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PDB: 1022 件

3ILB
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Crystal structure of mouse Bcl-xl mutant (R139A) at pH 6.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-08-07
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3IHD
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BU of 3ihd by Molmil
Crystal structure of mouse Bcl-xl mutant (Y101A) at pH 5.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-07-30
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3IHF
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Crystal structure of mouse Bcl-xl mutant (R139A) at pH 5.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-07-30
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3IIH
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Crystal structure of mouse Bcl-xl (wt) at pH 6.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-08-01
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3IHE
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BU of 3ihe by Molmil
Crystal structure of mouse Bcl-xl mutant (F105A) at pH 6.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-07-30
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 394, 2010
3ILC
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BU of 3ilc by Molmil
Crystal structure of mouse Bcl-xl mutant (Y101A) at pH 6.0
分子名称: Bcl-2-like protein 1
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-08-07
公開日2010-04-14
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Structural insights into mouse anti-apoptotic Bcl-xl reveal affinity for Beclin 1 and gossypol.
Biochem.Biophys.Res.Commun., 2010
7EV7
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Bovine heart cytochrome c oxidase in the carbon monoxide-bound fully reduced state at a 50 K
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Shimada, A, Yoshikawa, S, Tsukihara, T.
登録日2021-05-20
公開日2021-07-14
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structure of CO-bound fully reduced state of bovine heart cytochrome c oxidase
To Be Published
1IPF
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TROPINONE REDUCTASE-II COMPLEXED WITH NADPH AND TROPINONE
分子名称: 8-METHYL-8-AZABICYCLO[3,2,1]OCTAN-3-ONE, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, TROPINONE REDUCTASE-II
著者Yamashita, A, Endo, M, Higashi, T, Nakatsu, T, Yamada, Y, Oda, J, Kato, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-05-09
公開日2003-06-03
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Capturing Enzyme Structure Prior to Reaction Initiation: Tropinone Reductase-II-Substrate Complexes
BIOCHEMISTRY, 42, 2003
7M1V
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Structure of Zika virus NS2b-NS3 protease mutant binding the compound NSC86314 in the super-open conformation
分子名称: 1,2-ETHANEDIOL, 4-(2-{2,4-diamino-5-[2-(4-{[(2E)-1,3-thiazolidin-2-ylidene]sulfamoyl}phenyl)hydrazinyl]phenyl}hydrazinyl)-N-[(2S)-1,3-thiazolidin-2-yl]benzene-1-sulfonamide, CHLORIDE ION, ...
著者Aleshin, A.E, Shiryaev, S.A, Liddington, R.C.
登録日2021-03-15
公開日2021-04-21
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献To be provided
To Be Published
3GNT
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BU of 3gnt by Molmil
Crystal Structure of the Staphylococcus aureus Enoyl-Acyl Carrier Protein Reductase (FabI) in apo form (two molecules in AU)
分子名称: Enoyl-[acyl-carrier-protein] reductase [NADH]
著者Priyadarshi, A, Hwang, K.Y.
登録日2009-03-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Structural insights into Staphylococcus aureus enoyl-ACP reductase (FabI), in complex with NADP and triclosan.
Proteins, 78, 2010
6M4I
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Structure of CENP-E motor domain at 1.9 angstrom resolution
分子名称: ADENOSINE-5'-DIPHOSPHATE, Centromere-associated protein E, MAGNESIUM ION
著者Shibuya, A, Yokoyama, H.
登録日2020-03-07
公開日2021-03-10
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structure and comparison of the motor domain ofcentromere-associated protein E
Acta Crystallogr.,Sect.D, 77, 2021
6BDN
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Crystal structure of human TAO3 kinase binding ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Aleshin, A.E, Bankton, L.A, Pinkerton, A, Courtneidge, S.A, Liddington, R.C.
登録日2017-10-23
公開日2019-04-10
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of human TAO3 kinase binding ADP
To Be Published
3B0T
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BU of 3b0t by Molmil
Human VDR ligand binding domain in complex with maxacalcitol
分子名称: (1S,3R,5Z,7E,14beta,17alpha,20S)-20-(3-hydroxy-3-methylbutoxy)-9,10-secopregna-5,7,10-triene-1,3-diol, SULFATE ION, Vitamin D3 receptor
著者Hishiki, A, Hashimoto, H, Sato, M, Shimizu, T.
登録日2011-06-14
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Human VDR ligand binding domain in complex with maxacalcitol
To be Published
1IQ0
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THERMUS THERMOPHILUS ARGINYL-TRNA SYNTHETASE
分子名称: ARGINYL-TRNA SYNTHETASE
著者Shimada, A, Nureki, O, Goto, M, Takahashi, S, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2001-05-24
公開日2001-11-28
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and mutational studies of the recognition of the arginine tRNA-specific major identity element, A20, by arginyl-tRNA synthetase.
Proc.Natl.Acad.Sci.USA, 98, 2001
6K3N
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BU of 6k3n by Molmil
Crystal structure of human estrogen-related receptor gamma ligand binding domain complex with BPA-monoF
分子名称: 2-fluoranyl-4-[2-(4-hydroxyphenyl)propan-2-yl]phenol, Estrogen-related receptor gamma
著者Matsushima, A, Nose, T, Kakuta, Y.
登録日2019-05-21
公開日2020-05-13
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Evaluation of the Influence of Halogenation on the Binding of Bisphenol A to the Estrogen-Related Receptor gamma.
Chem.Res.Toxicol., 33, 2020
3T5O
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BU of 3t5o by Molmil
Crystal Structure of human Complement Component C6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CADMIUM ION, Complement component C6, ...
著者Aleshin, A.E, Stec, B, Bankston, L.A, DiScipio, R.G, Liddington, R.C.
登録日2011-07-27
公開日2012-02-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.869 Å)
主引用文献Structure of Complement C6 Suggests a Mechanism for Initiation and Unidirectional, Sequential Assembly of Membrane Attack Complex (MAC).
J.Biol.Chem., 287, 2012
4O24
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DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities
分子名称: (5~{Z})-5-[(4-hydroxyphenyl)methylidene]-3-(2-methylpropyl)-2-sulfanylidene-1,3-thiazolidin-4-one, Exonuclease, putative, ...
著者Shibata, A, Moiani, D, Arvai, A.S, Perry, J, Harding, S.M, Genois, M, Maity, R, Rossum-Fikkert, S, Kertokalio, A, Romoli, F, Ismail, A, Ismalaj, E, Petricci, E, Neale, M.J, Bristow, R.G, Masson, J, Wyman, C, Jeggo, P.A, Tainer, J.A.
登録日2013-12-16
公開日2014-01-15
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities.
Mol.Cell, 53, 2014
4NZV
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DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities
分子名称: Exonuclease, putative, MANGANESE (II) ION
著者Shibata, A, Moiani, D, Arvai, A.S, Perry, J, Harding, S.M, Genois, M, Maity, R, Rossum-Fikkert, S, Kertokalio, A, Romoli, F, Ismail, A, Ismalaj, E, Petricci, E, Neale, M.J, Bristow, R.G, Masson, J, Wyman, C, Jeggo, P.A, Tainer, J.A.
登録日2013-12-12
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.901 Å)
主引用文献DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities.
Mol.Cell, 53, 2014
4O4K
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BU of 4o4k by Molmil
DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities
分子名称: (5~{E})-2-azanylidene-5-[(4-hydroxyphenyl)methylidene]-1,3-thiazolidin-4-one, Exonuclease, putative, ...
著者Shibata, A, Moiani, D, Arvai, A.S, Perry, J, Harding, S.M, Genois, M, Maity, R, Rossum-Fikkert, S, Kertokalio, A, Romoli, F, Ismail, A, Ismalaj, E, Petricci, E, Neale, M.J, Bristow, R.G, Masson, J, Wyman, C, Jeggo, P.A, Tainer, J.A.
登録日2013-12-18
公開日2014-01-08
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献DNA Double-Strand Break Repair Pathway Choice Is Directed by Distinct MRE11 Nuclease Activities.
Mol.Cell, 53, 2014
4N5G
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Crystal Structure of RXRa LBD complexed with a synthetic modulator K8012
分子名称: 5-(2-{(1Z)-5-fluoro-2-methyl-1-[4-(propan-2-yl)benzylidene]-1H-inden-3-yl}ethyl)-1H-tetrazole, Retinoic acid receptor RXR-alpha
著者Aleshin, A.E, Su, Y, Zhang, X, Liddington, R.C.
登録日2013-10-09
公開日2014-05-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Sulindac-Derived RXR alpha Modulators Inhibit Cancer Cell Growth by Binding to a Novel Site.
Chem.Biol., 21, 2014
1GAI
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BU of 1gai by Molmil
GLUCOAMYLASE-471 COMPLEXED WITH D-GLUCO-DIHYDROACARBOSE
分子名称: 4,6-dideoxy-4-{[(1S,2S,3S,4R,5R)-2,3,4-trihydroxy-5-(hydroxymethyl)cyclohexyl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, GLUCOAMYLASE-471, alpha-D-mannopyranose, ...
著者Aleshin, A.E, Stoffer, B, Firsov, L.M, Svensson, B, Honzatko, R.B.
登録日1996-03-06
公開日1996-08-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystallographic complexes of glucoamylase with maltooligosaccharide analogs: relationship of stereochemical distortions at the nonreducing end to the catalytic mechanism.
Biochemistry, 35, 1996
4N8R
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Crystal structure of RXRa LBD complexed with a synthetic modulator K-8008
分子名称: 5-(2-{(1Z)-2-methyl-1-[4-(propan-2-yl)benzylidene]-1H-inden-3-yl}ethyl)-1H-tetrazole, Retinoic acid receptor RXR-alpha
著者Aleshin, A.E, Su, Y, Zhang, X, Liddington, R.C.
登録日2013-10-17
公開日2014-05-14
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Sulindac-Derived RXR alpha Modulators Inhibit Cancer Cell Growth by Binding to a Novel Site.
Chem.Biol., 21, 2014
1GAH
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BU of 1gah by Molmil
GLUCOAMYLASE-471 COMPLEXED WITH ACARBOSE
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, GLUCOAMYLASE-471, alpha-D-mannopyranose, ...
著者Aleshin, A.E, Stoffer, B, Firsov, L.M, Svensson, B, Honzatko, R.B.
登録日1996-03-06
公開日1996-08-17
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystallographic complexes of glucoamylase with maltooligosaccharide analogs: relationship of stereochemical distortions at the nonreducing end to the catalytic mechanism.
Biochemistry, 35, 1996
7V5N
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Crystal structure of Fab fragment of bevacizumab bound to DNA aptamer
分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*GP*CP*GP*GP*TP*TP*GP*GP*TP*GP*GP*TP*AP*GP*TP*TP*AP*CP*GP*TP*TP*CP*GP*C)-3'), IMIDAZOLE, ...
著者Hishiki, A, Tong, J, Todoroki, K, Hashimoto, H.
登録日2021-08-17
公開日2022-02-02
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Development of a DNA aptamer that binds to the complementarity-determining region of therapeutic monoclonal antibody and affinity improvement induced by pH-change for sensitive detection.
Biosens.Bioelectron., 203, 2022
5Y60
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V/A-type ATPase/synthase from Thermus thermophilus, rotational state 3.
分子名称: ADENOSINE-5'-DIPHOSPHATE, V-type ATP synthase alpha chain, V-type ATP synthase beta chain, ...
著者Nakanishi, A, Kishikawa, J, Tamakoshi, M, Mitsuoka, K, Yokoyama, K.
登録日2017-08-10
公開日2018-01-17
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (7.5 Å)
主引用文献Cryo EM structure of intact rotary H+-ATPase/synthase from Thermus thermophilus
Nat Commun, 9, 2018

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