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PDB: 535 results

1OVD
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BU of 1ovd by Molmil
THE K136E MUTANT OF LACTOCOCCUS LACTIS DIHYDROOROTATE DEHYDROGENASE A IN COMPLEX WITH OROTATE
Descriptor: DIHYDROOROTATE DEHYDROGENASE A, FLAVIN MONONUCLEOTIDE, GLYCEROL, ...
Authors:Norager, S, Arent, S, Bjornberg, O, Ottosen, M, Lo Leggio, L, Jensen, K.F, Larsen, S.
Deposit date:2003-03-26
Release date:2003-08-19
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Lactococcus lactis dihydroorotate dehydrogenase A mutants reveal important facets of the enzymatic function.
J.Biol.Chem., 278, 2003
1Y93
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BU of 1y93 by Molmil
Crystal structure of the catalytic domain of human MMP12 complexed with acetohydroxamic acid at atomic resolution
Descriptor: ACETOHYDROXAMIC ACID, CALCIUM ION, Macrophage metalloelastase, ...
Authors:Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.-M, Luchinat, C, Mangani, S, Terni, B, Turano, P.
Deposit date:2004-12-14
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.03 Å)
Cite:Conformational variability of matrix metalloproteinases: Beyond a single 3D structure
Proc.Natl.Acad.Sci.Usa, 102, 2005
1S88
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BU of 1s88 by Molmil
NMR structure of a DNA duplex with two INA nucleotides inserted opposite each other, dCTCAACXCAAGCT:dAGCTTGXGTTGAG
Descriptor: 5'-D(*AP*GP*CP*TP*TP*GP*(2DM)P*GP*TP*TP*GP*AP*G)-3', 5'-D(*CP*TP*CP*AP*AP*CP*(2DM)P*CP*AP*AP*GP*CP*T)-3'
Authors:Nielsen, C.B, Petersen, M, Pedersen, E.B, Hansen, P.E, Christensen, U.B.
Deposit date:2004-01-31
Release date:2004-05-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure determination of a modified DNA oligonucleotide containing a new intercalating nucleic acid.
Bioconjug.Chem., 15, 2004
3Q2S
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BU of 3q2s by Molmil
Crystal Structure of CFIm68 RRM/CFIm25 complex
Descriptor: Cleavage and polyadenylation specificity factor subunit 5, Cleavage and polyadenylation specificity factor subunit 6
Authors:Yang, Q, Coseno, M, Gilmartin, G.M, Doublie, S.
Deposit date:2010-12-20
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal Structure of a Human Cleavage Factor CFI(m)25/CFI(m)68/RNA Complex Provides an Insight into Poly(A) Site Recognition and RNA Looping.
Structure, 19, 2011
3B7S
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BU of 3b7s by Molmil
[E296Q]LTA4H in complex with RSR substrate
Descriptor: ACETIC ACID, GLYCEROL, Leukotriene A-4 hydrolase, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.465 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
3B7U
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BU of 3b7u by Molmil
Leukotriene A4 Hydrolase Complexed with KELatorphan
Descriptor: ACETIC ACID, IMIDAZOLE, Leukotriene A-4 hydrolase, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
3B7R
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BU of 3b7r by Molmil
Leukotriene A4 Hydrolase Complexed with Inhibitor RB3040
Descriptor: IMIDAZOLE, Leukotriene A-4 hydrolase, N-[3-[(1-AMINOETHYL)(HYDROXY)PHOSPHORYL]-2-(1,1'-BIPHENYL-4-YLMETHYL)PROPANOYL]ALANINE, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.811 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
1Z3J
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BU of 1z3j by Molmil
Solution Structure of MMP12 in the presence of N-isobutyl-N-4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.M, Luchinat, C, Mangani, S, Terni, B, Turano, P.
Deposit date:2005-03-13
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational variability of matrix metalloproteinases: Beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1YUO
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BU of 1yuo by Molmil
Optimisation of the surface electrostatics as a strategy for cold adaptation of uracil-DNA N-glycosylase (UNG)from atlantic cod (Gadus morhua)
Descriptor: Uracil-DNA glycosylase
Authors:Moe, E, Leiros, I, Riise, E.K, Olufsen, M, Lanes, O, Smalas, A.O, Willassen, N.P.
Deposit date:2005-02-14
Release date:2005-03-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Optimisation of the surface electrostatics as a strategy for cold adaptation of uracil-DNA N-glycosylase (UNG) from Atlantic cod (Gadus morhua)
J.Mol.Biol., 343, 2004
3B7T
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BU of 3b7t by Molmil
[E296Q]LTA4H in complex with Arg-Ala-Arg substrate
Descriptor: IMIDAZOLE, Leukotriene A-4 hydrolase, RAR peptide, ...
Authors:Tholander, F, Haeggstrom, J, Thunnissen, M, Muroya, A, Roques, B.-P, Fournie-Zaluski, M.-C.
Deposit date:2007-10-31
Release date:2008-09-16
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure-based dissection of the active site chemistry of leukotriene a4 hydrolase: implications for m1 aminopeptidases and inhibitor design.
Chem.Biol., 15, 2008
4AXP
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BU of 4axp by Molmil
NMR structure of Hsp12, a protein induced by and required for dietary restriction-induced lifespan extension in yeast.
Descriptor: 12 KDA HEAT SHOCK PROTEIN
Authors:Herbert, A.P, Riesen, M, Bloxam, L, Kosmidou, E, Wareing, B.M, Johnson, J.R, Phelan, M.M, Pennington, S.R, Lian, L.Y, Morgan, A.
Deposit date:2012-06-13
Release date:2012-08-08
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR Structure of Hsp12, a Protein Induced by and Required for Dietary Restriction-Induced Lifespan Extension in Yeast.
Plos One, 7, 2012
1YCM
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BU of 1ycm by Molmil
Solution Structure of matrix metalloproteinase 12 (MMP12) in the presence of N-Isobutyl-N-[4-methoxyphenylsulfonyl]glycyl hydroxamic acid (NNGH)
Descriptor: CALCIUM ION, Macrophage metalloelastase, N-ISOBUTYL-N-[4-METHOXYPHENYLSULFONYL]GLYCYL HYDROXAMIC ACID, ...
Authors:Bertini, I, Calderone, V, Cosenza, M, Fragai, M, Lee, Y.M, Luchinat, C, Mangani, S, Terni, B, Turano, P, Structural Proteomics in Europe (SPINE)
Deposit date:2004-12-22
Release date:2005-04-19
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Conformational variability of matrix metalloproteinases: Beyond a single 3D structure.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4BAA
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BU of 4baa by Molmil
Redesign of a Phenylalanine Aminomutase into a beta-Phenylalanine Ammonia Lyase
Descriptor: PHENYLALANINE AMMONIA-LYASE
Authors:Bartsch, S, Wybenga, G.G, Jansen, M, Heberling, M.M, Wu, B, Dijkstra, B.W, Janssen, D.B.
Deposit date:2012-09-12
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Redesign of a Phenylalanine Aminomutase Into a Phenylalanine Ammonia Lyase
To be Published
2E50
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BU of 2e50 by Molmil
Crystal structure of SET/TAF-1beta/INHAT
Descriptor: Protein SET, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Muto, S, Senda, M, Senda, T, Horikoshi, M.
Deposit date:2006-12-18
Release date:2007-02-20
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Relationship between the structure of SET/TAF-Ibeta/INHAT and its histone chaperone activity
Proc.Natl.Acad.Sci.Usa, 104, 2007
4HWK
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BU of 4hwk by Molmil
Crystal structure of human sepiapterin reductase in complex with sulfapyridine
Descriptor: 4-amino-N-(pyridin-2-yl)benzenesulfonamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Groenlund Pedersen, M, Pojer, F, Johnsson, K.
Deposit date:2012-11-08
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Tetrahydrobiopterin biosynthesis as an off-target of sulfa drugs.
Science, 340, 2013
2P05
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BU of 2p05 by Molmil
Structural Insights into the Evolution of a Non-Biological Protein
Descriptor: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C.
Deposit date:2007-02-28
Release date:2007-06-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization.
PLoS ONE, 2, 2007
2GR2
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BU of 2gr2 by Molmil
Crystal structure of Ferredoxin reductase, BphA4 (oxidized form)
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, FLAVIN-ADENINE DINUCLEOTIDE, ferredoxin reductase
Authors:Senda, T, Senda, M.
Deposit date:2006-04-22
Release date:2007-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:A ferredoxin reductase BphA4 uses a butterfly motion of FAD to regulate affinity for ferredoxin
To be Published
2GQW
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BU of 2gqw by Molmil
Crystal structure of Ferredoxin reductase, BphA4 (oxidized form)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, GLYCEROL, ...
Authors:Senda, T, Senda, M.
Deposit date:2006-04-22
Release date:2007-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
2GR0
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BU of 2gr0 by Molmil
Crystal structure of Ferredoxin reductase, BphA4 (oxidized form, NAD+ complex)
Descriptor: ADENOSINE-5'-DIPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, ferredoxin reductase
Authors:Senda, T, Senda, M.
Deposit date:2006-04-22
Release date:2007-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular Mechanism of the Redox-dependent Interaction between NADH-dependent Ferredoxin Reductase and Rieske-type [2Fe-2S] Ferredoxin
J.Mol.Biol., 373, 2007
2GR3
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BU of 2gr3 by Molmil
Crystal structure of Ferredoxin reductase, BphA4 (oxidized form)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, FORMIC ACID, GLYCEROL, ...
Authors:Senda, T, Senda, M.
Deposit date:2006-04-22
Release date:2007-05-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A ferredoxin reductase BphA4 uses a butterfly motion of FAD to regulate affinity for ferredoxin
To be Published
2GR1
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BU of 2gr1 by Molmil
Crystal structure of Ferredoxin reductase, BphA4 (hydroquinone)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, ferredoxin reductase
Authors:Senda, T, Senda, M.
Deposit date:2006-04-22
Release date:2007-05-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A ferredoxin reductase BphA4 uses a butterfly motion of FAD to regulate affinity for ferredoxin
To be Published
2P09
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BU of 2p09 by Molmil
Structural Insights into the Evolution of a Non-Biological Protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, PENTAETHYLENE GLYCOL, ...
Authors:Smith, M, Rosenow, M, Wang, M, Allen, J.P, Szostak, J.W, Chaput, J.C.
Deposit date:2007-02-28
Release date:2007-06-05
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural insights into the evolution of a non-biological protein: importance of surface residues in protein fold optimization.
PLoS ONE, 2, 2007
4J7U
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BU of 4j7u by Molmil
Crystal structure of human sepiapterin reductase in complex with sulfathiazole
Descriptor: 4-amino-N-(1,3-thiazol-2-yl)benzenesulfonamide, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Groenlund Pedersen, M, Pojer, F, Johnsson, K.
Deposit date:2013-02-14
Release date:2013-06-05
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Tetrahydrobiopterin biosynthesis as an off-target of sulfa drugs.
Science, 340, 2013
1W86
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BU of 1w86 by Molmil
Solution structure of an dsDNA:LNA triplex
Descriptor: INTRAMOLECULAR DSDNA-LNA TRIPLEX
Authors:Sorensen, J.J, Nielsen, J.T, Petersen, M.
Deposit date:2004-09-16
Release date:2004-11-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a DsDNA:Lna Triplex
Nucleic Acids Res., 32, 2004
1EK4
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BU of 1ek4 by Molmil
BETA-KETOACYL [ACYL CARRIER PROTEIN] SYNTHASE I IN COMPLEX WITH DODECANOIC ACID TO 1.85 RESOLUTION
Descriptor: BETA-KETOACYL [ACYL CARRIER PROTEIN] SYNTHASE I, LAURIC ACID
Authors:Olsen, J.G, Kadziola, A, Siggaard-Andersen, M, von Wettstein-Knowles, P, Larsen, S.
Deposit date:2000-03-06
Release date:2001-04-11
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structures of beta-ketoacyl-acyl carrier protein synthase I complexed with fatty acids elucidate its catalytic machinery.
Structure, 9, 2001

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數據於2024-07-10公開中

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