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PDB: 263 results

3GJ9
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BU of 3gj9 by Molmil
crystal structure of TIP-1 in complex with c-terminal of Kir2.3
Descriptor: C-terminal peptide from Inward rectifier potassium channel 4, CHLORIDE ION, Tax1-binding protein 3, ...
Authors:Shen, Y.
Deposit date:2009-03-08
Release date:2009-12-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Molecular mechanism of inward rectifier potassium channel 2.3 regulation by tax-interacting protein-1
J.Mol.Biol., 392, 2009
8VCT
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BU of 8vct by Molmil
CyoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 6:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA (50-MER), MAGNESIUM ION, ...
Authors:Shen, Y, Guarne, A.
Deposit date:2023-12-14
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.83 Å)
Cite:Assembly of the Tn7 targeting complex by a regulated stepwise process.
Mol.Cell, 84, 2024
8VCJ
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BU of 8vcj by Molmil
CryoEM structure of the TnsC(1-503)-TnsD(1-318)-DNA complex in a 7:2:1 stoichiometry from E. coli Tn7 bound to ATPgS and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA, MAGNESIUM ION, ...
Authors:Shen, Y, Guarne, A.
Deposit date:2023-12-14
Release date:2024-07-31
Method:ELECTRON MICROSCOPY (3.32 Å)
Cite:Assembly of the Tn7 targeting complex by a regulated stepwise process.
Mol.Cell, 84, 2024
3EAP
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BU of 3eap by Molmil
Crystal structure of the RhoGAP domain of ARHGAP11A
Descriptor: Rho GTPase-activating protein 11A, UNKNOWN ATOM OR ION
Authors:Shen, Y, Shen, L, Tong, Y, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
Deposit date:2008-08-26
Release date:2008-09-02
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the RhoGAP domain of ARHGAP11A
To be Published
1PK0
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BU of 1pk0 by Molmil
Crystal Structure of the EF3-CaM complexed with PMEApp
Descriptor: (ADENIN-9-YL-ETHOXYMETHYL)-HYDROXYPHOSPHINYL-DIPHOSPHATE, CALCIUM ION, Calmodulin, ...
Authors:Shen, Y, Tang, W.J.
Deposit date:2003-06-04
Release date:2004-02-10
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Selective inhibition of anthrax edema factor by adefovir, a drug for chronic hepatitis B virus infection.
Proc.Natl.Acad.Sci.USA, 101, 2004
3JZY
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BU of 3jzy by Molmil
Crystal structure of human Intersectin 2 C2 domain
Descriptor: Intersectin 2, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tempel, W, Tong, Y, Li, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-09-24
Release date:2009-10-06
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Crystal structure of human Intersectin 2 C2 domain
To be Published
1S26
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BU of 1s26 by Molmil
Structure of Anthrax Edema Factor-Calmodulin-alpha,beta-methyleneadenosine 5'-triphosphate Complex Reveals an Alternative Mode of ATP Binding to the Catalytic Site
Descriptor: CALCIUM ION, Calmodulin, Calmodulin-sensitive adenylate cyclase, ...
Authors:Shen, Y, Zhukovskaya, N.L, Bohm, A, Tang, W.-J.
Deposit date:2004-01-08
Release date:2004-04-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of anthrax edema factor-calmodulin-adenosine-5'-(alpha,beta-methylene)-triphosphate complex reveals an alternative mode of ATP binding to the catalytic site
Biochem.Biophys.Res.Commun., 317, 2004
7MBW
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BU of 7mbw by Molmil
Crystal structure of TnsC(1-503)A225V
Descriptor: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, Transposon Tn7 transposition protein TnsC
Authors:Shen, Y, Guarne, A.
Deposit date:2021-04-01
Release date:2022-02-23
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structural basis for DNA targeting by the Tn7 transposon.
Nat.Struct.Mol.Biol., 29, 2022
7MCS
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BU of 7mcs by Molmil
Cryo-electron microscopy structure of TnsC(1-503)A225V bound to DNA
Descriptor: DNA (5'-D(P*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION, ...
Authors:Shen, Y, Ortega, J, Guarne, A.
Deposit date:2021-04-02
Release date:2022-02-23
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.56 Å)
Cite:Structural basis for DNA targeting by the Tn7 transposon.
Nat.Struct.Mol.Biol., 29, 2022
3KH0
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BU of 3kh0 by Molmil
Crystal structure of the Ras-association (RA) domain of RALGDS
Descriptor: Ral guanine nucleotide dissociation stimulator, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tempel, W, Wang, H, Tong, Y, Guan, X, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-10-29
Release date:2009-11-17
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of the Ras-association (RA) domain of RALGDS
to be published
1LVC
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BU of 1lvc by Molmil
Crystal structure of the adenylyl cyclase domain of anthrax edema factor (EF) in complex with calmodulin and 2' deoxy, 3' anthraniloyl ATP
Descriptor: 3'ANTHRANILOYL-2'-DEOXY-ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, YTTERBIUM (III) ION, ...
Authors:Shen, Y, Lee, Y.-S, Soelaiman, S, Bergson, P, Lu, D, Chen, A, Beckingham, K, Grabarek, Z, Mrksich, M, Tang, W.-J.
Deposit date:2002-05-28
Release date:2002-12-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Physiological calcium concentrations regulate calmodulin binding and catalysis of adenylyl cyclase exotoxins
Embo J., 21, 2002
3I6D
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BU of 3i6d by Molmil
Crystal structure of PPO from bacillus subtilis with AF
Descriptor: 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, PHOSPHATE ION, ...
Authors:Shen, Y.
Deposit date:2009-07-06
Release date:2009-12-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural insight into unique properties of protoporphyrinogen oxidase from Bacillus subtilis
J.Struct.Biol., 170, 2010
1NR3
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BU of 1nr3 by Molmil
SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212
Descriptor: DNA-binding protein tfx
Authors:Shen, Y, Liu, G, Bhaskaran, R, Yee, A, Arrowsmith, C, Szyperski, T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2003-01-23
Release date:2003-06-10
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:SOLUTION STRUCTURE OF THE PROTEIN MTH0916: THE NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET TT212
To be Published
3KKR
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BU of 3kkr by Molmil
Crystal structure of catalytic core domain of BIV integrase in crystal form I
Descriptor: Integrase, NITRATE ION
Authors:Shen, Y.
Deposit date:2009-11-06
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.453 Å)
Cite:Crystal structures of catalytic core domain of BIV integrase: implications for the interaction between integrase and target DNA
Protein Cell, 1, 2010
3KKS
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BU of 3kks by Molmil
Crystal structure of catalytic core domain of BIV integrase in crystal form II
Descriptor: ACETATE ION, GLYCEROL, Integrase
Authors:Shen, Y.
Deposit date:2009-11-06
Release date:2010-09-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of catalytic core domain of BIV integrase: implications for the interaction between integrase and target DNA
Protein Cell, 1, 2010
2R7I
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BU of 2r7i by Molmil
Crystal structure of catalytic subunit of protein kinase CK2
Descriptor: Casein kinase II subunit alpha, SULFATE ION
Authors:Shen, Y.
Deposit date:2007-09-08
Release date:2008-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.003 Å)
Cite:Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
2R6M
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BU of 2r6m by Molmil
Crystal structure of rat CK2-beta subunit
Descriptor: Casein kinase II subunit beta, ZINC ION
Authors:Shen, Y.
Deposit date:2007-09-06
Release date:2008-09-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of catalytic and regulatory subunits of rat protein kinase CK2
CHIN.SCI.BULL., 54, 2009
3GF9
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BU of 3gf9 by Molmil
Crystal structure of human Intersectin 2 RhoGEF domain
Descriptor: Intersectin 2, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tong, Y, Tempel, W, Li, Y, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2009-02-26
Release date:2009-03-10
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human Intersectin 2 RhoGEF domain
To be Published
3LXX
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BU of 3lxx by Molmil
Crystal structure of human GTPase IMAP family member 4
Descriptor: GTPase IMAP family member 4, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
Authors:Shen, Y, Nedyalkova, L, Tong, Y, Tempel, W, Mackenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Andrews, D.W, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-02-25
Release date:2010-03-09
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of human GTPase IMAP family member 4
to be published
3MPX
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BU of 3mpx by Molmil
Crystal structure of the DH and PH-1 domains of human FGD5
Descriptor: FYVE, RhoGEF and PH domain-containing protein 5, UNKNOWN ATOM OR ION
Authors:Shen, Y, Nedyalkova, L, Tong, Y, Tempel, W, Crombet, L, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-04-27
Release date:2010-06-23
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the DH and PH-1 domains of human FGD5
TO BE PUBLISHED
3NEY
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BU of 3ney by Molmil
Crystal structure of the kinase domain of MPP1/p55
Descriptor: 55 kDa erythrocyte membrane protein, SULFATE ION, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tong, Y, Zhong, N, Guan, X, Tempel, W, MacKenzie, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Weigelt, J, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2010-06-09
Release date:2010-08-04
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Crystal structure of the kinase domain of MPP1/p55
To be Published
3NKS
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BU of 3nks by Molmil
Structure of human protoporphyrinogen IX oxidase
Descriptor: 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, ...
Authors:Shen, Y.
Deposit date:2010-06-21
Release date:2011-04-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural insight into human variegate porphyria disease
Faseb J., 25, 2011
3DZ8
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BU of 3dz8 by Molmil
Crystal structure of human Rab3B GTPase bound with GDP
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Ras-related protein Rab-3B, UNKNOWN ATOM OR ION
Authors:Shen, Y, Tong, Y, Sukumar, D, Tempel, W, Loppnau, P, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Wilkstrom, M, Bochkarev, A, Park, H, Structural Genomics Consortium (SGC)
Deposit date:2008-07-29
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human Rab3B GTPase bound with GDP
To be Published
3DJ3
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BU of 3dj3 by Molmil
Crystal Structure of C-terminal Truncated TIP-1 (6-113)
Descriptor: Tax1-binding protein 3
Authors:Shen, Y.
Deposit date:2008-06-21
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008
3DIW
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BU of 3diw by Molmil
c-terminal beta-catenin bound TIP-1 structure
Descriptor: Tax1-binding protein 3, decameric peptide form Catenin beta-1
Authors:Shen, Y.
Deposit date:2008-06-21
Release date:2008-10-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Basis of beta-Catenin Recognition by Tax-interacting Protein-1
J.Mol.Biol., 384, 2008

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