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PDB: 106 results

4BLG
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BU of 4blg by Molmil
Crystal structure of MHV-68 Latency-associated nuclear antigen (LANA) C-terminal DNA binding domain
Descriptor: LATENCY-ASSOCIATED NUCLEAR ANTIGEN, PHOSPHATE ION
Authors:Correia, B, Cerqueira, S.A, Beauchemin, C, Pires De Miranda, M, Li, S, Ponnusamy, R, Rodrigues, L, Schneider, T.R, Carrondo, M.A, Kaye, K.M, Simas, J.P, McVey, C.E.
Deposit date:2013-05-02
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of the Gamma-2 Herpesvirus Lana DNA Binding Domain Identifies Charged Surface Residues which Impact Viral Latency
Plos Pathog., 9, 2013
3LFE
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BU of 3lfe by Molmil
Human p38 MAP Kinase in Complex with RL116
Descriptor: 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-{4-[2-(pyridin-4-ylmethoxy)ethyl]-1,3-thiazol-2-yl}urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2010-01-16
Release date:2011-04-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Development of novel thiazole-urea compounds which stabalize the inactive conformation of p38 alpha
To be Published
3LFB
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BU of 3lfb by Molmil
Human p38 MAP Kinase in Complex with RL98
Descriptor: 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-(1,3-thiazol-2-yl)urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2010-01-16
Release date:2011-04-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Development of novel thiazole-urea compounds which stabalize the inactive conformation of p38 alpha
To be Published
3LFA
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BU of 3lfa by Molmil
Human p38 MAP Kinase in Complex with Dasatinib
Descriptor: Mitogen-activated protein kinase 14, N-(2-CHLORO-6-METHYLPHENYL)-2-({6-[4-(2-HYDROXYETHYL)PIPERAZIN-1-YL]-2-METHYLPYRIMIDIN-4-YL}AMINO)-1,3-THIAZOLE-5-CARBOXAMIDE, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2010-01-16
Release date:2011-04-20
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Development of novel thiazole-urea compounds which stabalize the inactive conformation of p38 alpha
To be Published
4DLI
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BU of 4dli by Molmil
Human p38 MAP kinase in complex with RL87
Descriptor: Mitogen-activated protein kinase 14, N~4~-cyclopropyl-2-phenylquinazoline-4,7-diamine
Authors:Gruetter, C, Getlik, M, Simard, J.R, Rauh, D.
Deposit date:2012-02-06
Release date:2013-01-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Fluorophore labeled kinase detects ligands that bind within the MAPK insert of p38alpha kinase.
Plos One, 7, 2012
3PG3
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BU of 3pg3 by Molmil
Human p38 MAP Kinase in Complex with RL182
Descriptor: 1-[3-tert-butyl-1-(4-methylphenyl)-1H-pyrazol-5-yl]-3-{4-[2-(pyridin-3-ylmethoxy)ethyl]-1,3-thiazol-2-yl}urea, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Gruetter, C, Simard, J.R, Getlik, M, Rauh, D.
Deposit date:2010-10-29
Release date:2011-11-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure-based design and synthesis of cell active N-pyrazole, N-thiazole urea inhibitors of the MAP kinase p38alpha
To be Published
2B1W
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BU of 2b1w by Molmil
Solution structure of the NOD1 Caspase Activating and Recruitment Domain
Descriptor: Caspase recruitment domain protein 4
Authors:Manon, F, Favier, A, Simorre, J.P, Cusack, S.
Deposit date:2005-09-16
Release date:2006-09-26
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution structure of NOD1 CARD and mutational analysis of its interaction with the CARD of downstream kinase RICK.
J.Mol.Biol., 365, 2007
2GMO
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BU of 2gmo by Molmil
NMR-structure of an independently folded C-terminal domain of influenza polymerase subunit PB2
Descriptor: Polymerase basic protein 2
Authors:Boudet, J, Tarendeau, F, Guilligay, D, Mas, P, Bougault, C.M, Cusack, S, Simorre, J.-P, Hart, D.J.
Deposit date:2006-04-07
Release date:2007-02-27
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structure and nuclear import function of the C-terminal domain of influenza virus polymerase PB2 subunit.
Nat.Struct.Mol.Biol., 14, 2007
1K30
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BU of 1k30 by Molmil
Crystal Structure Analysis of Squash (Cucurbita moschata) glycerol-3-phosphate (1)-acyltransferase
Descriptor: glycerol-3-phosphate acyltransferase
Authors:Turnbull, A.P, Rafferty, J.B, Sedelnikova, S.E, Slabas, A.R, Schierer, T.P, Kroon, J.T, Simon, J.W, Fawcett, T, Nishida, I, Murata, N, Rice, D.W.
Deposit date:2001-10-01
Release date:2001-10-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Analysis of the structure, substrate specificity, and mechanism of squash glycerol-3-phosphate (1)-acyltransferase.
Structure, 9, 2001
2P7C
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BU of 2p7c by Molmil
Solution structure of the bacillus licheniformis BlaI monomeric form in complex with the blaP half-operator.
Descriptor: Penicillinase repressor, Strand 1 of Twelve base-pair DNA, Strand 2 of Twelve base-pair DNA
Authors:Boudet, J, Duval, V, Van Melckebeke, H, Blackledge, M, Amoroso, A, Joris, B, Simorre, J.-P.
Deposit date:2007-03-20
Release date:2007-06-12
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational and thermodynamic changes of the repressor/DNA operator complex upon monomerization shed new light on regulation mechanisms of bacterial resistance against beta-lactam antibiotics.
Nucleic Acids Res., 35, 2007
1P6R
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BU of 1p6r by Molmil
Solution structure of the DNA binding domain of the repressor BlaI.
Descriptor: Penicillinase repressor
Authors:Melckebeke, H.V, Vreuls, C, Gans, P, Llabres, G, Filee, P, Joris, B, Simorre, J.P.
Deposit date:2003-04-30
Release date:2003-12-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structural study of BlaI: implications for the repression of genes involved in beta-lactam antibiotic resistance.
J.Mol.Biol., 333, 2003
1RLQ
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BU of 1rlq by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
Descriptor: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND RLP2 (RALPPLPRY)
Authors:Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
Deposit date:1994-10-10
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
1I5V
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BU of 1i5v by Molmil
SOLUTION STRUCTURE OF 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL INTERCALATED IN THE DNA DUPLEX D(CGATCG)2
Descriptor: 2-(PYRIDO[1,2-E]PURIN-4-YL)AMINO-ETHANOL, 5'-D(*CP*GP*AP*TP*CP*G)-3'
Authors:Favier, A, Blackledge, M, Simorre, J.P, Marion, D, Debousy, J.C.
Deposit date:2001-03-01
Release date:2001-03-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of 2-(pyrido[1,2-e]purin-4-yl)amino-ethanol intercalated in the DNA duplex d(CGATCG)2.
Biochemistry, 40, 2001
1FS8
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BU of 1fs8 by Molmil
CYTOCHROME C NITRITE REDUCTASE FROM WOLINELLA SUCCINOGENES-SULFATE COMPLEX
Descriptor: ACETATE ION, CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE, ...
Authors:Einsle, O, Stach, P, Messerschmidt, A, Simon, J, Kroeger, A, Huber, R, Kroneck, P.M.H.
Deposit date:2000-09-08
Release date:2001-01-17
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cytochrome c nitrite reductase from Wolinella succinogenes. Structure at 1.6 A resolution, inhibitor binding, and heme-packing motifs.
J.Biol.Chem., 275, 2000
1FS7
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BU of 1fs7 by Molmil
CYTOCHROME C NITRITE REDUCTASE FROM WOLINELLA SUCCINOGENES
Descriptor: ACETATE ION, CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE, ...
Authors:Einsle, O, Stach, P, Messerschmidt, A, Simon, J, Kroeger, A, Huber, R, Kroneck, P.M.H.
Deposit date:2000-09-08
Release date:2001-01-17
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Cytochrome c nitrite reductase from Wolinella succinogenes. Structure at 1.6 A resolution, inhibitor binding, and heme-packing motifs.
J.Biol.Chem., 275, 2000
1FS9
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BU of 1fs9 by Molmil
CYTOCHROME C NITRITE REDUCTASE FROM WOLINELLA SUCCINOGENES-AZIDE COMPLEX
Descriptor: AZIDE ION, CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE, ...
Authors:Einsle, O, Stach, P, Messerschmidt, A, Simon, J, Kroeger, A, Huber, R, Kroneck, P.M.H.
Deposit date:2000-09-08
Release date:2001-01-17
Last modified:2021-03-03
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cytochrome c nitrite reductase from Wolinella succinogenes. Structure at 1.6 A resolution, inhibitor binding, and heme-packing motifs.
J.Biol.Chem., 275, 2000
2UWJ
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BU of 2uwj by Molmil
Structure of the heterotrimeric complex which regulates type III secretion needle formation
Descriptor: NICKEL (II) ION, TYPE III EXPORT PROTEIN PSCE, TYPE III EXPORT PROTEIN PSCF, ...
Authors:Quinaud, M, Ple, S, Job, V, Contreras-Martel, C, Simorre, J.P, Attree, I, Dessen, A.
Deposit date:2007-03-22
Release date:2007-05-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of the heterotrimeric complex that regulates type III secretion needle formation.
Proc. Natl. Acad. Sci. U.S.A., 104, 2007
1GH1
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BU of 1gh1 by Molmil
NMR STRUCTURES OF WHEAT NONSPECIFIC LIPID TRANSFER PROTEIN
Descriptor: NONSPECIFIC LIPID TRANSFER PROTEIN
Authors:Gincel, E, Simorre, J.P, Caille, A, Marion, D, Ptak, M, Vovelle, F.
Deposit date:2000-10-29
Release date:2000-11-22
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Three-dimensional structure in solution of a wheat lipid-transfer protein from multidimensional 1H-NMR data. A new folding for lipid carriers.
Eur.J.Biochem., 226, 1994
1RLP
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BU of 1rlp by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
Descriptor: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND RLP2 (RALPPLPRY)
Authors:Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
Deposit date:1994-10-10
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
1PRM
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BU of 1prm by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
Descriptor: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND PLR1 (AFAPPLPRR)
Authors:Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
Deposit date:1994-10-10
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
1PRL
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BU of 1prl by Molmil
TWO BINDING ORIENTATIONS FOR PEPTIDES TO SRC SH3 DOMAIN: DEVELOPMENT OF A GENERAL MODEL FOR SH3-LIGAND INTERACTIONS
Descriptor: C-SRC TYROSINE KINASE SH3 DOMAIN, PROLINE-RICH LIGAND PLR1 (AFAPPLPRR)
Authors:Feng, S, Chen, J.K, Yu, H, Simon, J.A, Schreiber, S.L.
Deposit date:1994-10-10
Release date:1995-02-07
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Two binding orientations for peptides to the Src SH3 domain: development of a general model for SH3-ligand interactions.
Science, 266, 1994
1S62
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BU of 1s62 by Molmil
Solution structure of the Escherichia coli TolA C-terminal domain
Descriptor: TolA protein
Authors:Deprez, C, Blanchard, L, Simorre, J.-P, Gavioli, M, Guerlesquin, F, Lazdunski, C, Lloubes, R, Marion, D.
Deposit date:2004-01-22
Release date:2005-02-15
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:Solution structure of the E.coli TolA C-terminal domain reveals conformational changes upon binding to the phage g3p N-terminal domain.
J.Mol.Biol., 346, 2005
2M32
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BU of 2m32 by Molmil
Alpha-1 integrin I-domain in complex with GLOGEN triple helical peptide
Descriptor: GLOGEN peptide, Integrin alpha-1, MAGNESIUM ION
Authors:Chin, Y, Headey, S, Mohanty, B, McEwan, P, Swarbrick, J, Mulhern, T, Emsley, J, Simpson, J, Scanlon, M.
Deposit date:2013-01-07
Release date:2013-11-06
Last modified:2014-02-12
Method:SOLUTION NMR
Cite:The Structure of Integrin alpha 1I Domain in Complex with a Collagen-mimetic Peptide.
J.Biol.Chem., 288, 2013
2MHK
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BU of 2mhk by Molmil
E. coli LpoA N-terminal domain
Descriptor: Penicillin-binding protein activator LpoA
Authors:Jean, N.L, Bougault, C, Lodge, A, Derouaux, A, Callens, G, Egan, A, Lewis, R.J, Vollmer, W, Simorre, J.
Deposit date:2013-11-26
Release date:2014-06-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Elongated Structure of the Outer-Membrane Activator of Peptidoglycan Synthesis LpoA: Implications for PBP1A Stimulation.
Structure, 22, 2014
2JX0
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BU of 2jx0 by Molmil
The paxillin-binding domain (PBD) of G Protein Coupled Receptor (GPCR)-kinase (GRK) interacting protein 1 (GIT1)
Descriptor: ARF GTPase-activating protein GIT1
Authors:Zhang, Z, Guibao, C.D, Simmerman, J.A, Zheng, J.
Deposit date:2007-11-01
Release date:2008-04-29
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:GIT1 paxillin-binding domain is a four-helix bundle, and it binds to both paxillin LD2 and LD4 motifs.
J.Biol.Chem., 283, 2008

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