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PDB: 107 results

4XCK
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Vibrio cholerae O395 Ribokinase complexed with ADP, Ribose and Cesium ion.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CESIUM ION, Ribokinase, ...
Authors:Paul, R, Patra, M.D, Sen, U.
Deposit date:2014-12-18
Release date:2015-01-21
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Crystal Structure of Apo and Ligand Bound Vibrio cholerae Ribokinase (Vc-RK): Role of Monovalent Cation Induced Activation and Structural Flexibility in Sugar Phosphorylation.
Adv. Exp. Med. Biol., 842, 2015
4UXD
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2-keto 3-deoxygluconate aldolase from Picrophilus torridus
Descriptor: 1,2-ETHANEDIOL, 2-DEHYDRO-3-DEOXY-D-GLUCONATE/2-DEHYDRO-3-DEOXY-PHOSPHOGLUCONATE ALDOLASE, DI(HYDROXYETHYL)ETHER, ...
Authors:Priftis, A, Zaitsev, V, Reher, M, Johnsen, U, Danson, M.J, Taylor, G.L, Schoenheit, P, Crennell, S.J.
Deposit date:2014-08-22
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Insights into the Substrate Specificity of Archaeal Entner-Doudoroff Aldolases: The Structures of Picrophilus torridus 2-Keto-3-deoxygluconate Aldolase and Sulfolobus solfataricus 2-Keto-3-deoxy-6-phosphogluconate Aldolase in Complex with 2-Keto-3-deoxy-6-phosphogluconate.
Biochemistry, 57, 2018
1F51
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A TRANSIENT INTERACTION BETWEEN TWO PHOSPHORELAY PROTEINS TRAPPED IN A CRYSTAL LATTICE REVEALS THE MECHANISM OF MOLECULAR RECOGNITION AND PHOSPHOTRANSFER IN SINGAL TRANSDUCTION
Descriptor: MAGNESIUM ION, SPORULATION INITIATION PHOSPHOTRANSFERASE B, SPORULATION INITIATION PHOSPHOTRANSFERASE F
Authors:Zapf, J, Sen, U, Madhusudan, M, Hoch, J.A, Varughese, K.I.
Deposit date:2000-06-11
Release date:2000-08-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:A transient interaction between two phosphorelay proteins trapped in a crystal lattice reveals the mechanism of molecular recognition and phosphotransfer in signal transduction.
Structure Fold.Des., 8, 2000
4QG5
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Crystal structure of phosphoglucomutase from Leishmania major at 3.5 angstrom resolution
Descriptor: MAGNESIUM ION, Putative phosphoglucomutase
Authors:Waugh, B, Sen, U, Banerjee, R.
Deposit date:2014-05-22
Release date:2015-05-27
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Crystal structure of phosphoglucomutase from Leishmania major at 3.5 angstrom resolution
To be Published
7V4E
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), SULFATE ION, VpsR
Authors:Chakrabortty, T, Sen, U.
Deposit date:2021-08-12
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (4 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V3W
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, VpsR
Authors:Chakrabortty, T, Sen, U, Chowdhury, S.R.
Deposit date:2021-08-11
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.205 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V2V
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: SULFATE ION, VpsR
Authors:Chakrabortty, T, Sen, U, Chowdhury, S.R.
Deposit date:2021-08-10
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.194 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
7V2B
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Crystal Structure of VpsR display novel dimeric architecture and c-di-GMP binding: mechanistic implications in oligomerization, ATPase activity and DNA binding.
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, VpsR
Authors:Chakrabortty, T, Sen, U.
Deposit date:2021-08-08
Release date:2022-04-06
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal Structure of VpsR Revealed Novel Dimeric Architecture and c-di-GMP Binding Site: Mechanistic Implications in Oligomerization, ATPase Activity and DNA Binding.
J.Mol.Biol., 434, 2022
3TO5
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High resolution structure of CheY3 from Vibrio cholerae
Descriptor: CALCIUM ION, CheY homolog
Authors:Dasgupta, J, Sen, U, Biswas, M.
Deposit date:2011-09-04
Release date:2012-09-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Conformational Barrier of CheY3 and Inability of CheY4 to Bind FliM Control the Flagellar Motor Action in Vibrio cholerae
Plos One, 8, 2013
2ET2
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Crystal structure of an Asn to Ala mutant of Winged Bean Chymotrypsin Inhibitor protein
Descriptor: Chymotrypsin inhibitor 3, NICKEL (II) ION, SULFATE ION
Authors:Dattagupta, J.K, Sen, U, Dasgupta, J, Khamrui, S.
Deposit date:2005-10-27
Release date:2006-06-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Spacer Asn Determines the Fate of Kunitz (STI) Inhibitors, as Revealed by Structural and Biochemical Studies on WCI Mutants.
Biochemistry, 45, 2006
2ESU
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Crystal structure of Asn to Gln mutant of Winged Bean Chymotrypsin Inhibitor protein
Descriptor: Chymotrypsin inhibitor 3, NICKEL (II) ION, SULFATE ION
Authors:Dattagupta, J.K, Sen, U, Dasgupta, J, Khamrui, S.
Deposit date:2005-10-27
Release date:2006-06-13
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Spacer Asn Determines the Fate of Kunitz (STI) Inhibitors, as Revealed by Structural and Biochemical Studies on WCI Mutants.
Biochemistry, 45, 2006
3I29
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Crystal structure of a binary complex between an mutant trypsin inhibitor with bovine trypsin
Descriptor: CALCIUM ION, Cationic trypsin, Chymotrypsin inhibitor 3
Authors:Khamrui, S, Majumder, S, Dasgupta, J, Dattagupta, J.K, Sen, U.
Deposit date:2009-06-29
Release date:2010-06-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Role of remote scaffolding residues in the inhibitory loop pre-organization, flexibility, rigidification and enzyme inhibition of serine protease inhibitors
Biochim.Biophys.Acta, 1824, 2012
3H2X
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Crystal Structure of The Human Lymphoid Tyrosine Phosphatase Catalytic Domain
Descriptor: PHOSPHATE ION, Tyrosine-protein phosphatase non-receptor type 22
Authors:Tsai, S.J, Sen, U.
Deposit date:2009-04-14
Release date:2009-06-02
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of the human lymphoid tyrosine phosphatase catalytic domain: insights into redox regulation .
Biochemistry, 48, 2009
3IQS
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Crystal structure of the anti-viral APOBEC3G catalytic domain
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Holden, L.G, Prochnow, C, Chang, Y.P, Bransteitter, R, Chelico, L, Sen, U, Stevens, R.C, Goodman, R.F, Chen, X.S.
Deposit date:2009-08-20
Release date:2009-11-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications.
Nature, 456, 2008
1PEY
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Crystal structure of the Response Regulator Spo0F complexed with Mn2+
Descriptor: MANGANESE (II) ION, Sporulation initiation phosphotransferase F
Authors:Mukhopadhyay, D, Sen, U, Zapf, J, Varughese, K.I.
Deposit date:2003-05-22
Release date:2004-05-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Metals in the sporulation phosphorelay: manganese binding by the response regulator Spo0F.
Acta Crystallogr.,Sect.D, 60, 2004
1WBC
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CRYSTALLIZATION AND PRELIMINARY X-RAY STUDIES OF PSOPHOCARPIN B1, A CHYMOTRYPSIN INHIBITOR FROM WINGED BEAN SEEDS
Descriptor: CHYMOTRYPSIN INHIBITOR (WCI)
Authors:Dattagupta, J.K, Podder, A, Chakrabarti, C, Sen, U, Dutta, S.K, Singh, M.
Deposit date:1995-11-30
Release date:1996-04-03
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a Kunitz-type chymotrypsin from winged bean seeds at 2.95 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
2BEA
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Crystal structure of Asn14 to Gly mutant of WCI
Descriptor: Chymotrypsin inhibitor 3
Authors:Dattagupta, J.K, Sen, U, Dasgupta, J, Khamrui, S.
Deposit date:2005-10-24
Release date:2006-06-13
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Spacer Asn Determines the Fate of Kunitz (STI) Inhibitors, as Revealed by Structural and Biochemical Studies on WCI Mutants.
Biochemistry, 45, 2006
2BEB
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X-ray structure of Asn to Thr mutant of Winged Bean Chymotrypsin inhibitor
Descriptor: Chymotrypsin inhibitor 3
Authors:Dattagupta, J.K, Sen, U, Dasgupta, J, Khamrui, S.
Deposit date:2005-10-24
Release date:2006-06-13
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Spacer Asn Determines the Fate of Kunitz (STI) Inhibitors, as Revealed by Structural and Biochemical Studies on WCI Mutants.
Biochemistry, 45, 2006
3E1U
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The Crystal Structure of the Anti-Viral APOBEC3G Catalytic Domain
Descriptor: DNA dC->dU-editing enzyme APOBEC-3G, ZINC ION
Authors:Holden, L, Prochnow, C, Chang, Y.P, Bransteitter, R, Chelico, L, Sen, U, Stevens, R.C, Goodman, R.F, Chen, X.S.
Deposit date:2008-08-04
Release date:2008-10-07
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the anti-viral APOBEC3G catalytic domain and functional implications.
Nature, 456, 2008
2QYI
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Crystal structure of a binary complex between an engineered trypsin inhibitor and Bovine trypsin
Descriptor: CALCIUM ION, Cationic trypsin, Chymotrypsin inhibitor 3, ...
Authors:Khamrui, S, Dasgupta, J, Dattagupta, J.K, Sen, U.
Deposit date:2007-08-15
Release date:2008-08-19
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of a binary complex between an engineered trypsin inhibitor and Bovine trypsin
To be Published
2WBC
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REFINED CRYSTAL STRUCTURE (2.3 ANGSTROM) OF A WINGED BEAN CHYMOTRYPSIN INHIBITOR AND LOCATION OF ITS SECOND REACTIVE SITE
Descriptor: CHYMOTRYPSIN INHIBITOR
Authors:Dattagupta, J.K, Podder, A, Chakrabarti, C, Sen, U, Mukhopadhyay, D, Dutta, S.K, Singh, M.
Deposit date:1997-11-26
Release date:1998-02-25
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Refined crystal structure (2.3 A) of a double-headed winged bean alpha-chymotrypsin inhibitor and location of its second reactive site.
Proteins, 35, 1999
1NQP
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BU of 1nqp by Molmil
Crystal structure of Human hemoglobin E at 1.73 A resolution
Descriptor: CYANIDE ION, Hemoglobin alpha chain, Hemoglobin beta chain, ...
Authors:Dasgupta, J, Sen, U, Choudhury, D, Dutta, P, Basu, S, Chakrabarti, A, Chakrabarty, A, Dattagupta, J.K.
Deposit date:2003-01-22
Release date:2004-03-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Crystallization and preliminary X-ray structural Studies of Hemoglobin A2 and Hemoglobin E, isolated from the blood samples of Beta-thalassemic patients
Biochem.Biophys.Res.Commun., 303, 2004
3JQZ
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Crystal Structure of Human serum albumin complexed with Lidocaine
Descriptor: 2-(diethylamino)-N-(2,6-dimethylphenyl)ethanamide, Serum albumin
Authors:Hein, K.L, Kragh-Hansen, U, Morth, J.P, Nissen, P.
Deposit date:2009-09-08
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystallographic analysis reveals a unique lidocaine binding site on human serum albumin.
J.Struct.Biol., 2010
3JRY
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Human Serum albumin with bound Sulfate
Descriptor: SULFATE ION, Serum albumin
Authors:Hein, K.L, Kragh-Hansen, U, Morth, J.P, Nissen, P.
Deposit date:2009-09-09
Release date:2010-04-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic analysis reveals a unique lidocaine binding site on human serum albumin.
J.Struct.Biol., 171, 2010
6S7C
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Crystal structure of CARM1 in complex with inhibitor UM079
Descriptor: 1-[3-[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl-(3-azanylpropyl)amino]propyl]guanidine, Histone-arginine methyltransferase CARM1
Authors:Gunnell, E.A, Muhsen, U, Dowden, J, Dreveny, I.
Deposit date:2019-07-04
Release date:2020-03-04
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural and biochemical evaluation of bisubstrate inhibitors of protein arginine N-methyltransferases PRMT1 and CARM1 (PRMT4).
Biochem.J., 477, 2020

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