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PDB: 133 results

1A4A
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BU of 1a4a by Molmil
AZURIN MUTANT WITH MET 121 REPLACED BY HIS, PH 6.5 CRYSTAL FORM, DATA COLLECTED AT 16 DEGREES CELSIUS
Descriptor: AZURIN, COPPER (II) ION
Authors:Messerschmidt, A, Prade, L.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.
Proc.Natl.Acad.Sci.USA, 95, 1998
1IDU
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BU of 1idu by Molmil
CRYSTAL STRUCTURE OF THE PEROXIDE FORM OF THE VANADIUM-CONTAINING CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Messerschmidt, A, Prade, L, Wever, R.
Deposit date:2001-04-05
Release date:2001-04-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Implications for the catalytic mechanism of the vanadium-containing enzyme chloroperoxidase from the fungus Curvularia inaequalis by X-ray structures of the native and peroxide form.
Biol.Chem., 378, 1997
1IDQ
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BU of 1idq by Molmil
CRYSTAL STRUCTURE OF NATIVE VANADIUM-CONTAINING CHLOROPEROXIDASE FROM CURVULARIA INAEQUALIS
Descriptor: VANADATE ION, VANADIUM CHLOROPEROXIDASE
Authors:Messerschmidt, A, Prade, L, Wever, R.
Deposit date:2001-04-05
Release date:2001-04-11
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Implications for the catalytic mechanism of the vanadium-containing enzyme chloroperoxidase from the fungus Curvularia inaequalis by X-ray structures of the native and peroxide form.
Biol.Chem., 378, 1997
3QDQ
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BU of 3qdq by Molmil
Complex between 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum and CoA
Descriptor: 4-Hydroxybutyrate CoA-transferase, COENZYME A
Authors:Messerschmidt, A, Macieira, S.
Deposit date:2011-01-19
Release date:2011-08-24
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the complex between 4-hydroxybutyrate CoA-transferase from Clostridium aminobutyricum and CoA.
Arch.Microbiol., 194, 2012
1A4B
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BU of 1a4b by Molmil
AZURIN MUTANT WITH MET 121 REPLACED BY HIS, PH 6.5 CRYSTAL FORM, DATA COLLECTED AT-180 DEGREES CELSIUS
Descriptor: AZURIN, COPPER (II) ION, SULFATE ION
Authors:Messerschmidt, A, Prade, L.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.
Proc.Natl.Acad.Sci.USA, 95, 1998
1A4C
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BU of 1a4c by Molmil
AZURIN MUTANT WITH MET 121 REPLACED BY HIS, PH 3.5 CRYSTAL FORM, DATA COLLECTED AT-180 DEGREES CELSIUS
Descriptor: AZURIN, COPPER (II) ION, NITRATE ION, ...
Authors:Messerschmidt, A, Prade, L.
Deposit date:1998-01-28
Release date:1998-04-29
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Rack-induced metal binding vs. flexibility: Met121His azurin crystal structures at different pH.
Proc.Natl.Acad.Sci.USA, 95, 1998
1VNC
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BU of 1vnc by Molmil
CHLOROPEROXIDASE FROM THE FUNGUS CURVULARIA INAEQUALIS
Descriptor: AZIDE ION, VANADATE ION, VANADIUM-CONTAINING CHLOROPEROXIDASE
Authors:Messerschmidt, A, Wever, R.
Deposit date:1995-09-01
Release date:1996-11-08
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:X-ray structure of a vanadium-containing enzyme: chloroperoxidase from the fungus Curvularia inaequalis.
Proc.Natl.Acad.Sci.USA, 93, 1996
5L6Q
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BU of 5l6q by Molmil
Refolded AL protein from cardiac amyloidosis
Descriptor: CARBONATE ION, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Annamalai, K, Liberta, F, Vielberg, M.-T, Lilie, H, Guehrs, K.-H, Schierhorn, A, Koehler, R, Schmidt, A, Haupt, C, Hegenbart, O, Schoenland, S, Groll, M, Faendrich, M.
Deposit date:2016-05-31
Release date:2017-05-31
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Common Fibril Structures Imply Systemically Conserved Protein Misfolding Pathways In Vivo.
Angew. Chem. Int. Ed. Engl., 56, 2017
2W4R
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BU of 2w4r by Molmil
Crystal structure of the regulatory domain of human LGP2
Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION
Authors:Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P.
Deposit date:2008-12-01
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA.
Nucleic Acids Res., 37, 2009
2B97
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BU of 2b97 by Molmil
Ultra-high resolution structure of hydrophobin HFBII
Descriptor: Hydrophobin II, MANGANESE (II) ION
Authors:Hakanpaa, J, Linder, M, Popov, A, Schmidt, A, Rouvinen, J.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.75 Å)
Cite:Hydrophobin HFBII in detail: ultrahigh-resolution structure at 0.75 A.
Acta Crystallogr.,Sect.D, 62, 2006
7PIU
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BU of 7piu by Molmil
Cryo-EM structure of the agonist setmelanotide bound to the active melanocortin-4 receptor (MC4R) in complex with the heterotrimeric Gs protein at 2.6 A resolution.
Descriptor: CALCIUM ION, Camelid antibody fragment - nanobody 35, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Heyder, N.A, Schmidt, A, Kleinau, G, Hilal, T, Scheerer, P.
Deposit date:2021-08-23
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (2.58 Å)
Cite:Structures of active melanocortin-4 receptor-Gs-protein complexes with NDP-alpha-MSH and setmelanotide.
Cell Res., 31, 2021
7PIV
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BU of 7piv by Molmil
Active Melanocortin-4 receptor (MC4R)- Gs protein complex bound to agonist NDP-alpha-MSH at 2.86 A resolution.
Descriptor: CALCIUM ION, Camelid antibody VHH fragment - nanobody 35, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, ...
Authors:Heyder, N.A, Schmidt, A, Kleinau, G, Hilal, T, Scheerer, P.
Deposit date:2021-08-23
Release date:2021-11-17
Method:ELECTRON MICROSCOPY (2.86 Å)
Cite:Structures of active melanocortin-4 receptor-Gs-protein complexes with NDP-alpha-MSH and setmelanotide.
Cell Res., 31, 2021
5AJ0
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BU of 5aj0 by Molmil
Cryo electron microscopy of actively translating human polysomes (POST state).
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S10, ...
Authors:Behrmann, E, Loerke, J, Budkevich, T.V, Yamamoto, K, Schmidt, A, Penczek, P.A, Vos, M.R, Burger, J, Mielke, T, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-02-19
Release date:2015-05-20
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural Snapshots of Actively Translating Human Ribosomes
Cell(Cambridge,Mass.), 161, 2015
5D51
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BU of 5d51 by Molmil
Krypton derivatization of an O2-tolerant membrane-bound [NiFe] hydrogenase reveals a hydrophobic gas tunnel network
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, FE4-S3 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Frielingsdorf, S, van der Linden, P, von Stetten, D, Lenz, O, Carpentier, P, Scheerer, P.
Deposit date:2015-08-10
Release date:2016-03-23
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Krypton Derivatization of an O2 -Tolerant Membrane-Bound [NiFe] Hydrogenase Reveals a Hydrophobic Tunnel Network for Gas Transport.
Angew.Chem.Int.Ed.Engl., 55, 2016
2L7U
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BU of 2l7u by Molmil
Structure of CEL-PEP-RAGE V domain complex
Descriptor: Advanced glycosylation end product-specific receptor, Serum albumin peptide
Authors:Xue, J, Rai, V, Schmidt, A, Frolov, S, Reverdatto, S, Singer, D, Chabierski, S, Xie, J, Burz, D, Shekhtman, A, Hoffman, R.
Deposit date:2010-12-23
Release date:2011-05-18
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:Advanced glycation end product recognition by the receptor for AGEs.
Structure, 19, 2011
2LMB
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BU of 2lmb by Molmil
Solution Structure of C-terminal RAGE (ctRAGE)
Descriptor: Advanced glycosylation end product-specific receptor
Authors:Rai, V, Maldonado, A.Y, Burz, D.S, Reverdatto, S, Schmidt, A, Shekhtman, A.
Deposit date:2011-11-29
Release date:2011-12-21
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Signal transduction in receptor for advanced glycation end products (RAGE): solution structure of C-terminal rage (ctRAGE) and its binding to mDia1.
J.Biol.Chem., 287, 2012
5FLX
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BU of 5flx by Molmil
Mammalian 40S HCV-IRES complex
Descriptor: 18S RRNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ...
Authors:Yamamoto, H, Collier, M, Loerke, J, Ismer, J, Schmidt, A, Hilal, T, Sprink, T, Yamamoto, K, Mielke, T, Burger, J, Shaikh, T.R, Dabrowski, M, Hildebrand, P.W, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-10-28
Release date:2015-12-23
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Embo J., 34, 2015
6GYH
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BU of 6gyh by Molmil
Crystal structure of the light-driven proton pump Coccomyxa subellipsoidea Rhodopsin CsR
Descriptor: (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, CHOLESTEROL, Family A G protein-coupled receptor-like protein, ...
Authors:Szczepek, M, Schmidt, A, Scheerer, P.
Deposit date:2018-06-29
Release date:2019-03-27
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:Design of a light-gated proton channel based on the crystal structure ofCoccomyxarhodopsin.
Sci.Signal., 12, 2019
5MDL
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BU of 5mdl by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its O2-derivatized form by a "soak-and-freeze" derivatization method
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
5T4X
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BU of 5t4x by Molmil
CRYSTAL STRUCTURE OF PDE6D IN APO-STATE
Descriptor: Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta
Authors:Qureshi, B.M, Schmidt, A, Scheerer, P.
Deposit date:2016-08-30
Release date:2018-01-10
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Mechanistic insights into the role of prenyl-binding protein PrBP/ delta in membrane dissociation of phosphodiesterase 6.
Nat Commun, 9, 2018
8POW
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BU of 8pow by Molmil
Crystal Structure of the C19G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the air-oxidized state at 1.61 A Resolution.
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, Fe4S4, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2023-07-05
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
8POX
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BU of 8pox by Molmil
Crystal Structure of the C19G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the H2-reduced state at 1.6 A Resolution.
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, Fe4S4, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2023-07-05
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
6G1Z
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BU of 6g1z by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its Pfr state.
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
Authors:Sauthof, L, Schmidt, A, Szczepek, M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
8AZW
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BU of 8azw by Molmil
Cryo-EM structure of the plant 60S subunit
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-09-06
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023
8AUV
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BU of 8auv by Molmil
Cryo-EM structure of the plant 40S subunit
Descriptor: 18S rRNA, MAGNESIUM ION, POTASSIUM ION, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-08-25
Release date:2023-06-07
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.38 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023

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