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PDB: 2547 results

5WW4
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Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 48 iron atoms per dodecamer
Descriptor: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
Authors:Williams, S.M, Chatterji, D.
Deposit date:2016-12-31
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
8OUO
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Human TPC2 in Complex with Antagonist (S)-SG-094
Descriptor: (1S)-6-methoxy-2-methyl-7-phenoxy-1-[(4-phenoxyphenyl)methyl]-3,4-dihydro-1H-isoquinoline, 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, 2-{[(4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranosyl)oxy]methyl}-4-{[(3beta,9beta,14beta,17beta,25R)-spirost-5-en-3-yl]oxy}butyl 4-O-alpha-D-glucopyranosyl-alpha-D-glucopyranoside, ...
Authors:Chi, G, Pike, A.C.W, Maclean, E.M, Li, H, Mukhopadhyay, S.M.M, Bohstedt, T, Wang, D, McKinley, G, Fernandez-Cid, A, Duerr, K.
Deposit date:2023-04-24
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for inhibition of the lysosomal two-pore channel TPC2 by a small molecule antagonist.
Structure, 2024
8P2U
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Crystal structure of S6BE with Silicotungstic Acid (STA) polyoxometalate
Descriptor: Keggin (STA), S6BE
Authors:Wouters, S.M.L, Kamata, K, Vandebroek, L.
Deposit date:2023-05-16
Release date:2024-06-12
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal structure of S6BE with Silicotungstic Acid (STA) polyoxometalate
To be published
6HUE
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ParkinS65N
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase parkin, GLYCEROL, ...
Authors:McWilliams, T.G, Barini, E, Pohjolan-Pirhonen, R, Brooks, S.P, Singh, F, Burel, S, Balk, K, Kumar, A, Montava-Garriga, L, Prescott, A.R, Hassoun, S.M, Mouton-Liger, F, Ball, G, Hills, R, Knebel, A, Ulusoy, A, Di Monte, D.A, Tamjar, J, Antico, O, Fears, K, Smith, L, Brambilla, R, Palin, E, Valori, M, Eerola-Rautio, J, Tienari, P, Corti, O, Dunnett, S.B, Ganley, I.G, Suomalainen, A, Muqit, M.M.K.
Deposit date:2018-10-07
Release date:2018-10-17
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Phosphorylation of Parkin at serine 65 is essential for its activation in vivo .
Open Biology, 8, 2018
8OXU
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Crystal Structure of the Hsp90-LA1011 Complex
Descriptor: ATP-dependent molecular chaperone HSP82, dimethyl 2,6-bis[2-(dimethylamino)ethyl]-1-methyl-4-[4-(trifluoromethyl)phenyl]-4~{H}-pyridine-3,5-dicarboxylate
Authors:Roe, S.M, Prodromou, C.
Deposit date:2023-05-02
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:The Crystal Structure of the Hsp90-LA1011 Complex and the Mechanism by Which LA1011 May Improve the Prognosis of Alzheimer's Disease.
Biomolecules, 13, 2023
5WNY
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DNA polymerase beta substrate complex with incoming 5-FdUTP
Descriptor: 2'-deoxy-5-fluorouridine 5'-(tetrahydrogen triphosphate), CALCIUM ION, CHLORIDE ION, ...
Authors:Schaich, M.A, Smith, M.R, Cloud, A.S, Holloran, S.M, Freudenthal, B.D.
Deposit date:2017-08-01
Release date:2017-09-13
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of a DNA Polymerase Inserting Therapeutic Nucleotide Analogues.
Chem. Res. Toxicol., 30, 2017
8JN6
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BU of 8jn6 by Molmil
Cryo-EM structure of the small tail club shape particle of dengue virus serotype 3 strain CH53489 in complex with human antibody DENV-290 Fab at 37 deg C
Descriptor: Human antibody DENV-290 heavy chain, Human antibody DENV-290 light chain, Polyprotein (Fragment)
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (9.8 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN3
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BU of 8jn3 by Molmil
Cryo-EM structure of dengue virus serotype 3 strain 863DK in complex with human antibody DENV-115 Fab at 37 deg C (subparticle LLR-LRR)
Descriptor: Envelope protein, Human antibody DENV-115 heavy chain, Human antibody DENV-115 light chain, ...
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (5.4 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN7
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BU of 8jn7 by Molmil
Cryo-EM structure of the big tail club shape particle of dengue virus serotype 3 strain CH53489 in complex with human antibody DENV-290 Fab at 37 deg C
Descriptor: Human antibody DENV-290 heavy chain, Human antibody DENV-290 light chain, Polyprotein (Fragment)
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (11 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN5
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BU of 8jn5 by Molmil
Cryo-EM structure of dengue virus serotype 3 strain 863DK in complex with human antibody DENV-290 Fab at 37 deg C (subparticle LLR-LRR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Human antibody DENV-290 heavy chain, ...
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN4
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BU of 8jn4 by Molmil
Cryo-EM structure of dengue virus serotype 3 strain 863DK in complex with human antibody DENV-290 Fab at 4 deg C (subparticle LLR-LRR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Human antibody DENV-290 heavy chain, ...
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN2
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BU of 8jn2 by Molmil
Cryo-EM structure of dengue virus serotype 3 strain 863DK in complex with human antibody DENV-115 Fab at 4 deg C (subparticle LLR-LRR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein, Human antibody DENV-115 heavy chain, ...
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
8JN1
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BU of 8jn1 by Molmil
Cryo-EM structure of dengue virus serotype 3 strain EHIE46200Y19 in complex with human antibody DENV-115 IgG at 4 deg C (subparticle LLR-LRR)
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Envelope protein (Fragment), Human antibody DENV-115 heavy chain, ...
Authors:Fibriansah, G, Ng, T.S, Tan, A.W.K, Shi, J, Lok, S.M.
Deposit date:2023-06-06
Release date:2024-06-12
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ultrapotent human antibodies lock E protein dimers of diverse DENV3 morphological variants
To Be Published
5WW3
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BU of 5ww3 by Molmil
Crystal structure of the second DNA-Binding protein under starvation from Mycobacterium smegmatis soaked with iron in the ratio of 24 iron atoms per dodecamer
Descriptor: CHLORIDE ION, FE (II) ION, FE (III) ION, ...
Authors:Williams, S.M, Chatterji, D.
Deposit date:2016-12-31
Release date:2017-08-09
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
5WW9
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BU of 5ww9 by Molmil
Crystal structure of R73E mutant of the second DNA-Binding protein under starvation from Mycobacterium smegmatis
Descriptor: CHLORIDE ION, FE (III) ION, MAGNESIUM ION, ...
Authors:Williams, S.M, Chatterji, D.
Deposit date:2016-12-31
Release date:2017-08-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Flexible aspartates propel iron to the ferroxidation sites along pathways stabilized by a conserved arginine in Dps proteins from Mycobacterium smegmatis
Metallomics, 9, 2017
8PJU
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BU of 8pju by Molmil
Crystal structure of the computationally designed SAKe6DEtal protein
Descriptor: SAKe6DEtal
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
6FPX
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BU of 6fpx by Molmil
Structure of S. pombe Mmi1 in complex with 11-mer RNA
Descriptor: GLYCEROL, RNA (5'-R(P*UP*UP*UP*AP*AP*AP*CP*CP*UP*A)-3'), YTH domain-containing protein mmi1
Authors:Stowell, J.A.W, Hill, C.H, Yu, M, Wagstaff, J.L, McLaughlin, S.H, Freund, S.M.V, Passmore, L.A.
Deposit date:2018-02-12
Release date:2018-05-09
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:A low-complexity region in the YTH domain protein Mmi1 enhances RNA binding.
J. Biol. Chem., 293, 2018
8PJQ
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BU of 8pjq by Molmil
Crystal structure of the SAKe2BE protein
Descriptor: SAKe2BE
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
8PJW
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BU of 8pjw by Molmil
Crystal structure of the computationally designed SAKe6FE protein
Descriptor: SAKe6FE
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
8PJZ
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BU of 8pjz by Molmil
Crystal structure of the computationally designed SAKe6EEtal protein
Descriptor: SAKe6EEtal
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
8PJV
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BU of 8pjv by Molmil
Crystal structure of the computationally designed SAKe6DR protein
Descriptor: SAKe6DR
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.14 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
8PJY
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Crystal structure of the computationally designed SAKe6EEref protein
Descriptor: SAKe6EEref
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Computational design of the SAKe scaffold proteins
To Be Published
8PJR
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Crystal structure of the SAKe6AC-LB protein
Descriptor: SAKe6AC-LB
Authors:Wouters, S.M.L.
Deposit date:2023-06-23
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Computational design of the SAKe scaffold protein
To Be Published
8P7W
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Structure of 5D3-Fab and nanobody(Nb8)-bound ABCG2
Descriptor: 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ATP-binding cassette sub-family G member 2, ...
Authors:Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
Deposit date:2023-05-31
Release date:2023-08-30
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.04 Å)
Cite:Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023
8P8J
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Structure of 5D3-Fab and nanobody(Nb96)-bound ABCG2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 5D3(Fab) heavy chain variable domain, 5D3(Fab) light chain variable domain, ...
Authors:Irobalieva, R.N, Manolaridis, I, Jackson, S.M, Ni, D, Pardon, E, Stahlberg, H, Steyaert, J, Locher, K.P.
Deposit date:2023-06-01
Release date:2023-08-30
Last modified:2023-09-13
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural Basis of the Allosteric Inhibition of Human ABCG2 by Nanobodies.
J.Mol.Biol., 435, 2023

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PDB entries from 2024-07-24

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