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PDB: 179 results

6G1Z
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BU of 6g1z by Molmil
Crystal structure of a fluorescence optimized bathy phytochrome PAiRFP2 derived from wild-type Agp2 in its Pfr state.
Descriptor: 2-(2-METHOXYETHOXY)ETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, 3-[(2Z)-2-({3-(2-carboxyethyl)-5-[(E)-(4-ethenyl-3-methyl-5-oxo-1,5-dihydro-2H-pyrrol-2-ylidene)methyl]-4-methyl-1H-pyrrol-2-yl}methylidene)-5-{(Z)-[(3E,4S)-3-ethylidene-4-methyl-5-oxopyrrolidin-2-ylidene]methyl}-4-methyl-2H-pyrrol-3-yl]propanoic acid, ...
Authors:Sauthof, L, Schmidt, A, Szczepek, M, Scheerer, P.
Deposit date:2018-03-22
Release date:2018-11-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Structural snapshot of a bacterial phytochrome in its functional intermediate state.
Nat Commun, 9, 2018
4IUC
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BU of 4iuc by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its as-isolated form - oxidized state 2
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, IRON/SULFUR CLUSTER, ...
Authors:Frielingsdorf, S, Schmidt, A, Fritsch, J, Lenz, O, Scheerer, P.
Deposit date:2013-01-20
Release date:2014-04-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Nat.Chem.Biol., 10, 2014
7UMM
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BU of 7umm by Molmil
H1 Solomon Islands 2006 hemagglutinin in complex with Ab109
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin, ...
Authors:Windsor, I.W, Caradonna, T.M, Schmidt, A.G.
Deposit date:2022-04-07
Release date:2022-11-23
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:An epitope-enriched immunogen expands responses to a conserved viral site.
Cell Rep, 41, 2022
8POW
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BU of 8pow by Molmil
Crystal Structure of the C19G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the air-oxidized state at 1.61 A Resolution.
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, Fe4S4, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2023-07-05
Release date:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
8POX
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BU of 8pox by Molmil
Crystal Structure of the C19G variant of the membrane-bound [NiFe]-Hydrogenase from Cupriavidus necator in the H2-reduced state at 1.6 A Resolution.
Descriptor: CHLORIDE ION, FE3-S4 CLUSTER, Fe4S4, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2023-07-05
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Stepwise conversion of the Cys 6 [4Fe-3S] to a Cys 4 [4Fe-4S] cluster and its impact on the oxygen tolerance of [NiFe]-hydrogenase.
Chem Sci, 14, 2023
5MDL
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BU of 5mdl by Molmil
Crystal structure of an O2-tolerant [NiFe]-hydrogenase from Ralstonia eutropha in its O2-derivatized form by a "soak-and-freeze" derivatization method
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, FE3-S4 CLUSTER, ...
Authors:Kalms, J, Schmidt, A, Scheerer, P.
Deposit date:2016-11-11
Release date:2018-02-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Tracking the route of molecular oxygen in O2-tolerant membrane-bound [NiFe] hydrogenase.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2FIR
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BU of 2fir by Molmil
Crystal structure of DFPR-VIIa/sTF
Descriptor: CALCIUM ION, CHLORIDE ION, Coagulation factor VII Heavy Chain (EC 3.4.21.21), ...
Authors:Bajaj, S.P, Schmidt, A.E, Padmanabhan, K, Bajaj, M.S, Prevost, D, Schreuder, H.
Deposit date:2005-12-30
Release date:2006-07-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:High Resolution Structures of p-Aminobenzamidine- and Benzamidine-VIIa/Soluble Tissue Factor: Unpredicted conformation of the 192-193 peptide bond and mapping of Ca2+, Mg2+, Na+ and Zn2+ sites in factor VIIa
J.Biol.Chem., 281, 2006
7JIX
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BU of 7jix by Molmil
Murine antibody that engages the influenza hemagglutinin receptor binding site
Descriptor: Fab heavy chain, Fab light chain, Hemagglutinin HA1 chain, ...
Authors:Bajic, G, Schmidt, A.G.
Deposit date:2020-07-23
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.901 Å)
Cite:Murine antibody that engages the influenza hemagglutinin receptor binding site
To Be Published
2W4R
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BU of 2w4r by Molmil
Crystal structure of the regulatory domain of human LGP2
Descriptor: MERCURY (II) ION, PROBABLE ATP-DEPENDENT RNA HELICASE DHX58, SULFATE ION
Authors:Pippig, D.A, Hellmuth, J.C, Cui, S, Kirchhofer, A, Lammens, K, Lammens, A, Schmidt, A, Rothenfusser, S, Hopfner, K.P.
Deposit date:2008-12-01
Release date:2009-02-24
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The Regulatory Domain of the Rig-I Family ATPase Lgp2 Senses Double-Stranded RNA.
Nucleic Acids Res., 37, 2009
1I41
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BU of 1i41 by Molmil
CYSTATHIONINE GAMMA-SYNTHASE IN COMPLEX WITH THE INHIBITOR APPA
Descriptor: 2-[(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHYL)-IMINO]-5-PHOSPHONO-PENT-3-ENOIC ACID, CYSTATHIONINE GAMMA-SYNTHASE
Authors:Steegborn, C, Laber, B, Messerschmidt, A, Huber, R, Clausen, T.
Deposit date:2001-02-19
Release date:2001-09-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structures of cystathionine gamma-synthase inhibitor complexes rationalize the increased affinity of a novel inhibitor.
J.Mol.Biol., 311, 2001
2B97
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BU of 2b97 by Molmil
Ultra-high resolution structure of hydrophobin HFBII
Descriptor: Hydrophobin II, MANGANESE (II) ION
Authors:Hakanpaa, J, Linder, M, Popov, A, Schmidt, A, Rouvinen, J.
Deposit date:2005-10-11
Release date:2006-03-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (0.75 Å)
Cite:Hydrophobin HFBII in detail: ultrahigh-resolution structure at 0.75 A.
Acta Crystallogr.,Sect.D, 62, 2006
1QGN
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BU of 1qgn by Molmil
CYSTATHIONINE GAMMA-SYNTHASE FROM NICOTIANA TABACUM
Descriptor: PROTEIN (CYSTATHIONINE GAMMA-SYNTHASE), PYRIDOXAL-5'-PHOSPHATE
Authors:Steegborn, C, Messerschmidt, A, Laber, B, Streber, W, Huber, R, Clausen, T.
Deposit date:1999-05-02
Release date:1999-08-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The crystal structure of cystathionine gamma-synthase from Nicotiana tabacum reveals its substrate and reaction specificity.
J.Mol.Biol., 290, 1999
1IBJ
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BU of 1ibj by Molmil
Crystal structure of cystathionine beta-lyase from Arabidopsis thaliana
Descriptor: CARBONATE ION, CYSTATHIONINE BETA-LYASE, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Breitinger, U, Clausen, T, Messerschmidt, A.
Deposit date:2001-03-28
Release date:2001-04-04
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The three-dimensional structure of cystathionine beta-lyase from Arabidopsis and its substrate specificity
Plant Physiol., 126, 2001
1J93
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BU of 1j93 by Molmil
Crystal Structure and Substrate Binding Modeling of the Uroporphyrinogen-III Decarboxylase from Nicotiana tabacum: Implications for the Catalytic Mechanism
Descriptor: SULFATE ION, UROPORPHYRINOGEN DECARBOXYLASE
Authors:Martins, B.M, Grimm, B, Mock, H.-P, Huber, R, Messerschmidt, A.
Deposit date:2001-05-23
Release date:2001-10-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure and substrate binding modeling of the uroporphyrinogen-III decarboxylase from Nicotiana tabacum. Implications for the catalytic mechanism
J.Biol.Chem., 276, 2001
1JVO
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BU of 1jvo by Molmil
Azurin dimer, crosslinked via disulfide bridge
Descriptor: Azurin, COPPER (II) ION
Authors:van Amsterdam, I.M.C, Ubbink, M, Einsle, O, Messerschmidt, A, Merli, A, Cavazzini, D, Rossi, G.L, Canters, G.W.
Deposit date:2001-08-30
Release date:2002-01-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Dramatic modulation of electron transfer in protein complexes by crosslinking
Nat.Struct.Biol., 9, 2002
1I48
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BU of 1i48 by Molmil
CYSTATHIONINE GAMMA-SYNTHASE IN COMPLEX WITH THE INHIBITOR CTCPO
Descriptor: CARBOXYMETHYLTHIO-3-(3-CHLOROPHENYL)-1,2,4-OXADIAZOL, CYSTATHIONINE GAMMA-SYNTHASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Steegborn, C, Laber, B, Messerschmidt, A, Huber, R, Clausen, T.
Deposit date:2001-02-20
Release date:2001-09-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Crystal structures of cystathionine gamma-synthase inhibitor complexes rationalize the increased affinity of a novel inhibitor.
J.Mol.Biol., 311, 2001
5FLX
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BU of 5flx by Molmil
Mammalian 40S HCV-IRES complex
Descriptor: 18S RRNA, 40S RIBOSOMAL PROTEIN S10, 40S RIBOSOMAL PROTEIN S11, ...
Authors:Yamamoto, H, Collier, M, Loerke, J, Ismer, J, Schmidt, A, Hilal, T, Sprink, T, Yamamoto, K, Mielke, T, Burger, J, Shaikh, T.R, Dabrowski, M, Hildebrand, P.W, Scheerer, P, Spahn, C.M.T.
Deposit date:2015-10-28
Release date:2015-12-23
Last modified:2017-08-30
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Molecular Architecture of the Ribosome-Bound Hepatitis C Virus Internal Ribosomal Entry Site RNA.
Embo J., 34, 2015
1ILU
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BU of 1ilu by Molmil
X-RAY CRYSTAL STRUCTURE THE TWO SITE-SPECIFIC MUTANTS ILE7SER AND PHE110SER OF AZURIN FROM PSEUDOMONAS AERUGINOSA
Descriptor: AZURIN, COPPER (II) ION
Authors:Hammann, C, Nar, H, Huber, R, Messerschmidt, A.
Deposit date:1995-10-12
Release date:1996-03-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:X-ray crystal structure of the two site-specific mutants Ile7Ser and Phe110Ser of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 255, 1996
2E7Z
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BU of 2e7z by Molmil
Acetylene Hydratase from Pelobacter acetylenicus
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE, ACETATE ION, ...
Authors:Einsle, O, Kroneck, P.M.H, Seiffert, G.B, Messerschmidt, A.
Deposit date:2007-01-15
Release date:2007-02-27
Last modified:2019-09-04
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Structure of the non-redox-active tungsten/[4Fe:4S] enzyme acetylene hydratase
Proc.Natl.Acad.Sci.Usa, 104, 2007
1I77
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BU of 1i77 by Molmil
CYTOCHROME C3 FROM DESULFOVIBRIO DESULFURICANS ESSEX 6
Descriptor: CYTOCHROME C3, PROTOPORPHYRIN IX CONTAINING FE
Authors:Einsle, O, Foerster, S, Mann, K.H, Fritz, G, Messerschmidt, A, Kroneck, P.M.H.
Deposit date:2001-03-08
Release date:2001-08-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Spectroscopic investigation and determination of reactivity and structure of the tetraheme cytochrome c3 from Desulfovibrio desulfuricans Essex 6.
Eur.J.Biochem., 268, 2001
1I43
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BU of 1i43 by Molmil
CYSTATHIONINE GAMMA-SYNTHASE IN COMPLEX WITH THE INHIBITOR PPCA
Descriptor: 3-(PHOSPHONOMETHYL)PYRIDINE-2-CARBOXYLIC ACID, CYSTATHIONINE GAMMA-SYNTHASE, PYRIDOXAL-5'-PHOSPHATE
Authors:Steegborn, C, Laber, B, Messerschmidt, A, Huber, R, Clausen, T.
Deposit date:2001-02-19
Release date:2001-09-05
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Crystal structures of cystathionine gamma-synthase inhibitor complexes rationalize the increased affinity of a novel inhibitor.
J.Mol.Biol., 311, 2001
2AZU
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BU of 2azu by Molmil
X-RAY CRYSTAL STRUCTURE OF THE TWO SITE-SPECIFIC MUTANTS HIS35*GLN AND HIS35*LEU OF AZURIN FROM PSEUDOMONAS AERUGINOSA
Descriptor: AZURIN, COPPER (II) ION, NITRATE ION
Authors:Nar, H, Messerschmidt, A, Huber, R.
Deposit date:1991-01-11
Release date:1993-07-15
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:X-ray crystal structure of the two site-specific mutants His35Gln and His35Leu of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 218, 1991
1KL7
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BU of 1kl7 by Molmil
Crystal Structure of Threonine Synthase from Yeast
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Threonine Synthase
Authors:Garrido-Franco, M, Ehlert, S, Messerschmidt, A, Marinkovic, S, Huber, R, Laber, B, Bourenkov, G.P, Clausen, T.
Deposit date:2001-12-11
Release date:2002-04-24
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function of threonine synthase from yeast.
J.Biol.Chem., 277, 2002
8AZW
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BU of 8azw by Molmil
Cryo-EM structure of the plant 60S subunit
Descriptor: 25S rRNA, 5.8S rRNA, 5S rRNA, ...
Authors:Smirnova, J, Loerke, J, Kleinau, G, Schmidt, A, Buerger, J, Meyer, E.H, Mielke, T, Scheerer, P, Bock, R, Spahn, C.M.T, Zoschke, R.
Deposit date:2022-09-06
Release date:2023-06-07
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.14 Å)
Cite:Structure of the actively translating plant 80S ribosome at 2.2 angstrom resolution.
Nat.Plants, 9, 2023
1ILS
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BU of 1ils by Molmil
X-RAY CRYSTAL STRUCTURE THE TWO SITE-SPECIFIC MUTANTS ILE7SER AND PHE110SER OF AZURIN FROM PSEUDOMONAS AERUGINOSA
Descriptor: AZURIN, COPPER (II) ION, NITRATE ION
Authors:Hammann, C, Nar, H, Huber, R, Messerschmidt, A.
Deposit date:1995-10-12
Release date:1996-03-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:X-ray crystal structure of the two site-specific mutants Ile7Ser and Phe110Ser of azurin from Pseudomonas aeruginosa.
J.Mol.Biol., 255, 1996

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