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PDB: 576 件

5WZK
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Structure of APUM23-deletion-of-insert-region-GGAAUUGACGG
分子名称: Pumilio homolog 23, RNA (5'-R(*GP*GP*AP*AP*UP*UP*GP*AP*CP*GP*G)-3')
著者Bao, H, Wang, N, Wang, C, Jiang, Y, Wu, J, Shi, Y.
登録日2017-01-18
公開日2017-09-27
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis for the specific recognition of 18S rRNA by APUM23.
Nucleic Acids Res., 45, 2017
5WZ3
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Crystal structure of Zika virus NS5 RNA-dependent RNA polymerase(RdRP)
分子名称: NS5 RdRp, ZINC ION
著者Duan, W, Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2017-01-16
公開日2017-03-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.804 Å)
主引用文献The crystal structure of Zika virus NS5 reveals conserved drug targets.
EMBO J., 36, 2017
5WQ1
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BU of 5wq1 by Molmil
Solution Structure of the first stem-loop of Escherichia coli DsrA RNA
分子名称: DsrA-SL1
著者Wu, P, Wu, J, Shi, Y.
登録日2016-11-22
公開日2017-07-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The important conformational plasticity of DsrA sRNA for adapting multiple target regulation
Nucleic Acids Res., 45, 2017
5XEB
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BU of 5xeb by Molmil
Structure of the envelope glycoprotein of Dhori virus
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope glycoprotein
著者Peng, R, Shi, Y, Qi, J, Gao, G.F.
登録日2017-04-03
公開日2017-10-04
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.497 Å)
主引用文献Structures of human-infectingThogotovirusfusogens support a common ancestor with insect baculovirus
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
8Y6O
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BU of 8y6o by Molmil
Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U11 and tri-snRNP part
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Centrosomal AT-AC splicing factor, GUANOSINE-5'-TRIPHOSPHATE, ...
著者Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
登録日2024-02-02
公開日2024-03-20
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.38 Å)
主引用文献Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
8Y7E
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Cryo-EM Structure of the human minor pre-B complex (pre-precatalytic spliceosome) U12 snRNP part
分子名称: PHD finger-like domain-containing protein 5A, Small nuclear ribonucleoprotein E, Small nuclear ribonucleoprotein F, ...
著者Bai, R, Yuan, M, Zhang, P, Luo, T, Shi, Y, Wan, R.
登録日2024-02-04
公開日2024-03-13
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.66 Å)
主引用文献Structural basis of U12-type intron engagement by the fully assembled human minor spliceosome.
Science, 383, 2024
3KV5
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Structure of KIAA1718, human Jumonji demethylase, in complex with N-oxalylglycine
分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KV9
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Structure of KIAA1718 Jumonji domain
分子名称: FE (II) ION, JmjC domain-containing histone demethylation protein 1D, OXYGEN MOLECULE
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.29 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KVB
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Structure of KIAA1718 Jumonji domain in complex with N-oxalylglycine
分子名称: JmjC domain-containing histone demethylation protein 1D, N-OXALYLGLYCINE, NICKEL (II) ION, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.69 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KV4
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Structure of PHF8 in complex with histone H3
分子名称: 1,2-ETHANEDIOL, FE (II) ION, Histone H3-like, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3KVA
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Structure of KIAA1718 Jumonji domain in complex with alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.79 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
3L1L
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BU of 3l1l by Molmil
Structure of Arg-bound Escherichia coli AdiC
分子名称: ARGININE, Arginine/agmatine antiporter, nonyl beta-D-glucopyranoside
著者Gao, X, Zhou, L, Shi, Y.
登録日2009-12-13
公開日2010-02-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Mechanism of substrate recognition and transport by an amino acid antiporter
Nature, 463, 2010
3KV6
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BU of 3kv6 by Molmil
Structure of KIAA1718, human Jumonji demethylase, in complex with alpha-ketoglutarate
分子名称: 2-OXOGLUTARIC ACID, FE (II) ION, JmjC domain-containing histone demethylation protein 1D, ...
著者Horton, J.R, Upadhyay, A.K, Qi, H.H, Zhang, X, Shi, Y, Cheng, X.
登録日2009-11-29
公開日2009-12-22
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.89 Å)
主引用文献Enzymatic and structural insights for substrate specificity of a family of jumonji histone lysine demethylases.
Nat.Struct.Mol.Biol., 17, 2010
1G73
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BU of 1g73 by Molmil
CRYSTAL STRUCTURE OF SMAC BOUND TO XIAP-BIR3 DOMAIN
分子名称: INHIBITORS OF APOPTOSIS-LIKE PROTEIN ILP, SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES, ZINC ION
著者Wu, G, Chai, J, Suber, T.L, Wu, J.-W, Shi, Y.
登録日2000-11-08
公開日2001-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of IAP recognition by Smac/DIABLO.
Nature, 408, 2000
6KUT
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BU of 6kut by Molmil
Structure of influenza D virus polymerase bound to vRNA promoter in Mode B conformation (Class B2)
分子名称: 3'-vRNA, 5'-vRNA, Polymerase 3, ...
著者Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y.
登録日2019-09-02
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural insight into RNA synthesis by influenza D polymerase.
Nat Microbiol, 4, 2019
6KV5
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BU of 6kv5 by Molmil
Structure of influenza D virus apo polymerase
分子名称: Polymerase 3, Polymerase PB2, RNA-directed RNA polymerase catalytic subunit
著者Peng, Q, Peng, R, Qi, J, Gao, G.F, Shi, Y.
登録日2019-09-03
公開日2019-10-02
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural insight into RNA synthesis by influenza D polymerase.
Nat Microbiol, 4, 2019
1KKX
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BU of 1kkx by Molmil
Solution structure of the DNA-binding domain of ADR6
分子名称: Transcription regulatory protein ADR6
著者Tu, X, Wu, J, Xu, Y, Shi, Y.
登録日2001-12-10
公開日2002-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain.
J.Biomol.Nmr, 21, 2001
1KN5
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BU of 1kn5 by Molmil
SOLUTION STRUCTURE OF ARID DOMAIN OF ADR6 FROM SACCHAROMYCES CEREVISIAE
分子名称: Transcription regulatory protein ADR6
著者Tu, X, Wu, J, Xu, Y, Shi, Y.
登録日2001-12-18
公開日2002-07-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain.
J.Biomol.Nmr, 21, 2001
7BW4
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BU of 7bw4 by Molmil
Structure of the RNA-dependent RNA polymerase from SARS-CoV-2
分子名称: Non-structural protein 7, Non-structural protein 8, RNA-directed RNA polymerase, ...
著者Peng, Q, Peng, R, Shi, Y.
登録日2020-04-13
公開日2020-05-27
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural and Biochemical Characterization of the nsp12-nsp7-nsp8 Core Polymerase Complex from SARS-CoV-2.
Cell Rep, 31, 2020
5JHM
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BU of 5jhm by Molmil
Crystal structure of Zika virus Envelope protein
分子名称: Envelope protein
著者Dai, L, Shi, Y, Qi, J, Gao, G.F.
登録日2016-04-21
公開日2016-05-11
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structures of the Zika Virus Envelope Protein and Its Complex with a Flavivirus Broadly Protective Antibody.
Cell Host Microbe, 19, 2016
5X5W
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BU of 5x5w by Molmil
Crystal structure of pseudorabies virus glycoprotein D
分子名称: GD, Nectin-1
著者Li, A, Lu, G, Qi, J, Wu, L, Tian, K, Luo, T, Shi, Y, Yan, J, Gao, G.F.
登録日2017-02-17
公開日2017-04-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of pseudorabies virus glycoprotein D
To Be Published
5XJC
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Cryo-EM structure of the human spliceosome just prior to exon ligation at 3.6 angstrom
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Zhang, X, Yan, C, Hang, J, Finci, I.L, Lei, J, Shi, Y.
登録日2017-04-30
公開日2017-07-05
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献An Atomic Structure of the Human Spliceosome
Cell, 169, 2017
1Q2K
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BU of 1q2k by Molmil
Solution structure of BmBKTx1 a new potassium channel blocker from the Chinese Scorpion Buthus martensi Karsch
分子名称: Neurotoxin BmK37
著者Cai, Z, Xu, C, Xu, Y, Lu, W, Chi, C.W, Shi, Y, Wu, J.
登録日2003-07-25
公開日2003-09-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献Solution Structure of BmBKTx1, a New BK(Ca)(1) Channel Blocker from the Chinese Scorpion Buthus martensi Karsch(,).
Biochemistry, 43, 2004
1RJI
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BU of 1rji by Molmil
Solution Structure of BmKX, a novel potassium channel blocker from the Chinese Scorpion Buthus martensi Karsch
分子名称: potassium channel toxin KX
著者Cai, Z, Wu, J, Xu, Y, Wang, C.-G, Chi, C.-W, Shi, Y.
登録日2003-11-19
公開日2003-12-09
最終更新日2022-03-02
実験手法SOLUTION NMR
主引用文献A novel short-chain peptide BmKX from the Chinese scorpion Buthus martensi karsch, sequencing, gene cloning and structure determination
Toxicon, 45, 2005
1OZJ
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BU of 1ozj by Molmil
Crystal structure of Smad3-MH1 bound to DNA at 2.4 A resolution
分子名称: SMAD 3, Smad binding element, ZINC ION
著者Chai, J, Wu, J.-W, Yan, N, Massague, J, Pavletich, N.P, Shi, Y.
登録日2003-04-09
公開日2004-03-23
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Features of a Smad3 MH1-DNA complex. Roles of water and zinc in DNA binding.
J.Biol.Chem., 278, 2003

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