Loading
PDBj
English日本語简体中文繁體中文한국어
✖
ﾒﾆｭｰPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1963 件
2PKU
DownloadVisualize
BU of 2pku by Molmil
Solution structure of PICK1 PDZ in complex with the carboxyl tail peptide of GluR2
分子名称: PRKCA-binding protein, peptide (GLU)(SER)(VAL)(LYS)(ILE)
著者Pan, L, Wu, H, Shen, C, Shi, Y, Xia, J, Zhang, M.
登録日2007-04-18
公開日2007-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Clustering and synaptic targeting of PICK1 requires direct interaction between the PDZ domain and lipid membranes
Embo J., 26, 2007
2PPH
DownloadVisualize
BU of 2pph by Molmil
solution structure of human MEKK3 PB1 domain
分子名称: Mitogen-activated protein kinase kinase kinase 3
著者Hu, Q, Zhang, J, Wu, J, Shi, Y.
登録日2007-04-30
公開日2007-05-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Insight into the Binding Properties of MEKK3 PB1 to MEK5 PB1 from Its Solution Structure.
Biochemistry, 46, 2007
2Q0O
DownloadVisualize
BU of 2q0o by Molmil
Crystal structure of an anti-activation complex in bacterial quorum sensing
分子名称: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, Probable transcriptional activator protein traR, Probable transcriptional repressor traM
著者Chen, G, Jeffrey, P.D, Fuqua, C, Shi, Y, Chen, L.
登録日2007-05-22
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for antiactivation in bacterial quorum sensing.
Proc.Natl.Acad.Sci.Usa, 104, 2007
4I5J
DownloadVisualize
BU of 4i5j by Molmil
PP2A PR70 Holoenzyme
分子名称: CALCIUM ION, Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha
著者Xing, Y, Jeffery, P.D, Shi, Y.
登録日2012-11-28
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.091 Å)
主引用文献Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation.
Cell Res., 23, 2013
4I5K
DownloadVisualize
BU of 4i5k by Molmil
PP2A PR70 Holoenzyme model3_diCa_rcsb.pdb bppnat5_extend.mtz
分子名称: CALCIUM ION, Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha
著者Xing, Y, Jeffrey, P.D, Shi, Y.
登録日2012-11-28
公開日2013-05-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Ca(2+)-dependent PP2A heterotrimer and insights into Cdc6 dephosphorylation.
Cell Res., 23, 2013
5YYZ
DownloadVisualize
BU of 5yyz by Molmil
Crystal structure of the MEK1 FHA domain in complex with the HOP1 pThr318 peptide.
分子名称: Meiosis-specific protein HOP1, Meiosis-specific serine/threonine-protein kinase MEK1
著者Xie, C, Li, F, Jiang, Y, Wu, J, Shi, Y.
登録日2017-12-11
公開日2018-10-17
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.798 Å)
主引用文献Structural insights into the recognition of phosphorylated Hop1 by Mek1
Acta Crystallogr D Struct Biol, 74, 2018
5Z4M
DownloadVisualize
BU of 5z4m by Molmil
Structure of TailorD343A with bound UTP and Mg
分子名称: MAGNESIUM ION, Terminal uridylyltransferase Tailor, URIDINE 5'-TRIPHOSPHATE
著者Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
登録日2018-01-11
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5Z4D
DownloadVisualize
BU of 5z4d by Molmil
Structure of Tailor in complex with AGUU RNA
分子名称: RNA (5'-R(*AP*GP*UP*U)-3'), Terminal uridylyltransferase Tailor
著者Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
登録日2018-01-11
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.803 Å)
主引用文献Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5Z4C
DownloadVisualize
BU of 5z4c by Molmil
Crystal structure of Tailor
分子名称: Terminal uridylyltransferase Tailor
著者Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
登録日2018-01-10
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5Z4J
DownloadVisualize
BU of 5z4j by Molmil
Structure of Tailor in complex with U4 RNA
分子名称: RNA (5'-R(*UP*UP*UP*U)-3'), Terminal uridylyltransferase Tailor
著者Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
登録日2018-01-11
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5Z4A
DownloadVisualize
BU of 5z4a by Molmil
Structure of Tailor in complex with AGU RNA
分子名称: RNA (5'-R(*AP*GP*U)-3'), Terminal uridylyltransferase Tailor
著者Cheng, L, Li, F, Jiang, Y, Yu, H, Xie, C, Shi, Y, Gong, Q.
登録日2018-01-10
公開日2018-10-31
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.637 Å)
主引用文献Structural insights into a unique preference for 3' terminal guanine of mirtron in Drosophila TUTase tailor.
Nucleic Acids Res., 47, 2019
5YYX
DownloadVisualize
BU of 5yyx by Molmil
Crystal Structure of the MEK1 FHA domain
分子名称: Meiosis-specific serine/threonine-protein kinase MEK1
著者Xie, C, Li, F, Jiang, Y, Wu, J, Shi, Y.
登録日2017-12-11
公開日2018-10-10
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.684 Å)
主引用文献Structural insights into the recognition of phosphorylated Hop1 by Mek1
Acta Crystallogr D Struct Biol, 74, 2018
5Y1U
DownloadVisualize
BU of 5y1u by Molmil
Crystal structure of RBBP4 bound to AEBP2 RRK motif
分子名称: Histone-binding protein RBBP4, SULFATE ION, Zinc finger protein AEBP2
著者Sun, A, Li, F, Wu, J, Shi, Y.
登録日2017-07-21
公開日2018-04-18
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.141 Å)
主引用文献Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4
Protein Cell, 2017
5YLZ
DownloadVisualize
BU of 5ylz by Molmil
Cryo-EM Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae at 3.6 angstrom
分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, MAGNESIUM ION, ...
著者Wan, R, Yan, C, Bai, R, Lei, J, Shi, Y.
登録日2017-10-20
公開日2018-07-18
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Structure of the Post-catalytic Spliceosome from Saccharomyces cerevisiae
Cell, 171, 2017
8J3S
DownloadVisualize
BU of 8j3s by Molmil
Complex structure of human cytomegalovirus protease and a macrocyclic peptide ligand
分子名称: Assemblin, PHE-ILE-THR-GLY-HIS-TYR-TRP-VAL-ARG-PHE-LEU-PRO-CYS-GLY
著者Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
登録日2023-04-18
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (3.09 Å)
主引用文献Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
8J3T
DownloadVisualize
BU of 8j3t by Molmil
Complex structure of human cytomegalovirus protease and a non-covalent small-molecule ligand
分子名称: (4R)-1-[1-[(S)-[1-cyclopentyl-3-(2-methylphenyl)pyrazol-4-yl]-(4-methylphenyl)methyl]-2-oxidanylidene-pyridin-3-yl]-3-methyl-2-oxidanylidene-N-(3-oxidanylidene-2-azabicyclo[2.2.2]octan-4-yl)imidazolidine-4-carboxamide, Assemblin
著者Yoshida, S, Sako, Y, Nikaido, E, Ueda, T, Kozono, I, Ichihashi, Y, Nakahashi, A, Onishi, M, Yamatsu, Y, Kato, T, Nishikawa, J, Tachibana, Y.
登録日2023-04-18
公開日2023-11-08
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Peptide-to-Small Molecule: Discovery of Non-Covalent, Active-Site Inhibitors of beta-Herpesvirus Proteases.
Acs Med.Chem.Lett., 14, 2023
5Y88
DownloadVisualize
BU of 5y88 by Molmil
Cryo-EM structure of the intron-lariat spliceosome ready for disassembly from S.cerevisiae at 3.5 angstrom
分子名称: GUANOSINE-5'-TRIPHOSPHATE, INOSITOL HEXAKISPHOSPHATE, Intron lariat, ...
著者Wan, R, Yan, C, Bai, R, Lei, J, Shi, Y.
登録日2017-08-20
公開日2018-08-01
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Structure of an Intron Lariat Spliceosome from Saccharomyces cerevisiae
Cell(Cambridge,Mass.), 171, 2017
5Y0U
DownloadVisualize
BU of 5y0u by Molmil
The solution structure of AEBP2 C2H2 zinc fingers
分子名称: ZINC ION, Zinc finger protein AEBP2
著者Sun, A, Shi, Y, Wu, J.
登録日2017-07-18
公開日2018-08-01
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structural and biochemical insights into human zinc finger protein AEBP2 reveals interactions with RBBP4.
Protein Cell, 9, 2018
5Z58
DownloadVisualize
BU of 5z58 by Molmil
Cryo-EM structure of a human activated spliceosome (early Bact) at 4.9 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5ZWO
DownloadVisualize
BU of 5zwo by Molmil
Cryo-EM structure of the yeast B complex at average resolution of 3.9 angstrom
分子名称: 13 kDa ribonucleoprotein-associated protein, 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component, 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component, ...
著者Bai, R, Wan, R, Yan, C, Shi, Y.
登録日2018-05-16
公開日2018-08-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structures of the fully assembledSaccharomyces cerevisiaespliceosome before activation
Science, 360, 2018
5YXA
DownloadVisualize
BU of 5yxa by Molmil
Crystal structure of the C-terminal fragment of NS1 protein from yellow fever virus
分子名称: Non-structural protein 1
著者Wang, H, Song, H, Qi, J, Shi, Y, Gao, G.F.
登録日2017-12-04
公開日2018-01-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the C-terminal fragment of NS1 protein from yellow fever virus.
Sci China Life Sci, 60, 2017
5Z56
DownloadVisualize
BU of 5z56 by Molmil
cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5Z57
DownloadVisualize
BU of 5z57 by Molmil
Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ALANINE, BUD13 homolog, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5YZG
DownloadVisualize
BU of 5yzg by Molmil
The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Zhan, X, Yan, C, Zhang, X, Lei, J, Shi, Y.
登録日2017-12-14
公開日2018-08-08
最終更新日2020-10-14
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of a human catalytic step I spliceosome
Science, 359, 2018
5ZWN
DownloadVisualize
BU of 5zwn by Molmil
Cryo-EM structure of the yeast pre-B complex at an average resolution of 3.3 angstrom (Part II: U1 snRNP region)
分子名称: 56 kDa U1 small nuclear ribonucleoprotein component, Pre-mRNA-processing factor 39, Pre-mRNA-splicing ATP-dependent RNA helicase PRP28, ...
著者Bai, R, Wan, R, Yan, C, Lei, J, Shi, Y.
登録日2018-05-16
公開日2018-08-29
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structures of the fully assembledSaccharomyces cerevisiaespliceosome before activation
Science, 360, 2018

221716

件を2024-06-26に公開中

PDB statisticsPDBj update infoContact PDBjnumon