Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1971 件

2A5Y
DownloadVisualize
BU of 2a5y by Molmil
Structure of a CED-4/CED-9 complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Apoptosis regulator ced-9, MAGNESIUM ION, ...
著者Yan, N, Liu, Q, Hao, Q, Gu, L, Shi, Y.
登録日2005-07-01
公開日2005-10-11
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the CED-4-CED-9 complex provides insights into programmed cell death in Caenorhabditis elegans.
Nature, 437, 2005
1YOP
DownloadVisualize
BU of 1yop by Molmil
The solution structure of Kti11p
分子名称: Kti11p, ZINC ION
著者Sun, J, Zhang, J, Wu, F, Xu, C, Li, S, Zhao, W, Wu, Z, Wu, J, Zhou, C.-Z, Shi, Y.
登録日2005-01-28
公開日2005-04-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of Kti11p from Saccharomyces cerevisiae reveals a novel zinc-binding module.
Biochemistry, 44, 2005
3PXG
DownloadVisualize
BU of 3pxg by Molmil
Structure of MecA121 and ClpC1-485 complex
分子名称: Adapter protein mecA 1, Negative regulator of genetic competence ClpC/MecB
著者Wang, F, Mei, Z.Q, Wang, J.W, Shi, Y.G.
登録日2010-12-09
公開日2011-03-16
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3.654 Å)
主引用文献Structure and mechanism of the hexameric MecA-ClpC molecular machine.
Nature, 471, 2011
1P1E
DownloadVisualize
BU of 1p1e by Molmil
Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
分子名称: Glutamate receptor interacting protein
著者Feng, W, Shi, Y, Li, M, Zhang, M.
登録日2003-04-12
公開日2003-11-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Tandem PDZ repeats in glutamate receptor-interacting proteins have a novel mode of PDZ domain-mediated target binding
Nat.Struct.Biol., 10, 2003
7DCQ
DownloadVisualize
BU of 7dcq by Molmil
cryo-EM structure of the DEAH-box helicase Prp2
分子名称: PRP2 isoform 1
著者Bai, R, Wan, R, Yan, C, Jia, Q, Zhang, P, Lei, J, Shi, Y.
登録日2020-10-26
公開日2021-01-06
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Mechanism of spliceosome remodeling by the ATPase/helicase Prp2 and its coactivator Spp2.
Science, 371, 2021
7BCQ
DownloadVisualize
BU of 7bcq by Molmil
ASCT2 in the presence of the inhibitor Lc-BPE (position "up") in the outward-open conformation.
分子名称: 4-(4-phenylphenyl)carbonyloxypyrrolidine-2-carboxylic acid, Neutral amino acid transporter B(0)
著者Garibsingh, R.A, Ndaru, E, Garaeva, A.A, Shi, Y, Zielewicz, L, Bonomi, M, Slotboom, D.J, Paulino, C, Grewer, C, Schlessinger, A.
登録日2020-12-21
公開日2021-09-22
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.43 Å)
主引用文献Rational design of ASCT2 inhibitors using an integrated experimental-computational approach.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BCT
DownloadVisualize
BU of 7bct by Molmil
ASCT2 in the presence of the inhibitor ERA-21 in the outward-open conformation.
分子名称: Neutral amino acid transporter B(0)
著者Garibsingh, R.A, Ndaru, E, Garaeva, A.A, Shi, Y, Zielewicz, L, Bonomi, M, Slotboom, D.J, Paulino, C, Grewer, C, Schlessinger, A.
登録日2020-12-21
公開日2021-09-22
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.37 Å)
主引用文献Rational design of ASCT2 inhibitors using an integrated experimental-computational approach.
Proc.Natl.Acad.Sci.USA, 118, 2021
7D8X
DownloadVisualize
BU of 7d8x by Molmil
CryoEM structure of human gamma-secretase in complex with E2012 and L685458
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1-[(1S)-1-(4-fluorophenyl)ethyl]-3-[[3-methoxy-4-(4-methylimidazol-1-yl)phenyl]methylidene]piperidin-2-one, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Yang, G, Zhou, R, Guo, X, Lei, J, Yan, C, Shi, Y.
登録日2020-10-11
公開日2021-01-27
最終更新日2021-02-03
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structural basis of gamma-secretase inhibition and modulation by small molecule drugs.
Cell, 184, 2021
1Z8U
DownloadVisualize
BU of 1z8u by Molmil
Crystal structure of oxidized alpha hemoglobin bound to AHSP
分子名称: Alpha-hemoglobin stabilizing protein, Hemoglobin alpha chain, PROTOPORPHYRIN IX CONTAINING FE
著者Feng, L, Zhou, S, Gu, L, Gell, D.A, Mackay, J.P, Weiss, M.J, Gow, A.J, Shi, Y.
登録日2005-03-31
公開日2005-06-14
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of oxidized alpha-haemoglobin bound to AHSP reveals a protective mechanism for haem.
Nature, 435, 2005
1SE0
DownloadVisualize
BU of 1se0 by Molmil
Crystal structure of DIAP1 BIR1 bound to a Grim peptide
分子名称: Apoptosis 1 inhibitor, Cell death protein Grim, ZINC ION
著者Yan, N, Wu, J.W, Shi, Y.
登録日2004-02-15
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Molecular mechanisms of DrICE inhibition by DIAP1 and removal of inhibition by Reaper, Hid and Grim.
Nat.Struct.Mol.Biol., 11, 2004
1SDZ
DownloadVisualize
BU of 1sdz by Molmil
Crystal structure of DIAP1 BIR1 bound to a Reaper peptide
分子名称: Apoptosis 1 inhibitor, Reaper, ZINC ION
著者Yan, N, Wu, J.W, Shi, Y.
登録日2004-02-15
公開日2004-04-27
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Molecular mechanisms of DrICE inhibition by DIAP1 and removal of inhibition by Reaper, Hid and Grim.
Nat.Struct.Mol.Biol., 11, 2004
2AYN
DownloadVisualize
BU of 2ayn by Molmil
Structure of USP14, a proteasome-associated deubiquitinating enzyme
分子名称: Ubiquitin carboxyl-terminal hydrolase 14
著者Hu, M, Li, P, Jeffrey, P.D, Shi, Y.
登録日2005-09-07
公開日2005-10-18
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structure and mechanisms of the proteasome-associated deubiquitinating enzyme USP14.
Embo J., 24, 2005
1F0K
DownloadVisualize
BU of 1f0k by Molmil
THE 1.9 ANGSTROM CRYSTAL STRUCTURE OF E. COLI MURG
分子名称: SULFATE ION, UDP-N-ACETYLGLUCOSAMINE-N-ACETYLMURAMYL-(PENTAPEPTIDE) PYROPHOSPHORYL-UNDECAPRENOL N-ACETYLGLUCOSAMINE TRANSFERASE
著者Ha, S, Walker, D, Shi, Y, Walker, S.
登録日2000-05-16
公開日2000-07-27
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The 1.9 A crystal structure of Escherichia coli MurG, a membrane-associated glycosyltransferase involved in peptidoglycan biosynthesis.
Protein Sci., 9, 2000
2P1L
DownloadVisualize
BU of 2p1l by Molmil
Structure of the Bcl-XL:Beclin 1 complex
分子名称: Apoptosis regulator Bcl-X, Beclin 1
著者Jeffrey, P.D, Shi, Y, Oberstein, A.L.
登録日2007-03-05
公開日2007-03-13
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of the Bcl-XL-Beclin 1 peptide complex: Beclin 1 is a novel BH3-only protein
J.Biol.Chem., 282, 2007
1I51
DownloadVisualize
BU of 1i51 by Molmil
CRYSTAL STRUCTURE OF CASPASE-7 COMPLEXED WITH XIAP
分子名称: CASPASE-7 SUBUNIT P11, CASPASE-7 SUBUNIT P20, X-LINKED INHIBITOR OF APOPTOSIS PROTEIN
著者Chai, J, Shi, Y.
登録日2001-02-23
公開日2002-02-23
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structural basis of caspase-7 inhibition by XIAP.
Cell(Cambridge,Mass.), 104, 2001
1G73
DownloadVisualize
BU of 1g73 by Molmil
CRYSTAL STRUCTURE OF SMAC BOUND TO XIAP-BIR3 DOMAIN
分子名称: INHIBITORS OF APOPTOSIS-LIKE PROTEIN ILP, SECOND MITOCHONDRIA-DERIVED ACTIVATOR OF CASPASES, ZINC ION
著者Wu, G, Chai, J, Suber, T.L, Wu, J.-W, Shi, Y.
登録日2000-11-08
公開日2001-01-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis of IAP recognition by Smac/DIABLO.
Nature, 408, 2000
1JD6
DownloadVisualize
BU of 1jd6 by Molmil
Crystal Structure of DIAP1-BIR2/Hid Complex
分子名称: APOPTOSIS 1 INHIBITOR, ZINC ION, head involution defective protein
著者Wu, J.W, Cocina, A.E, Chai, J, Hay, B.A, Shi, Y.
登録日2001-06-12
公開日2001-12-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of a functional DIAP1 fragment bound to grim and hid peptides.
Mol.Cell, 8, 2001
1JD4
DownloadVisualize
BU of 1jd4 by Molmil
Crystal Structure of DIAP1-BIR2
分子名称: APOPTOSIS 1 INHIBITOR, ZINC ION
著者Wu, J.W, Cocina, A.E, Chai, J, Hay, B.A, Shi, Y.
登録日2001-06-12
公開日2001-12-05
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural analysis of a functional DIAP1 fragment bound to grim and hid peptides.
Mol.Cell, 8, 2001
1JD5
DownloadVisualize
BU of 1jd5 by Molmil
Crystal Structure of DIAP1-BIR2/GRIM
分子名称: APOPTOSIS 1 INHIBITOR, ZINC ION, cell death protein GRIM
著者Wu, J.W, Cocina, A.E, Chai, J, Hay, B.A, Shi, Y.
登録日2001-06-12
公開日2001-12-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural analysis of a functional DIAP1 fragment bound to grim and hid peptides.
Mol.Cell, 8, 2001
2OPY
DownloadVisualize
BU of 2opy by Molmil
Smac mimic bound to BIR3-XIAP
分子名称: 1-({2-[(1S)-1-AMINOETHYL]-1,3-OXAZOL-4-YL}CARBONYL)-L-PROLYL-L-TRYPTOPHAN, Baculoviral IAP repeat-containing protein 4, ZINC ION
著者Wist, A.D, Lu, G, Riedl, S.J, Shi, Y, McLendon, G.L.
登録日2007-01-30
公開日2007-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structure-activity based study of the Smac-binding pocket within the BIR3 domain of XIAP.
Bioorg.Med.Chem., 15, 2007
2PPH
DownloadVisualize
BU of 2pph by Molmil
solution structure of human MEKK3 PB1 domain
分子名称: Mitogen-activated protein kinase kinase kinase 3
著者Hu, Q, Zhang, J, Wu, J, Shi, Y.
登録日2007-04-30
公開日2007-05-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Insight into the Binding Properties of MEKK3 PB1 to MEK5 PB1 from Its Solution Structure.
Biochemistry, 46, 2007
2PKU
DownloadVisualize
BU of 2pku by Molmil
Solution structure of PICK1 PDZ in complex with the carboxyl tail peptide of GluR2
分子名称: PRKCA-binding protein, peptide (GLU)(SER)(VAL)(LYS)(ILE)
著者Pan, L, Wu, H, Shen, C, Shi, Y, Xia, J, Zhang, M.
登録日2007-04-18
公開日2007-11-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Clustering and synaptic targeting of PICK1 requires direct interaction between the PDZ domain and lipid membranes
Embo J., 26, 2007
2Q0O
DownloadVisualize
BU of 2q0o by Molmil
Crystal structure of an anti-activation complex in bacterial quorum sensing
分子名称: 3-OXO-OCTANOIC ACID (2-OXO-TETRAHYDRO-FURAN-3-YL)-AMIDE, Probable transcriptional activator protein traR, Probable transcriptional repressor traM
著者Chen, G, Jeffrey, P.D, Fuqua, C, Shi, Y, Chen, L.
登録日2007-05-22
公開日2007-09-25
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for antiactivation in bacterial quorum sensing.
Proc.Natl.Acad.Sci.Usa, 104, 2007
3R45
DownloadVisualize
BU of 3r45 by Molmil
Structure of a CENP-A-Histone H4 Heterodimer in complex with chaperone HJURP
分子名称: GLYCEROL, Histone H3-like centromeric protein A, Histone H4, ...
著者Hu, H, Liu, Y, Wang, M, Fang, J, Huang, H, Yang, N, Li, Y, Wang, J, Yao, X, Shi, Y, Li, G, Xu, R.M.
登録日2011-03-17
公開日2011-04-06
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of a CENP-A-histone H4 heterodimer in complex with chaperone HJURP
Genes Dev., 25, 2011
2P5B
DownloadVisualize
BU of 2p5b by Molmil
The complex structure of JMJD2A and trimethylated H3K36 peptide
分子名称: FE (II) ION, Histone H3, JmjC domain-containing histone demethylation protein 3A, ...
著者Zhang, G, Chen, Z, Zang, J, Hong, X, Shi, Y.
登録日2007-03-14
公開日2007-06-12
最終更新日2013-11-27
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Structural basis of the recognition of a methylated histone tail by JMJD2A.
Proc.Natl.Acad.Sci.USA, 104, 2007

222926

件を2024-07-24に公開中

PDB statisticsPDBj update infoContact PDBjnumon