7CP0
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![BU of 7cp0 by Molmil](/molmil-images/mine/7cp0) | Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase | Descriptor: | 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ... | Authors: | Dileep, K.V, Ihara, K, Sakai, N, Shirozu, M, Zhang, K.Y.J. | Deposit date: | 2020-08-05 | Release date: | 2021-01-13 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Piperidine-4-carboxamide as a new scaffold for designing secretory glutaminyl cyclase inhibitors. Int.J.Biol.Macromol., 170, 2020
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8H4M
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![BU of 8h4m by Molmil](/molmil-images/mine/8h4m) | Crystal Structure of GTP-bound Irgb6_T95D mutant | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, T-cell-specific guanine nucleotide triphosphate-binding protein 2 | Authors: | Saijo-Hamano, Y, Okuma, H, Sakai, N, Kato, T, Imasaki, T, Nitta, R. | Deposit date: | 2022-10-10 | Release date: | 2023-10-18 | Method: | X-RAY DIFFRACTION (1.68 Å) | Cite: | Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I To Be Published
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8H4O
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![BU of 8h4o by Molmil](/molmil-images/mine/8h4o) | Crystal Structure of nucleotide-free Irgb6_T95D mutant | Descriptor: | T-cell-specific guanine nucleotide triphosphate-binding protein 2 | Authors: | Saijo-Hamano, Y, Okuma, H, Sakai, N, Kato, T, Imasaki, T, Nitta, R. | Deposit date: | 2022-10-11 | Release date: | 2023-10-18 | Last modified: | 2024-07-03 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural basis of Irgb6 inactivation by Toxoplasma gondii through the phosphorylation of switch I. Genes Cells, 29, 2024
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8J9F
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![BU of 8j9f by Molmil](/molmil-images/mine/8j9f) | Structure of STG-hydrolyzing beta-glucosidase 1 (PSTG1) | Descriptor: | Beta-glucosidase, GLYCEROL | Authors: | Yanai, T, Imaizumi, R, Takahashi, Y, Katsumura, E, Yamamoto, M, Nakayama, T, Yamashita, S, Takeshita, K, Sakai, N, Matsuura, H. | Deposit date: | 2023-05-03 | Release date: | 2024-04-10 | Last modified: | 2024-07-17 | Method: | X-RAY DIFFRACTION (2.85 Å) | Cite: | Structural insights into a bacterial beta-glucosidase capable of degrading sesaminol triglucoside to produce sesaminol: toward the understanding of the aglycone recognition mechanism by the C-terminal lid domain. J.Biochem., 174, 2023
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8JRD
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![BU of 8jrd by Molmil](/molmil-images/mine/8jrd) | Chalcone synthase from Glycine max (L.) Merr (soybean) complexed with naringenin and coenzyme A | Descriptor: | 1,2-ETHANEDIOL, COENZYME A, DI(HYDROXYETHYL)ETHER, ... | Authors: | Waki, T, Imaizumi, R, Nakata, S, Yanai, T, Takeshita, K, Sakai, N, Kataoka, K, Yamamoto, M, Nakayama, T, Yamashita, S. | Deposit date: | 2023-06-16 | Release date: | 2024-06-19 | Last modified: | 2024-07-17 | Method: | X-RAY DIFFRACTION (1.83 Å) | Cite: | Structural insights into catalytic promiscuity of chalcone synthase from Glycine max (L.) Merr.: Coenzyme A-induced alteration of product specificity. Biochem.Biophys.Res.Commun., 718, 2024
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8KGA
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![BU of 8kga by Molmil](/molmil-images/mine/8kga) | SlNDPS1-AtcPT4 Chimera | Descriptor: | 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Dimethylallylcistransferase CPT1, ... | Authors: | Suenaga-Hiromori, M, Ishii, T, Imaizumi, R, Takeshita, K, Yanai, T, Matsuura, H, Sakai, N, Yamaguchi, H, Yanbe, F, Waki, T, Tozawa, Y, Miyagi-Inoue, Y, Yamamoto, M, Kataoka, K, Nakayama, T, Yamashita, S, Takahashi, S. | Deposit date: | 2023-08-18 | Release date: | 2024-08-21 | Method: | X-RAY DIFFRACTION (2.182 Å) | Cite: | Biosynthesising various rubber-like polymers by reconstituting prenyltransferases on Hevea rubber particles: molecular and structural bases of the versatile system To Be Published
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8KGB
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![BU of 8kgb by Molmil](/molmil-images/mine/8kgb) | SlNDPS1-AtcPT4 Chimera complexed with GSPP, Mg2+, and IPP | Descriptor: | 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Dimethylallylcistransferase CPT1, chloroplastic,Dehydrodolichyl diphosphate synthase 2, ... | Authors: | Suenaga-Hiromori, M, Ishii, T, Imaizumi, R, Takeshita, K, Yanai, T, Matsuura, H, Sakai, N, Yamaguchi, H, Yanbe, F, Waki, T, Tozawa, Y, Miyagi-Inoue, Y, Yamamoto, M, Kataoka, K, Nakayama, T, Yamashita, S, Takahashi, S. | Deposit date: | 2023-08-18 | Release date: | 2024-08-21 | Method: | X-RAY DIFFRACTION (2.32 Å) | Cite: | A versatile system for enzymatic synthesis of natural and unnatural polyisoprenoids on rubber particles To Be Published
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1WLT
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![BU of 1wlt by Molmil](/molmil-images/mine/1wlt) | Crystal Structure of dTDP-4-dehydrorhamnose 3,5-epimerase homologue from Sulfolobus tokodaii | Descriptor: | 176aa long hypothetical dTDP-4-dehydrorhamnose 3,5-epimerase | Authors: | Watanabe, N, Sakai, N, Zilian, Z, Kawarabayasi, Y, Tanaka, I. | Deposit date: | 2004-06-29 | Release date: | 2005-07-26 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal Structure of dTDP-4-dehydrorhamnose 3,5-epimerase homologue to be published
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1WU7
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![BU of 1wu7 by Molmil](/molmil-images/mine/1wu7) | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum | Descriptor: | Histidyl-tRNA synthetase | Authors: | Tanaka, Y, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I. | Deposit date: | 2004-12-01 | Release date: | 2005-12-06 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystal structure of histidyl-tRNA synthetase from Thermoplasma acidophilum To be Published
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7F0V
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![BU of 7f0v by Molmil](/molmil-images/mine/7f0v) | Structure of the M305I mutant of CueO | Descriptor: | Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ... | Authors: | Kawano, T.K, Takata, S.T, Sakai, N.S, Imaizumi, R.I, Nakata, S.N, Takeshita, K.T, Yamashita, S.Y, Sakurai, T.S, Kataoka, K.K. | Deposit date: | 2021-06-07 | Release date: | 2022-06-15 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.494 Å) | Cite: | Structure of the M305I mutant of CueO To Be Published
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7F19
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![BU of 7f19 by Molmil](/molmil-images/mine/7f19) | Structure of the G304E mutant of CueO | Descriptor: | Blue copper oxidase CueO, COPPER (II) ION, CU-O-CU LINKAGE, ... | Authors: | Takata, S.T, Kawano, T.K, Nakata, S.N, Takado, K.T, Imaizumi, R.I, Sakai, N.S, Takeshita, K.T, Yamashita, S.Y, Sakurai, T.S, Kataoka, K.K. | Deposit date: | 2021-06-08 | Release date: | 2022-06-15 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.773 Å) | Cite: | Structure of the G304E mutant of CueO To Be Published
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7D8E
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![BU of 7d8e by Molmil](/molmil-images/mine/7d8e) | Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09 | Descriptor: | 1,2-ETHANEDIOL, Glutaminyl-peptide cyclotransferase, SULFATE ION, ... | Authors: | Dileep, K.V, Ihara, K, Sakai, N, Shirozu, M, Zhang, K.Y.J. | Deposit date: | 2020-10-08 | Release date: | 2021-12-08 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Crystal Structure of double mutant Y115E Y117E human Secretory Glutaminyl Cyclase in complex with LSB-09 To Be Published
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1IXL
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![BU of 1ixl by Molmil](/molmil-images/mine/1ixl) | Crystal structure of uncharacterized protein PH1136 from Pyrococcus horikoshii | Descriptor: | hypothetical protein PH1136 | Authors: | Tajika, Y, Sakai, N, Tanaka, Y, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2002-06-27 | Release date: | 2003-09-09 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Crystal structure of conserved protein PH1136 from Pyrococcus horikoshii. Proteins, 55, 2004
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1IXK
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![BU of 1ixk by Molmil](/molmil-images/mine/1ixk) | Crystal Structure Analysis of Methyltransferase Homolog Protein from Pyrococcus Horikoshii | Descriptor: | Methyltransferase | Authors: | Ishikawa, I, Sakai, N, Yao, M, Watanabe, N, Tamura, T, Tanaka, I. | Deposit date: | 2002-06-25 | Release date: | 2003-09-09 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.9 Å) | Cite: | Crystal structure of human p120 homologue protein PH1374 from Pyrococcus horikoshii PROTEINS: STRUCT.,FUNCT.,GENET., 54, 2004
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1IU8
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![BU of 1iu8 by Molmil](/molmil-images/mine/1iu8) | The X-ray Crystal Structure of Pyrrolidone-Carboxylate Peptidase from Hyperthermophilic Archaeon Pyrococcus horikoshii | Descriptor: | Pyrrolidone-carboxylate peptidase | Authors: | Sokabe, M, Kawamura, T, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2002-02-28 | Release date: | 2002-03-20 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | The X-ray crystal structure of pyrrolidone-carboxylate peptidase from hyperthermophilic archaea Pyrococcus horikoshii J.STRUCT.FUNCT.GENOM., 2, 2002
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1UB9
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![BU of 1ub9 by Molmil](/molmil-images/mine/1ub9) | Structure of the transcriptional regulator homologue protein from Pyrococcus horikoshii OT3 | Descriptor: | Hypothetical protein PH1061 | Authors: | Okada, U, Sakai, N, Tajika, Y, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2003-04-03 | Release date: | 2004-05-04 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structural analysis of the transcriptional regulator homolog protein from Pyrococcus horikoshii OT3. Proteins, 63, 2006
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1VAJ
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![BU of 1vaj by Molmil](/molmil-images/mine/1vaj) | Crystal Structure of Uncharacterized Protein PH0010 From Pyrococcus horikoshii | Descriptor: | Hypothetical protein PH0010 | Authors: | Tajika, Y, Sakai, N, Tamura, T, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2004-02-17 | Release date: | 2005-01-25 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | Crystal structure of PH0010 from Pyrococcus horikoshii, which is highly homologous to human AMMECR 1C-terminal region Proteins, 58, 2005
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2ZDS
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![BU of 2zds by Molmil](/molmil-images/mine/2zds) | Crystal Structure of SCO6571 from Streptomyces coelicolor A3(2) | Descriptor: | Putative DNA-binding protein | Authors: | Begum, P, Gao, Y.G, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2007-11-27 | Release date: | 2008-12-02 | Last modified: | 2019-10-16 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Crystal structure of SCO6571 from Streptomyces coelicolor A3(2). Protein Pept.Lett., 15, 2008
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1V30
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![BU of 1v30 by Molmil](/molmil-images/mine/1v30) | Crystal Structure Of Uncharacterized Protein PH0828 From Pyrococcus horikoshii | Descriptor: | 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Hypothetical UPF0131 protein PH0828 | Authors: | Tajika, Y, Sakai, N, Yao, M, Watanabe, N, Tanaka, I. | Deposit date: | 2003-10-21 | Release date: | 2004-11-09 | Last modified: | 2023-12-27 | Method: | X-RAY DIFFRACTION (1.4 Å) | Cite: | Crystal structure of hypothetical protein PH0828 from Pyrococcus horikoshii. Proteins, 57, 2004
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1V4N
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![BU of 1v4n by Molmil](/molmil-images/mine/1v4n) | Structure of 5'-deoxy-5'-methylthioadenosine phosphorylase homologue from Sulfolobus tokodaii | Descriptor: | 271aa long hypothetical 5'-methylthioadenosine phosphorylase | Authors: | Kitago, Y, Yasutake, Y, Sakai, N, Tsujimura, M, Yao, M, Watanabe, N, Kawarabayasi, Y, Tanaka, I. | Deposit date: | 2003-11-14 | Release date: | 2005-01-04 | Last modified: | 2023-10-25 | Method: | X-RAY DIFFRACTION (2.45 Å) | Cite: | Crystal structure of Sulfolobus tokodaii MTAP To be Published
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3A5P
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![BU of 3a5p by Molmil](/molmil-images/mine/3a5p) | Crystal structure of hemagglutinin | Descriptor: | Haemagglutinin I | Authors: | Watanabe, N, Sakai, N, Nakamura, T, Nabeshima, Y, Kouno, T, Mizuguchi, M, Kawano, K. | Deposit date: | 2009-08-10 | Release date: | 2010-08-11 | Last modified: | 2024-04-03 | Method: | X-RAY DIFFRACTION (1.82 Å) | Cite: | The Structure of Physarum polycephalum hemagglutinin I suggests a minimal carbohydrate recognition domain of legume lectin fold J.Mol.Biol., 405, 2011
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7VES
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![BU of 7ves by Molmil](/molmil-images/mine/7ves) | Crystal Structure of nucleotide-free Irgb6 | Descriptor: | T-cell-specific guanine nucleotide triphosphate-binding protein 2 | Authors: | Saijo-Hamano, Y, Sakai, N, Nitta, R. | Deposit date: | 2021-09-10 | Release date: | 2021-11-03 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6. Life Sci Alliance, 5, 2022
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7VEX
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![BU of 7vex by Molmil](/molmil-images/mine/7vex) | Crystal Structure of GTP-bound Irgb6 | Descriptor: | GUANOSINE-5'-TRIPHOSPHATE, T-cell-specific guanine nucleotide triphosphate-binding protein 2 | Authors: | Saijo-Hamano, Y, Sakai, N, Nitta, R. | Deposit date: | 2021-09-10 | Release date: | 2021-11-03 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.51 Å) | Cite: | Structural basis of membrane recognition of Toxoplasma gondii vacuole by Irgb6. Life Sci Alliance, 5, 2022
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7VPC
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![BU of 7vpc by Molmil](/molmil-images/mine/7vpc) | Neryl diphosphate synthase from Solanum lycopersicum | Descriptor: | 1,2-ETHANEDIOL, D-MALATE, Neryl-diphosphate synthase 1 | Authors: | Imaizumi, R, Misawa, S, Takeshita, K, Sakai, N, Yamamoto, M, Kataoka, K, Nakayama, T, Takahashi, S, Yamashita, S. | Deposit date: | 2021-10-15 | Release date: | 2022-05-18 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Structure-based engineering of a short-chain cis-prenyltransferase to biosynthesize nonnatural all-cis-polyisoprenoids: molecular mechanisms for primer substrate recognition and ultimate product chain-length determination. Febs J., 289, 2022
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7VP0
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![BU of 7vp0 by Molmil](/molmil-images/mine/7vp0) | Crystal structure of P domain from norovirus GI.9 capsid protein. | Descriptor: | MAGNESIUM ION, VP1 | Authors: | Katsura, K, Sakai, N, Hasegawa, K, Kimura-Someya, T, Shirouzu, M. | Deposit date: | 2021-10-15 | Release date: | 2022-08-31 | Last modified: | 2023-11-29 | Method: | X-RAY DIFFRACTION (2.1 Å) | Cite: | Lewis fucose is a key moiety for the recognition of histo-blood group antigens by GI.9 norovirus, as revealed by structural analysis. Febs Open Bio, 12, 2022
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