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PDB: 100 results

3F6U
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Crystal structure of human Activated Protein C (APC) complexed with PPACK
Descriptor: CALCIUM ION, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, SODIUM ION, ...
Authors:Schmidt, A.E, Padmanabhan, K, Underwood, M.C, Bode, W, Mather, T, Bajaj, S.P.
Deposit date:2008-11-06
Release date:2008-11-25
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Thermodynamic linkage between the S1 site, the Na+ site, and the Ca2+ site in the protease domain of human activated protein C (APC).
J.Biol.Chem., 277, 2002
6G20
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Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its functional Meta-F intermediate state.
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
Authors:Schmidt, A, Sauthof, L, Szczepek, M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
1BG4
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BU of 1bg4 by Molmil
XYLANASE FROM PENICILLIUM SIMPLICISSIMUM
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ENDO-1,4-BETA-XYLANASE, GLYCEROL, ...
Authors:Schmidt, A, Kratky, C.
Deposit date:1998-06-05
Release date:1998-08-12
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structure of the xylanase from Penicillium simplicissimum.
Protein Sci., 7, 1998
3NIR
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BU of 3nir by Molmil
Crystal structure of small protein crambin at 0.48 A resolution
Descriptor: Crambin, ETHANOL
Authors:Schmidt, A, Teeter, M, Weckert, E, Lamzin, V.S.
Deposit date:2010-06-16
Release date:2011-05-18
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (0.48 Å)
Cite:Crystal structure of small protein crambin at 0.48 A resolution
Acta Crystallogr.,Sect.F, 67, 2011
4YJZ
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BU of 4yjz by Molmil
Human antibody H2526 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, scFv H2526
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2015-03-03
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Viral receptor-binding site antibodies with diverse germline origins.
Cell, 161, 2015
4YK4
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BU of 4yk4 by Molmil
Human antibody 641 I-9 in complex with influenza hemagglutinin H1 Solomon Islands/03/2006
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 641 I-9 VHCH antibody, 641 I-9 VLCL antibody, ...
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2015-03-03
Release date:2015-05-27
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Viral receptor-binding site antibodies with diverse germline origins.
Cell, 161, 2015
6G1Y
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BU of 6g1y by Molmil
Crystal structure of the photosensory core module (PCM) of a bathy phytochrome from Agrobacterium fabrum in the Pfr state.
Descriptor: 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, Bacteriophytochrome protein
Authors:Schmidt, A, Qureshi, B.M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
1PQ8
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Trypsin at pH 4 at atomic resolution
Descriptor: CITRIC ACID, GLY-GLY-ARG PEPTIDE, LYSINE, ...
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1PQ7
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BU of 1pq7 by Molmil
Trypsin at 0.8 A, pH5 / borax
Descriptor: ARGININE, SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.8 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1PQ5
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BU of 1pq5 by Molmil
Trypsin at pH 5, 0.85 A
Descriptor: ARGININE, SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1XVO
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BU of 1xvo by Molmil
Trypsin from Fusarium oxysporum at pH 6
Descriptor: SULFATE ION, trypsin
Authors:Schmidt, A, Lamzin, V.S.
Deposit date:2004-10-28
Release date:2005-07-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (0.84 Å)
Cite:Extraction of functional motion in trypsin crystal structures.
Acta Crystallogr.,Sect.D, 61, 2005
1PQA
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BU of 1pqa by Molmil
Trypsin with PMSF at atomic resolution
Descriptor: SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-18
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1PPZ
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BU of 1ppz by Molmil
Trypsin complexes at atomic and ultra-high resolution
Descriptor: SULFATE ION, Trypsin
Authors:Schmidt, A, Jelsch, C, Rypniewski, W, Lamzin, V.S.
Deposit date:2003-06-17
Release date:2003-11-11
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Trypsin Revisited: CRYSTALLOGRAPHY AT (SUB) ATOMIC RESOLUTION AND QUANTUM CHEMISTRY REVEALING DETAILS OF CATALYSIS.
J.Biol.Chem., 278, 2003
1ZR0
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BU of 1zr0 by Molmil
Crystal Structure of Kunitz Domain 1 of Tissue Factor Pathway Inhibitor-2 with Bovine Trypsin
Descriptor: CALCIUM ION, Cationic trypsin, Tissue factor pathway inhibitor 2
Authors:Schmidt, A.E, Chand, H.S, Cascio, D, Kisiel, W, Bajaj, S.P.
Deposit date:2005-05-18
Release date:2005-06-07
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.802 Å)
Cite:Crystal structure of Kunitz domain 1 (KD1) of tissue factor pathway inhibitor-2 in complex with trypsin. Implications for KD1 specificity of inhibition
J.Biol.Chem., 280, 2005
4HKB
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BU of 4hkb by Molmil
CH67 Fab (unbound) from the CH65-67 Lineage
Descriptor: CH67 heavy chain, CH67 light chain
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2012-10-15
Release date:2012-11-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HK3
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BU of 4hk3 by Molmil
I2 Fab (unbound) from CH65-CH67 Lineage
Descriptor: I2 heavy chain, I2 light chain
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2012-10-14
Release date:2012-11-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HKX
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BU of 4hkx by Molmil
Influenza hemagglutinin in complex with CH67 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CH67 heavy chain, CH67 light chain, ...
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2012-10-15
Release date:2012-11-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody.
Proc.Natl.Acad.Sci.USA, 110, 2013
4HK0
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BU of 4hk0 by Molmil
UCA Fab (unbound) from CH65-CH67 Lineage
Descriptor: UCA heavy chain, UCA light chain
Authors:Schmidt, A.G, Harrison, S.C.
Deposit date:2012-10-14
Release date:2012-11-21
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Preconfiguration of the antigen-binding site during affinity maturation of a broadly neutralizing influenza virus antibody.
Proc.Natl.Acad.Sci.USA, 110, 2013
7ODH
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BU of 7odh by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its as-isolated state
Descriptor: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2021-04-29
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021
7ODG
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BU of 7odg by Molmil
Crystal structure of the O2-tolerant MBH-P242C from Ralstonia eutropha in its reduced state
Descriptor: CHLORIDE ION, FE4-S3 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Schmidt, A, Kalms, J, Scheerer, P.
Deposit date:2021-04-29
Release date:2021-07-07
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Resonance Raman spectroscopic analysis of the iron-sulfur cluster redox chain of the Ralstonia eutropha membrane-bound [NiFe]-hydrogenase
J Raman Spectrosc, 2021
1XVM
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BU of 1xvm by Molmil
Trypsin from Fusarium oxysporum- room temperature to atomic resolution
Descriptor: Trypsin, substrate tripeptide GLY-ALA-ARG
Authors:Schmidt, A, Lamzin, V.S.
Deposit date:2004-10-28
Release date:2005-07-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Extraction of functional motion in trypsin crystal structures.
Acta Crystallogr.,Sect.D, 61, 2005
4HTW
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BU of 4htw by Molmil
SIVmac239 capsid N-terminal domain
Descriptor: Gag protein
Authors:Schmidt, A.G.
Deposit date:2012-11-02
Release date:2013-05-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Gain-of-Sensitivity Mutations in a Trim5-Resistant Primary Isolate of Pathogenic SIV Identify Two Independent Conserved Determinants of Trim5alpha Specificity.
Plos Pathog., 9, 2013
2I9E
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BU of 2i9e by Molmil
Structure of Triosephosphate Isomerase of Tenebrio molitor
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Triosephosphate isomerase
Authors:Schmidt, A, Scheerer, P, Wessner, H, Hoehne, W, Krauss, N.
Deposit date:2006-09-05
Release date:2006-09-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A coleopteran triosephosphate isomerase: X-ray structure and phylogenetic impact of insect sequences.
Insect Mol Biol, 19, 2010
8G5A
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BU of 8g5a by Molmil
X-31 hemagglutinin in complex with FL-1061 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FL-1086 Fab heavy chain, FL-1086 light chain, ...
Authors:Windsor, I.W, Thornlow, D, Schmidt, A.G.
Deposit date:2023-02-12
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Antibodies elicited by a hyperglycoslated immunogen
To Be Published
8G5B
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BU of 8g5b by Molmil
Influenza A H3N2 X-31 Hemagglutinin in complex with FL-1061
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, FL-1061 heavy chain, FL-1061 light chain, ...
Authors:Windsor, I.W, Thornlow, D, Schmidt, A.G.
Deposit date:2023-02-12
Release date:2024-02-21
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Fabs elicited by hyperglycosylated immunogen
To Be Published

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