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PDB: 85 results

8DMH
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Lymphocytic choriomeningitis virus glycoprotein in complex with neutralizing antibody M28
Descriptor: 18.5C-M28 Fab Heavy Chain, 18.5C-M28 Fab Light Chain, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.19 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
8DMI
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Lymphocytic choriomeningitis virus glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein G1, ...
Authors:Moon-Walker, A, Hastie, K.M, Zyla, D.S, Saphire, E.O.
Deposit date:2022-07-08
Release date:2023-04-12
Last modified:2023-05-03
Method:ELECTRON MICROSCOPY (3.26 Å)
Cite:Structural basis for antibody-mediated neutralization of lymphocytic choriomeningitis virus.
Cell Chem Biol, 30, 2023
7U9G
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Rabies virus glycoprotein pre-fusion trimer in complex with neutralizing antibody RVA122
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein, RVA122 Fab Heavy Chain, ...
Authors:Callaway, H.M, Zyla, D, Larrous, F, Dias de Melo, G, Hastie, K.M, Avalos, R.D, Agarwal, A, Bouhry, H, Corti, D, Saphire, E.O.
Deposit date:2022-03-10
Release date:2022-07-20
Method:ELECTRON MICROSCOPY (3.39 Å)
Cite:Structure of the rabies virus glycoprotein trimer bound to a prefusion-specific neutralizing antibody.
Sci Adv, 8, 2022
8DPM
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BU of 8dpm by Molmil
Structure of EBOV GP lacking the mucin-like domain with 9.20.1A2 Fab and 6D6 scFv bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 6D6 scFv, Antibody 9.20.1A2 Fab heavy chain, ...
Authors:Yu, X, Saphire, E.O.
Deposit date:2022-07-15
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (3 Å)
Cite:The evolution and determinants of neutralization of potent head-binding antibodies against Ebola virus.
Cell Rep, 42, 2023
8DPL
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Structure of EBOV GP lacking the mucin-like domain with 2.1.1D5 scFv and 6D6 scFv bound
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2.1.1D5 heavy chain variable domain, 2.1.1D5 light chain variable domain, ...
Authors:Yu, X, Saphire, E.O.
Deposit date:2022-07-15
Release date:2023-07-19
Last modified:2023-11-22
Method:ELECTRON MICROSCOPY (2.53 Å)
Cite:The evolution and determinants of neutralization of potent head-binding antibodies against Ebola virus.
Cell Rep, 42, 2023
7UOV
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Native Lassa glycoprotein in complex with neutralizing antibodies 12.1F and 37.2D
Descriptor: 12.1F heavy chain (variable domain), 12.1F light chain (variable domain), 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Li, H, Saphire, E.O.
Deposit date:2022-04-14
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (2.75 Å)
Cite:A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus.
Sci Transl Med, 14, 2022
7UOT
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Native Lassa glycoprotein in complex with neutralizing antibodies 8.9F and 37.2D
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, 37.2D heavy chain (variable domain), ...
Authors:Li, H, Saphire, E.O.
Deposit date:2022-04-13
Release date:2022-11-02
Method:ELECTRON MICROSCOPY (2.77 Å)
Cite:A cocktail of protective antibodies subverts the dense glycan shield of Lassa virus.
Sci Transl Med, 14, 2022
8F0G
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Structure of SARS-CoV-2 Omicron BA.1 spike in complex with antibody Fab 1C3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody 1C3 Fab Heavy Chain, ...
Authors:Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O.
Deposit date:2022-11-02
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023
8F0H
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Structure of SARS-CoV-2 spike with antibody Fabs 2A10 and 1H2 (Local refinement of the RBD and Fabs 1H2 and 2A10)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Antibody Fab 1H2 heavy chain, Antibody Fab 1H2 light chain, ...
Authors:Yu, X, Zyla, D, Hastie, K.M, Saphire, E.O.
Deposit date:2022-11-02
Release date:2023-05-03
Method:ELECTRON MICROSCOPY (3.18 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023
8E1G
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BU of 8e1g by Molmil
SARS-CoV-2 RBD in complex with Omicron-neutralizing antibody 2A10
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2A10 Fab, heavy chain, ...
Authors:Wasserman, H, Hastie, K.M, Buck, T.K, Saphire, E.O.
Deposit date:2022-08-10
Release date:2023-06-28
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.57 Å)
Cite:Potent Omicron-neutralizing antibodies isolated from a patient vaccinated 6 months before Omicron emergence.
Cell Rep, 42, 2023
7K5L
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BU of 7k5l by Molmil
Ebola virus VP40 octameric ring generated by an RNA oligonucleotide
Descriptor: HSP RNA oligonucleotide, Matrix protein VP40
Authors:Landeras-Bueno, S, Wasserman, H, Salie, Z.L, Saphire, E.O.
Deposit date:2020-09-17
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form.
Cell Rep, 35, 2021
7K5D
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BU of 7k5d by Molmil
Ebola virus VP40 octameric ring generated by a DNA oligonucleotide
Descriptor: HSP DNA oligonucleotide, Matrix protein VP40
Authors:Landeras-Bueno, S, Wasserman, H, Salie, Z.L, Saphire, E.O.
Deposit date:2020-09-16
Release date:2021-04-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Cellular mRNA triggers structural transformation of Ebola virus matrix protein VP40 to its essential regulatory form.
Cell Rep, 35, 2021
5TOI
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BU of 5toi by Molmil
Crystal Structure of the Marburg Virus VP35 Oligomerization Domain P4222
Descriptor: Polymerase cofactor VP35
Authors:Bruhn, J.F, Tickle, I.J, Bricogne, G, Saphire, E.O.
Deposit date:2016-10-17
Release date:2016-11-09
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:Crystal Structure of the Marburg Virus VP35 Oligomerization Domain.
J. Virol., 91, 2017
5UQY
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BU of 5uqy by Molmil
Crystal structure of Marburg virus GP in complex with the human survivor antibody MR78
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ENVELOPE GLYCOPROTEIN GP1, ...
Authors:Hashiguchi, T, Fusco, M.L, Hastie, K.M, Bomholdt, Z.A, Lee, J.E, Flyak, A.I, Matsuoka, R, Kohda, D, Yanagi, Y, Hammel, M, Crowe, J.E, Saphire, E.O.
Deposit date:2017-02-08
Release date:2017-03-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:Structural basis for Marburg virus neutralization by a cross-reactive human antibody.
Cell, 160, 2015
5T3T
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BU of 5t3t by Molmil
Ebola virus VP30 CTD bound to nucleoprotein
Descriptor: Fusion protein of Nucleoprotein and Minor nucleoprotein VP30, SULFATE ION
Authors:Kirchdoerfer, R.N, Moyer, C.L, Abelson, D.M, Saphire, E.O.
Deposit date:2016-08-26
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis.
Plos Pathog., 12, 2016
5TOH
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BU of 5toh by Molmil
Crystal Structure of the Marburg Virus VP35 Oligomerization Domain I2
Descriptor: Polymerase cofactor VP35
Authors:Bruhn, J.F, Kirchdoerfer, R.N, Tickle, I.J, Bricogne, G, Saphire, E.O.
Deposit date:2016-10-17
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Crystal Structure of the Marburg Virus VP35 Oligomerization Domain.
J. Virol., 91, 2017
5VK2
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BU of 5vk2 by Molmil
Structural basis for antibody-mediated neutralization of Lassa virus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hastie, K.M, Zandonatti, M.A, Kleinfelter, L.M, Rowland, M.L, Rowland, M.M, Chandra, K, Branco, L.M, Robinson, J.E, Garry, R.F, Saphire, E.O.
Deposit date:2017-04-20
Release date:2017-05-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.201 Å)
Cite:Structural basis for antibody-mediated neutralization of Lassa virus.
Science, 356, 2017
5T3W
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BU of 5t3w by Molmil
Marburg virus VP30 bound to nucleoprotein
Descriptor: Fusion protein of Nucleoprotein and Minor nucleoprotein VP30
Authors:Kirchdoerfer, R.K, Moyer, C.L, Abelson, D.M, Saphire, E.O.
Deposit date:2016-08-26
Release date:2016-09-28
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The Ebola Virus VP30-NP Interaction Is a Regulator of Viral RNA Synthesis.
Plos Pathog., 12, 2016
8UT2
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BU of 8ut2 by Molmil
Pre-fusion Measles virus fusion protein complexed with Fab 77
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-10-30
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.56 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
9AT8
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BU of 9at8 by Molmil
Fab 77-stabilized MeV F ectodomain fragment
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, mAB 77 heavy chain, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2024-02-26
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UTF
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BU of 8utf by Molmil
Structure of the Measles virus Fusion protein in the post-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-10-31
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.73 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UUP
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BU of 8uup by Molmil
Structure of the Measles virus Fusion protein in the pre-fusion conformation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-11-01
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.11 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
8UUQ
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BU of 8uuq by Molmil
Structure of the Measles virus Fusion protein in the pre-fusion conformation with bound [FIP-HRC]2-PEG11
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion glycoprotein F0, [FIP-HRC]2-PEG11, ...
Authors:Zyla, D, Saphire, E.O.
Deposit date:2023-11-01
Release date:2024-07-03
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (2.34 Å)
Cite:A neutralizing antibody prevents postfusion transition of measles virus fusion protein.
Science, 384, 2024
7JZT
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BU of 7jzt by Molmil
Low resolution crystal structure of Zaire Ebola virus VP40 in space group P6422
Descriptor: Matrix protein VP40
Authors:Norris, M.J, Bornholdt, Z.A, Saphire, E.O.
Deposit date:2020-09-02
Release date:2020-10-21
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.77 Å)
Cite:Ebola and Marburg virus matrix layers are locally ordered assemblies of VP40 dimers.
Elife, 9, 2020
7JZJ
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Crystal structure demonstrating CTD-CTD interactions of Zaire Ebola virus VP40 dimer
Descriptor: Matrix protein VP40, PENTAETHYLENE GLYCOL
Authors:Norris, M.J, Bornholdt, Z.A, Saphire, E.O.
Deposit date:2020-09-02
Release date:2020-10-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Ebola and Marburg virus matrix layers are locally ordered assemblies of VP40 dimers.
Elife, 9, 2020

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數據於2024-07-17公開中

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