Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 1457 results

3VMX
DownloadVisualize
BU of 3vmx by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2012-05-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:The cytoplasmic coiled-coil mediates cooperative gating temperature sensitivity in the voltage-gated H(+) channel Hv1
Nat Commun, 3, 2012
1D2H
DownloadVisualize
BU of 1d2h by Molmil
CRYSTAL STRUCTURE OF R175K MUTANT GLYCINE N-METHYLTRANSFERASE COMPLEXED WITH S-ADENOSYLHOMOCYSTEINE
Descriptor: GLYCINE N-METHYLTRANSFERASE, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Huang, Y, Komoto, J, Takusagawa, F, Konishi, K, Takata, Y.
Deposit date:1999-10-11
Release date:1999-10-25
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Mechanisms for auto-inhibition and forced product release in glycine N-methyltransferase: crystal structures of wild-type, mutant R175K and S-adenosylhomocysteine-bound R175K enzymes.
J.Mol.Biol., 298, 2000
7FFH
DownloadVisualize
BU of 7ffh by Molmil
Diarylpentanoid-producing polyketide synthase (N199L mutant)
Descriptor: Type III polyketide synthase
Authors:Morita, H, Wong, C.P, Liu, Q, Takeshi, K, Lee, Y, Nakashima, Y.
Deposit date:2021-07-23
Release date:2022-01-19
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Identification of a diarylpentanoid-producing polyketide synthase revealing an unusual biosynthetic pathway of 2-(2-phenylethyl)chromones in agarwood.
Nat Commun, 13, 2022
3VN0
DownloadVisualize
BU of 3vn0 by Molmil
Crystal Structure of a parallel coiled-coil dimerization domain from the voltage-gated proton channel (mutation/C245S)
Descriptor: Voltage-gated hydrogen channel 1
Authors:Fujiwara, Y, Takeshita, K, Kobayashi, M, Okamura, Y, Nakagawa, A.
Deposit date:2011-12-19
Release date:2013-01-30
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Crystal Structure of a Parallel Coiled-Coil Dimerization Domain from the Voltage-Gated Proton Channel (Mutation/C245S)
To be Published
7DY0
DownloadVisualize
BU of 7dy0 by Molmil
1.93 A cryo-EM structure of streptavidin
Descriptor: Streptavidin
Authors:Hiraizumi, M, Yamashita, K, Nishizawa, T, Kikkawa, M, Nureki, O.
Deposit date:2021-01-20
Release date:2021-02-10
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (1.93 Å)
Cite:1.93 A cryo-EM structure of streptavidin
To Be Published
1FNX
DownloadVisualize
BU of 1fnx by Molmil
SOLUTION STRUCTURE OF THE HUC RBD1-RBD2 COMPLEXED WITH THE AU-RICH ELEMENT
Descriptor: AU-RICH RNA ELEMENT, HU ANTIGEN C
Authors:Inoue, M, Hirao, M, Kasashima, K, Kim, I.-S, Kawai, G, Kigawa, T, Sakamoto, H, Muto, Y, Yokoyama, S.
Deposit date:2000-08-24
Release date:2003-06-24
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of mouse HuC RNA-binding domains complexed with an AU-Rich element reveals determinants of neuronal differentiation
To be Published, 2000
1FX3
DownloadVisualize
BU of 1fx3 by Molmil
CRYSTAL STRUCTURE OF H. INFLUENZAE SECB
Descriptor: PROTEIN-EXPORT PROTEIN SECB
Authors:Xu, Z, Knafels, J.D, Yoshino, K.
Deposit date:2000-09-25
Release date:2000-12-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of the bacterial protein export chaperone secB.
Nat.Struct.Biol., 7, 2000
7DDT
DownloadVisualize
BU of 7ddt by Molmil
Ancestral myoglobin aMbSe of Enaliarctos relative (imidazol ligand)
Descriptor: Ancestral myoglobin aMbSe, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T.
Deposit date:2020-10-29
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals.
Iscience, 24, 2021
7DDR
DownloadVisualize
BU of 7ddr by Molmil
Ancestral myoglobin aMbSp of Puijila Darwini relative (imidazol ligand)
Descriptor: Ancestral myoglobin aMbSp, IMIDAZOLE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T.
Deposit date:2020-10-29
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals.
Iscience, 24, 2021
7DDS
DownloadVisualize
BU of 7dds by Molmil
Ancestral myoglobin aMbSp of Puijila Darwini relative
Descriptor: Ancestral myoglobin aMbSp, PROTOPORPHYRIN IX CONTAINING FE
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T.
Deposit date:2020-10-29
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals.
Iscience, 24, 2021
7DDU
DownloadVisualize
BU of 7ddu by Molmil
Elephant seal myoglobin esMb
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Isogai, Y, Imamura, H, Nakae, S, Sumi, T, Takahashi, K, Shirai, T.
Deposit date:2020-10-29
Release date:2021-09-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Common and unique strategies of myoglobin evolution for deep-sea adaptation of diving mammals.
Iscience, 24, 2021
1GCW
DownloadVisualize
BU of 1gcw by Molmil
CO form hemoglobin from mustelus griseus
Descriptor: CARBON MONOXIDE, PROTEIN (HEMOGLOBIN), PROTOPORPHYRIN IX CONTAINING FE
Authors:Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
Deposit date:2000-08-08
Release date:2000-09-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.
J.Mol.Biol., 307, 2001
7KPX
DownloadVisualize
BU of 7kpx by Molmil
Structure of the yeast CKM
Descriptor: Mediator of RNA polymerase II transcription subunit 12, Mediator of RNA polymerase II transcription subunit 13, Meiotic mRNA stability protein kinase SSN3, ...
Authors:Li, Y.C, Chao, T.C, Kim, H.J, Cholko, T, Chen, S.F, Nakanishi, K, Chang, C.E, Murakami, K, Garcia, B.A, Boyer, T.G, Tsai, K.L.
Deposit date:2020-11-12
Release date:2021-01-27
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structure and noncanonical Cdk8 activation mechanism within an Argonaute-containing Mediator kinase module.
Sci Adv, 7, 2021
1GCV
DownloadVisualize
BU of 1gcv by Molmil
DEOXY FORM HEMOGLOBIN FROM MUSTELUS GRISEUS
Descriptor: HEMOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE
Authors:Naoi, Y, Chong, K.T, Yoshimatsu, K, Miyazaki, G, Tame, J.R.H, Park, S.Y, Adachi, S.I, Morimoto, H.
Deposit date:2000-08-08
Release date:2000-08-31
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:The functional similarity and structural diversity of human and cartilaginous fish hemoglobins.
J.Mol.Biol., 307, 2001
1GYF
DownloadVisualize
BU of 1gyf by Molmil
GYF DOMAIN FROM HUMAN CD2BP2 PROTEIN
Descriptor: PROTEIN (CYTOPLASMIC DOMAIN BINDING PROTEIN (CD2BP2))
Authors:Freund, C, Doetsch, V, Nishizawa, K, Reinherz, E.L, Wagner, G.
Deposit date:1999-04-30
Release date:2000-01-05
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The GYF domain is a novel structural fold that is involved in lymphoid signaling through proline-rich sequences.
Nat.Struct.Biol., 6, 1999
1H0I
DownloadVisualize
BU of 1h0i by Molmil
Complex of a chitinase with the natural product cyclopentapeptide argifin from Gliocladium
Descriptor: ARGIFIN, CHITINASE B, GLYCEROL, ...
Authors:Houston, D.R, Shiomi, K, Arai, N, Omura, S, Peter, M.G, Turberg, A, Synstad, B, Eijsink, V.G.H, Aalten, D.M.F.
Deposit date:2002-06-19
Release date:2002-06-27
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:High Resolution Inhibited Complexes of a Chitinase with Natural Product Cyclopentapeptides - Peptide Mimicry of a Carbohydrate Substrate
Proc.Natl.Acad.Sci.USA, 99, 2002
6IRU
DownloadVisualize
BU of 6iru by Molmil
Crystal structure of Peptidase E from Deinococcus radiodurans in P6422 space group
Descriptor: peptidase DR_1070
Authors:Yadav, P, Chandravanshi, K, Kumar, A, Makde, R.D.
Deposit date:2018-11-14
Release date:2019-11-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Catalytic triad heterogeneity in S51 peptidase family: Structural basis for functional variability.
Proteins, 87, 2019
2LC2
DownloadVisualize
BU of 2lc2 by Molmil
Solution structure of the RXLR effector P. capsici AVR3a4
Descriptor: AVR3a4
Authors:Li, H, Koshiba, S, Yaeno, T, Sato, M, Watanabe, S, Harada, T, Shirasu, K, Kigawa, T.
Deposit date:2011-04-12
Release date:2011-08-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A PIP-binding interface in the oomycete RXLR effector AVR3A is required for its accumulation in host cells to modulate plant immunity
To be Published
1IXC
DownloadVisualize
BU of 1ixc by Molmil
Crystal structure of CbnR, a LysR family transcriptional regulator
Descriptor: LysR-type regulatory protein
Authors:Muraoka, S, Okumura, R, Ogawa, N, Miyashita, K, Senda, T.
Deposit date:2002-06-18
Release date:2003-06-18
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Full-length LysR-type Transcriptional Regulator, CbnR: Unusual Combination of Two Subunit Forms and Molecular Bases for Causing and Changing DNA Bend
J.Mol.Biol., 328, 2003
7DU8
DownloadVisualize
BU of 7du8 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Selpercatinib
Descriptor: Proto-oncogene tyrosine-protein kinase receptor Ret, Selpercatinib
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-02-02
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
1IZ1
DownloadVisualize
BU of 1iz1 by Molmil
CRYSTAL STRUCTURE OF CBNR, A LYSR FAMILY TRANSCRIPTIONAL REGULATOR
Descriptor: LysR-type regulatory protein
Authors:Muraoka, S, Okumura, R, Ogawa, N, Miyashita, K, Senda, T.
Deposit date:2002-09-18
Release date:2003-05-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal Structure of a Full-length LysR-type Transcriptional Regulator, CbnR: Unusual Combination of Two Subunit Forms and Molecular Bases for Causing and Changing DNA Bend
J.Mol.Biol., 328, 2003
7DUA
DownloadVisualize
BU of 7dua by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with 4-amino-7-(1-methylcyclopropyl)-N-(5-methyl-1H-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide
Descriptor: 4-azanyl-7-(1-methylcyclopropyl)-~{N}-(5-methyl-1~{H}-pyrazol-3-yl)pyrrolo[2,3-d]pyrimidine-5-carboxamide, Proto-oncogene tyrosine-protein kinase receptor Ret
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
7DU9
DownloadVisualize
BU of 7du9 by Molmil
Crystal structure of human Proto-oncogene tyrosine-protein kinase receptor Ret in complex with Pralsetinib
Descriptor: Pralsetinib, Proto-oncogene tyrosine-protein kinase receptor Ret
Authors:Miyazaki, I, Ishida, K, Suzuki, T.
Deposit date:2021-01-08
Release date:2022-01-12
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Selective RET inhibitor TAS0953/HM06
To be published
6KGA
DownloadVisualize
BU of 6kga by Molmil
Structure of Ovalbumin from Emu (Dromaius novaehollandiae)
Descriptor: Ovalbumin
Authors:Yasutake, Y, Maehashi, K, Matano, M, Takeuchi, J.
Deposit date:2019-07-11
Release date:2019-07-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structure of Emu (Dromaius novaehollandiae) ovalbumin revealed alpha-1-antitrypsin-like domain-swapped trimer.
To Be Published
2N5J
DownloadVisualize
BU of 2n5j by Molmil
Regnase-1 N-terminal domain
Descriptor: Ribonuclease ZC3H12A
Authors:Yokogawa, M, Tsushima, T, Noda, N.N, Kumeta, H, Adachi, W, Enokizono, Y, Yamashita, K, Standley, D.M, Takeuchi, O, Akira, S, Inagaki, F.
Deposit date:2015-07-18
Release date:2016-03-16
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis for the regulation of enzymatic activity of Regnase-1 by domain-domain interactions
Sci Rep, 6, 2016

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon