-13 | | 最終更新日 | 2024-10-23 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | KRAS interaction with RAF1 RAS-binding domain and cysteine-rich domain provides insights into RAS-mediated RAF activation.
Nat Commun, 12, 2021
|
|
2HTA
 | | Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in orthorhombic form | | 分子名称: | GLYCEROL, Putative enzyme related to aldose 1-epimerase, SULFATE ION | | 著者 | Chittori, S, Simanshu, D.K, Savithri, H.S, Murthy, M.R.N. | | 登録日 | 2006-07-25 | | 公開日 | 2007-01-23 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.
Acta Crystallogr.,Sect.D, 63, 2007
|
|
2HTB
 | | Crystal Structure of a putative mutarotase (YeaD) from Salmonella typhimurium in monoclinic form | | 分子名称: | Putative enzyme related to aldose 1-epimerase | | 著者 | Chittori, S, Simanshu, D.K, Savithri, H.S, Murthy, M.R.N. | | 登録日 | 2006-07-25 | | 公開日 | 2007-01-23 | | 最終更新日 | 2023-08-30 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structure of the putative mutarotase YeaD from Salmonella typhimurium: structural comparison with galactose mutarotases.
Acta Crystallogr.,Sect.D, 63, 2007
|
|
3O7V
 | | Crystal Structure of human Hiwi1 (V361M) PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end | | 分子名称: | Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3') | | 著者 | Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J. | | 登録日 | 2010-08-01 | | 公開日 | 2011-01-12 | | 最終更新日 | 2017-11-08 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
3O6E
 | | Crystal Structure of human Hiwi1 PAZ domain (residues 277-399) in complex with 14-mer RNA (12-bp + 2-nt overhang) containing 2'-OCH3 at its 3'-end | | 分子名称: | Piwi-like protein 1, RNA (5'-R(*GP*CP*GP*AP*AP*UP*AP*UP*UP*CP*GP*CP*UP*(OMU))-3') | | 著者 | Tian, Y, Simanshu, D.K, Ma, J.-B, Patel, D.J. | | 登録日 | 2010-07-28 | | 公開日 | 2011-01-12 | | 最終更新日 | 2023-12-06 | | 実験手法 | X-RAY DIFFRACTION (2.904 Å) | | 主引用文献 | Inaugural Article: Structural basis for piRNA 2'-O-methylated 3'-end recognition by Piwi PAZ (Piwi/Argonaute/Zwille) domains.
Proc.Natl.Acad.Sci.USA, 108, 2011
|
|
3RIU
 | |
3Q0B
 | |
3Q0C
 | | Crystal structure of SUVH5 SRA-fully methylated CG DNA complex in space group P6122 | | 分子名称: | DNA (5'-D(*AP*CP*TP*AP*(5CM)P*GP*TP*AP*GP*TP*T)-3'), Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5, ... | | 著者 | Eerappa, R, Simanshu, D.K, Patel, D.J. | | 登録日 | 2010-12-15 | | 公開日 | 2011-02-02 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (2.6567 Å) | | 主引用文献 | A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
|
|
3Q0D
 | | Crystal structure of SUVH5 SRA- hemi methylated CG DNA complex | | 分子名称: | CHLORIDE ION, DNA (5'-D(*CP*TP*GP*AP*CP*GP*TP*GP*GP*A)-3'), DNA (5'-D(*TP*CP*CP*AP*(5CM)P*GP*TP*CP*AP*G)-3'), ... | | 著者 | Eerappa, R, Simanshu, D.K, Patel, D.J. | | 登録日 | 2010-12-15 | | 公開日 | 2011-02-23 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.3704 Å) | | 主引用文献 | A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
|
|
3Q0F
 | | Crystal structure of SUVH5 SRA- methylated CHH DNA complex | | 分子名称: | DNA (5'-D(*CP*TP*GP*AP*GP*GP*AP*GP*TP*AP*T)-3'), DNA (5'-D(*TP*AP*CP*TP*(5CM)P*CP*TP*CP*AP*G)-3'), Histone-lysine N-methyltransferase, ... | | 著者 | Eerappa, R, Simanshu, D.K, Patel, D.J. | | 登録日 | 2010-12-15 | | 公開日 | 2011-02-02 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | | 主引用文献 | A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo.
Genes Dev., 25, 2011
|
|
2EGS
 | | Crystal structure of Leu261 to Met mutant of Diphthine synthase | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... | | 著者 | Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-02 | | 公開日 | 2007-09-04 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
|
|
2E7R
 | | Crystal structure of Glu54 to Arg mutant of Diphthine synthase | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... | | 著者 | Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-01-12 | | 公開日 | 2007-07-17 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
|
|
2EGB
 | | Crystal structure of Glu140 to Asn mutant of Diphthine synthase | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... | | 著者 | Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-02-28 | | 公開日 | 2007-08-28 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
|
|
2EGL
 | | Crystal structure of Glu171 to Lys mutant of Diphthine synthase | | 分子名称: | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, S-ADENOSYL-L-HOMOCYSTEINE, ... | | 著者 | Mizutani, H, Matsuura, Y, Krishna Swamy, B.S, Simanshu, D.K, Murthy, M.R.N, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | | 登録日 | 2007-03-01 | | 公開日 | 2007-09-04 | | 最終更新日 | 2023-10-25 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of diphthine synthase from Pyrococcus horikoshii OT3
To be Published
|
|
4RGF
 | | Crystal structure of the in-line aligned env22 twister ribozyme soaked with Mn2+ | | 分子名称: | MAGNESIUM ION, MANGANESE (II) ION, POTASSIUM ION, ... | | 著者 | Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D. | | 登録日 | 2014-09-30 | | 公開日 | 2014-12-03 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (3.2008 Å) | | 主引用文献 | In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
|
|
4RGE
 | | Crystal structure of the in-line aligned env22 twister ribozyme | | 分子名称: | MAGNESIUM ION, env22 twister ribozyme | | 著者 | Ren, A, Rajashankar, K.R, Simanshu, D, Patel, D. | | 登録日 | 2014-09-30 | | 公開日 | 2014-12-03 | | 最終更新日 | 2024-02-28 | | 実験手法 | X-RAY DIFFRACTION (2.89 Å) | | 主引用文献 | In-line alignment and Mg(2+) coordination at the cleavage site of the env22 twister ribozyme.
Nat Commun, 5, 2014
|
|
4NH5
 | |
4NGD
 | | Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 12-mer siRNA having 5'-p and UU-3' ends (1.95 Angstrom resolution) | | 分子名称: | 5'-R(P*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*UP*U)-3', DI(HYDROXYETHYL)ETHER, Endoribonuclease Dicer, ... | | 著者 | Tian, Y, Simanshu, D.K, Patel, D.J. | | 登録日 | 2013-11-01 | | 公開日 | 2014-03-05 | | 最終更新日 | 2023-09-20 | | 実験手法 | X-RAY DIFFRACTION (1.958 Å) | | 主引用文献 | A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.
Mol.Cell, 53, 2014
|
|
