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PDB: 43 results

4F7V
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BU of 4f7v by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1D (HP26)
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-{[2-({N-[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)carbonyl]glycyl}amino)ethyl]sulfonyl}-5'-deoxyadenosine
Authors:Shaw, G, Shi, G, Ji, X.
Deposit date:2012-05-16
Release date:2012-07-11
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Bisubstrate analog inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New lead exhibits a distinct binding mode.
Bioorg.Med.Chem., 20, 2012
1PON
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BU of 1pon by Molmil
SITE III-SITE IV TROPONIN C HETERODIMER, NMR
Descriptor: TROPONIN C
Authors:Shaw, G.S, Sykes, B.D.
Deposit date:1996-04-02
Release date:1996-11-08
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:NMR solution structure of a synthetic troponin C heterodimeric domain.
Biochemistry, 35, 1996
1CTD
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BU of 1ctd by Molmil
DETERMINATION OF THE SOLUTION STRUCTURE OF A SYNTHETIC TWO-SITE CALCIUM-BINDING HOMODIMERIC PROTEIN DOMAIN BY NMR SPECTROSCOPY
Descriptor: CALCIUM ION, TROPONIN C SITE III - SITE III HOMODIMER
Authors:Shaw, G.S, Sykes, B.D.
Deposit date:1992-11-12
Release date:1993-10-31
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Determination of the solution structure of a synthetic two-site calcium-binding homodimeric protein domain by NMR spectroscopy.
Biochemistry, 31, 1992
1CTA
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BU of 1cta by Molmil
DETERMINATION OF THE SOLUTION STRUCTURE OF A SYNTHETIC TWO-SITE CALCIUM-BINDING HOMODIMERIC PROTEIN DOMAIN BY NMR SPECTROSCOPY
Descriptor: CALCIUM ION, TROPONIN C SITE III - SITE III HOMODIMER
Authors:Shaw, G.S, Sykes, B.D.
Deposit date:1992-11-12
Release date:1993-10-31
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Determination of the solution structure of a synthetic two-site calcium-binding homodimeric protein domain by NMR spectroscopy.
Biochemistry, 31, 1992
2JPF
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BU of 2jpf by Molmil
Bpp3783_115-220
Descriptor: Hypothetical protein
Authors:Shaw, G.S, Revington, M.J, Savichenko, A, Arrowsmith, C.H, Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2007-05-10
Release date:2008-05-20
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Bpp3783_115-220
To be Published
3UDE
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BU of 3ude by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1B
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)methyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine, ACETATE ION
Authors:Shaw, G, Shi, G, Ji, X.
Deposit date:2011-10-28
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012
3UD5
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BU of 3ud5 by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1A
Descriptor: 1,2-ETHANEDIOL, 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-4-oxo-3,4-dihydropteridin-6-yl)methyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine
Authors:Shaw, G, Shi, G, Ji, X.
Deposit date:2011-10-27
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012
3UDV
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BU of 3udv by Molmil
Crystal structure of E. coli HPPK in complex with bisubstrate analogue inhibitor J1C
Descriptor: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, 5'-S-[1-(2-{[(2-amino-7,7-dimethyl-4-oxo-3,4,7,8-tetrahydropteridin-6-yl)carbonyl]amino}ethyl)piperidin-4-yl]-5'-thioadenosine, ACETATE ION
Authors:Shaw, G, Shi, G, Ji, X.
Deposit date:2011-10-28
Release date:2012-01-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Bisubstrate analogue inhibitors of 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase: New design with improved properties.
Bioorg.Med.Chem., 20, 2012
2F09
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BU of 2f09 by Molmil
Solution Structure of the gene product of E. coli gene ydhA
Descriptor: Hypothetical protein ydhA
Authors:Shaw, G.S, Revington, M.J, Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2005-11-12
Release date:2005-12-13
Last modified:2024-10-30
Method:SOLUTION NMR
Cite:The solution structure of the Escherichia coli gene product ydhA.
To be Published
9C5E
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BU of 9c5e by Molmil
Covalent Complex Between Parkin Catalytic (Rcat) Domain and Ubiquitin
Descriptor: E3 ubiquitin-protein ligase parkin, Polyubiquitin-B, ZINC ION
Authors:Connelly, E.M, Rintala-Dempsey, A.C, Gundogdu, M, Freeman, E.A, Koszela, J, Aguirre, J.D, Zhu, G, Kamarainen, O, Tadayon, R, Walden, H, Shaw, G.S.
Deposit date:2024-06-06
Release date:2024-08-14
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Capturing the catalytic intermediates of parkin ubiquitination.
Proc.Natl.Acad.Sci.USA, 121, 2024
1F6V
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BU of 1f6v by Molmil
SOLUTION STRUCTURE OF THE C TERMINAL OF MU B TRANSPOSITION PROTEIN
Descriptor: DNA TRANSPOSITION PROTEIN
Authors:Hung, L.-H, Chaconas, G, Shaw, G.S.
Deposit date:2000-06-23
Release date:2000-11-08
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:The solution structure of the C-terminal domain of the Mu B transposition protein.
EMBO J., 19, 2000
1SX1
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BU of 1sx1 by Molmil
Solution NMR Structure and X-ray Absorption Analysis of the C-Terminal Zinc-Binding Domain of the SecA ATPase
Descriptor: SecA, ZINC ION
Authors:Dempsey, B.R, Wrona, M, Moulin, J.M, Gloor, G.B, Jalilehvand, F, Lajoie, G, Shaw, G.S, Shilton, B.H.
Deposit date:2004-03-30
Release date:2004-07-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR Structure and X-ray Absorption Analysis of the C-Terminal Zinc-Binding Domain of the SecA ATPase.
Biochemistry, 43, 2004
1SX0
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BU of 1sx0 by Molmil
Solution NMR Structure and X-Ray Absorption Analysis of the C-Terminal Zinc-Binding Domain of the SecA ATPase
Descriptor: SecA
Authors:Dempsey, B.R, Wrona, M, Moulin, J.M, Gloor, G.B, Jalilehvand, F, Lajoie, G, Shaw, G.S, Shilton, B.H.
Deposit date:2004-03-30
Release date:2004-07-06
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution NMR Structure and X-ray Absorption Analysis of the C-Terminal Zinc-Binding Domain of the SecA ATPase.
Biochemistry, 43, 2004
6N13
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BU of 6n13 by Molmil
UbcH7-Ub Complex with R0RBR Parkin and phosphoubiquitin
Descriptor: E3 ubiquitin-protein ligase parkin, Ubiquitin-conjugating enzyme E2 L3, ZINC ION, ...
Authors:Condos, T.E.C, Dunkerley, K.M, Freeman, E.A, Barber, K.R, Aguirre, J.D, Chaugule, V.K, Xiao, Y, Konermann, L, Walden, H, Shaw, G.S.
Deposit date:2018-11-08
Release date:2018-11-28
Last modified:2024-11-13
Method:SOLUTION NMR
Cite:Synergistic recruitment of UbcH7~Ub and phosphorylated Ubl domain triggers parkin activation.
EMBO J., 37, 2018
1FXT
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BU of 1fxt by Molmil
STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTER COMPLEX
Descriptor: UBIQUITIN, UBIQUITIN-CONJUGATING ENZYME E2-24 KDA
Authors:Hamilton, K.S, Shaw, G.S, Williams, R.S, Huzil, J.T, McKenna, S, Ptak, C, Glover, M, Ellison, M.J.
Deposit date:2000-09-26
Release date:2001-10-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of a conjugating enzyme-ubiquitin thiolester intermediate reveals a novel role for the ubiquitin tail.
Structure, 9, 2001
2PRU
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BU of 2pru by Molmil
NMR Structure of Human apoS100B at 10C
Descriptor: Protein S100-B
Authors:Malik, S, Shaw, G.S, Revington, M.
Deposit date:2007-05-04
Release date:2008-04-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Analysis of the structure of human apo-S100B at low temperature indicates a unimodal conformational distribution is adopted by calcium-free S100 proteins.
Proteins, 73, 2008
7K6B
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BU of 7k6b by Molmil
Solution Structure of the Dysferlin C2A Domain in its Calcium-free State
Descriptor: Isoform 15 of Dysferlin
Authors:Wang, Y, Mercier, P, Santamaria, L, Shaw, G.S.
Deposit date:2020-09-19
Release date:2021-01-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Calcium binds and rigidifies the dysferlin C2A domain in a tightly coupled manner.
Biochem.J., 478, 2021
7JOF
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BU of 7jof by Molmil
Calcium-bound C2A Domain from Human Dysferlin
Descriptor: CALCIUM ION, Isoform 6 of Dysferlin
Authors:Tadayon, R, Wang, Y, Santamaria, L, Mercier, P, Forristal, C, Shaw, G.S.
Deposit date:2020-08-06
Release date:2021-06-16
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2 Å)
Cite:Calcium binds and rigidifies the dysferlin C2A domain in a tightly coupled manner.
Biochem.J., 478, 2021
7KRB
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BU of 7krb by Molmil
Solution Structure of the Dysferlin C2A Domain in its Calcium-bound State
Descriptor: Isoform 15 of Dysferlin
Authors:Wang, Y, Mercier, P, Santamaria, L, Shaw, G.S.
Deposit date:2020-11-19
Release date:2021-01-27
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Calcium binds and rigidifies the dysferlin C2A domain in a tightly coupled manner.
Biochem.J., 478, 2021
5C1Z
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BU of 5c1z by Molmil
Parkin (UblR0RBR)
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:kumar, A, Aguirre, J.D, Condos, T.E.C, Martinez-Torres, R.J, Chaugule, V.K, Toth, R, Sundaramoorthy, R, Mercier, P, Knebel, A, Spratt, D.E, Barber, K.R, Shaw, G.S, Walden, H.
Deposit date:2015-06-15
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis.
Embo J., 34, 2015
5C23
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BU of 5c23 by Molmil
Parkin (S65DUblR0RBR)
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:Kumar, A, Aguirre, J.D, Condos, T.E.C, Martinez-Torres, R.J, Chaugule, V.K, Toth, R, Sundaramoorthy, R, Mercier, P, Knebel, A, Spratt, D.E, Barber, K.R, Shaw, G.S, Walden, H.
Deposit date:2015-06-15
Release date:2015-07-29
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Disruption of the autoinhibited state primes the E3 ligase parkin for activation and catalysis.
Embo J., 34, 2015
1UWO
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BU of 1uwo by Molmil
CALCIUM FORM OF HUMAN S100B, NMR, 20 STRUCTURES
Descriptor: S100B
Authors:Smith, S.P, Shaw, G.S.
Deposit date:1997-12-05
Release date:1998-06-10
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:A novel calcium-sensitive switch revealed by the structure of human S100B in the calcium-bound form.
Structure, 6, 1998
2ASY
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BU of 2asy by Molmil
Solution Structure of ydhR protein from Escherichia coli
Descriptor: Protein ydhR precursor
Authors:Revington, M, Semesi, A, Yee, A, Shaw, G.S, Ontario Centre for Structural Proteomics (OCSP)
Deposit date:2005-08-24
Release date:2005-11-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the Escherichia coli protein ydhR: A putative mono-oxygenase.
Protein Sci., 14, 2005
5TR5
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BU of 5tr5 by Molmil
Solution structure of Serine 65 phosphorylated UBL domain from parkin
Descriptor: E3 ubiquitin-protein ligase parkin
Authors:Aguirre, J.D, Dunkerley, K.M, Mercier, P, Shaw, G.S.
Deposit date:2016-10-25
Release date:2016-12-21
Last modified:2024-11-20
Method:SOLUTION NMR
Cite:Structure of phosphorylated UBL domain and insights into PINK1-orchestrated parkin activation.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4DRW
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BU of 4drw by Molmil
Crystal Structure of the Ternary Complex between S100A10, an Annexin A2 N-terminal Peptide and an AHNAK Peptide
Descriptor: Neuroblast differentiation-associated protein AHNAK, Protein S100-A10/Annexin A2 chimeric protein
Authors:Rezvanpour, A, Lee, T.-W, Junop, M.S, Shaw, G.S.
Deposit date:2012-02-17
Release date:2012-10-24
Last modified:2024-11-27
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structure of an asymmetric ternary protein complex provides insight for membrane interaction.
Structure, 20, 2012

 

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