Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2559 results

7Y72
DownloadVisualize
BU of 7y72 by Molmil
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7 (focused refinement on Fab-RBD interface)
Descriptor: Fab E7 heavy chain, Fab E7 light chain, Spike glycoprotein
Authors:Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
Deposit date:2022-06-21
Release date:2023-08-02
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (4.03 Å)
Cite:Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
7Y71
DownloadVisualize
BU of 7y71 by Molmil
SARS-CoV-2 spike glycoprotein trimer complexed with Fab fragment of anti-RBD antibody E7
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fab E7 heavy chain, ...
Authors:Chia, W.N, Tan, C.W, Tan, A.W.K, Young, B, Starr, T.N, Lopez, E, Fibriansah, G, Barr, J, Cheng, S, Yeoh, A.Y.Y, Yap, W.C, Lim, B.L, Ng, T.S, Sia, W.R, Zhu, F, Chen, S, Zhang, J, Greaney, A.J, Chen, M, Au, G.G, Paradkar, P, Peiris, M, Chung, A.W, Bloom, J.D, Lye, D, Lok, S.M, Wang, L.F.
Deposit date:2022-06-21
Release date:2023-08-02
Last modified:2023-08-09
Method:ELECTRON MICROSCOPY (3.12 Å)
Cite:Potent pan huACE2-dependent sarbecovirus neutralizing monoclonal antibodies isolated from a BNT162b2-vaccinated SARS survivor.
Sci Adv, 9, 2023
1GK5
DownloadVisualize
BU of 1gk5 by Molmil
Solution Structure the mEGF/TGFalpha44-50 chimeric growth factor
Descriptor: Pro-epidermal growth factor,Protransforming growth factor alpha
Authors:Chamberlin, S.G, Brennan, L, Puddicombe, S.M, Davies, D.E, Turner, D.L.
Deposit date:2001-08-08
Release date:2002-08-08
Last modified:2018-03-28
Method:SOLUTION NMR
Cite:Solution Structure of the Megf/Tgfalpha44-50 Chimeric Growth Factor.
Eur.J.Biochem., 268, 2001
7WF3
DownloadVisualize
BU of 7wf3 by Molmil
Composite map of human Kv1.3 channel in apo state with beta subunits
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3, ...
Authors:Tyagi, A, Ahmed, T, Jian, S, Bajaj, S, Ong, S.T, Goay, S.S.M, Zhao, Y, Vorobyov, I, Tian, C, Chandy, K.G, Bhushan, S.
Deposit date:2021-12-25
Release date:2022-02-09
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Rearrangement of a unique Kv1.3 selectivity filter conformation upon binding of a drug.
Proc.Natl.Acad.Sci.USA, 119, 2022
7WF4
DownloadVisualize
BU of 7wf4 by Molmil
Composite map of human Kv1.3 channel in dalazatide-bound state with beta subunits
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, POTASSIUM ION, Potassium voltage-gated channel subfamily A member 3, ...
Authors:Tyagi, A, Ahmed, T, Jian, S, Bajaj, S, Ong, S.T, Goay, S.S.M, Zhao, Y, Vorobyov, I, Tian, C, Chandy, K.G, Bhushan, S.
Deposit date:2021-12-25
Release date:2022-02-09
Last modified:2022-05-25
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Rearrangement of a unique Kv1.3 selectivity filter conformation upon binding of a drug.
Proc.Natl.Acad.Sci.USA, 119, 2022
7YXY
DownloadVisualize
BU of 7yxy by Molmil
Cryo-EM structure of USP9X, local refinement of monomer
Descriptor: Probable ubiquitin carboxyl-terminal hydrolase FAF-X
Authors:Deme, J.C, Halabelian, L, Arrowsmith, C.H, Lea, S.M, Structural Genomics Consortium (SGC)
Deposit date:2022-02-16
Release date:2022-03-02
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Cryo-EM structure of USP9X
To Be Published
7YXX
DownloadVisualize
BU of 7yxx by Molmil
Cryo-EM structure of USP9X
Descriptor: Probable ubiquitin carboxyl-terminal hydrolase FAF-X
Authors:Deme, J.C, Halabelian, L, Arrowsmith, C.H, Lea, S.M, Structural Genomics Consortium (SGC)
Deposit date:2022-02-16
Release date:2022-03-02
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structure of USP9X
To Be Published
7Z5S
DownloadVisualize
BU of 7z5s by Molmil
Crystal Structure of botulinum neurotoxin A2 cell binding domain in complex with GD1a
Descriptor: 1,2-ETHANEDIOL, Botulinum neurotoxin, HEXAETHYLENE GLYCOL, ...
Authors:Gregory, K.S, Acharya, K.R, Liu, S.M, Mahadeva, T.B.
Deposit date:2022-03-10
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural Features of Clostridium botulinum Neurotoxin Subtype A2 Cell Binding Domain.
Toxins, 14, 2022
7Z5T
DownloadVisualize
BU of 7z5t by Molmil
Crystal Structure of botulinum neurotoxin A2 cell binding domain
Descriptor: ACETATE ION, Botulinum neurotoxin, PENTAETHYLENE GLYCOL
Authors:Gregory, K.S, Acharya, K.R, Liu, S.M, Mahadeva, T.B.
Deposit date:2022-03-10
Release date:2022-06-08
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Structural Features of Clostridium botulinum Neurotoxin Subtype A2 Cell Binding Domain.
Toxins, 14, 2022
1EKV
DownloadVisualize
BU of 1ekv by Molmil
HUMAN BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL): THREE DIMENSIONAL STRUCTURE OF ENZYME INACTIVATED BY TRIS BOUND TO THE PYRIDOXAL-5'-PHOSPHATE ON ONE END AND ACTIVE SITE LYS202 NZ ON THE OTHER.
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL), PYRIDOXAL-5'-PHOSPHATE
Authors:Yennawar, N.H, Dunbar, J.H, Conway, M, Hutson, S.M, Farber, G.K.
Deposit date:2000-03-09
Release date:2001-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:The structure of human mitochondrial branched-chain aminotransferase.
Acta Crystallogr.,Sect.D, 57, 2001
1EKP
DownloadVisualize
BU of 1ekp by Molmil
CRYSTAL STRUCTURE OF HUMAN BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL) COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE AT 2.5 ANGSTROMS (MONOCLINIC FORM).
Descriptor: BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL), PYRIDOXAL-5'-PHOSPHATE
Authors:Yennawar, N.H, Dunbar, J.H, Conway, M, Hutson, S.M, Farber, G.K.
Deposit date:2000-03-09
Release date:2001-03-09
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:The structure of human mitochondrial branched-chain aminotransferase.
Acta Crystallogr.,Sect.D, 57, 2001
1JFD
DownloadVisualize
BU of 1jfd by Molmil
STRUCTURE OF INORGANIC PYROPHOSPHATASE
Descriptor: INORGANIC PYROPHOSPHATASE, SULFATE ION
Authors:Oganesyan, V, Avaeva, S.M, Huber, R, Harutyunyan, E.H.
Deposit date:1997-05-31
Release date:1997-12-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Escherichia coli inorganic pyrophosphatase complexed with SO4(2-). Ligand-induced molecular asymmetry.
FEBS Lett., 410, 1997
1EKF
DownloadVisualize
BU of 1ekf by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF HUMAN BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL) COMPLEXED WITH PYRIDOXAL-5'-PHOSPHATE AT 1.95 ANGSTROMS (ORTHORHOMBIC FORM)
Descriptor: BRANCHED CHAIN AMINO ACID AMINOTRANSFERASE (MITOCHONDRIAL), PYRIDOXAL-5'-PHOSPHATE
Authors:Yennawar, N.H, Dunbar, J.H, Conway, M, Hutson, S.M, Farber, G.K.
Deposit date:2000-03-08
Release date:2001-03-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The structure of human mitochondrial branched-chain aminotransferase.
Acta Crystallogr.,Sect.D, 57, 2001
4V47
DownloadVisualize
BU of 4v47 by Molmil
Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome
Descriptor: 16S RIBOSOMAL RNA, 23S ribosomal RNA, 30S RIBOSOMAL PROTEIN S10, ...
Authors:Gao, H, Sengupta, J, Valle, M, Korostelev, A, Eswar, N, Stagg, S.M, Van Roey, P, Agrawal, R.K, Harvey, S.T, Sali, A, Chapman, M.S, Frank, J.
Deposit date:2003-05-06
Release date:2014-07-09
Last modified:2024-02-28
Method:ELECTRON MICROSCOPY (12.3 Å)
Cite:Study of the structural dynamics of the E. coli 70S ribosome using real space refinement
Cell(Cambridge,Mass.), 113, 2003
6E6W
DownloadVisualize
BU of 6e6w by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 3-hydroxy-6-(2-methyl-4-(1H-tetrazol-5-yl)phenyl)-4-oxo-1,4-dihydropyridine-2-carboxylic acid
Descriptor: 3-hydroxy-6-[2-methyl-4-(1H-tetrazol-5-yl)phenyl]-4-oxo-1,4-dihydropyridine-2-carboxylic acid, MANGANESE (II) ION, Polymerase acidic protein
Authors:Dick, B.L, Morrison, C.N, Credille, C.V, Cohen, S.M.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:SAR Exploration of Tight-Binding Inhibitors of Influenza Virus PA Endonuclease.
J.Med.Chem., 62, 2019
6EAX
DownloadVisualize
BU of 6eax by Molmil
Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
Descriptor: CALCIUM ION, CYS-THR-LYS-SER-ILE-CYS, Cationic trypsin, ...
Authors:Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
Deposit date:2018-08-03
Release date:2019-08-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.189 Å)
Cite:Crystallographic structure of the cyclic hexapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21
To Be Published
4UZM
DownloadVisualize
BU of 4uzm by Molmil
Shotgun proteolysis: A practical application
Descriptor: PUTATIVE MEMBRANE PROTEIN IGAA HOMOLOG
Authors:Allen, M.D, Bycroft, M, Freund, S.M.V, Christ, D.
Deposit date:2014-09-05
Release date:2014-09-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a Soluble Fragment Derived from a Membrane Protein by Shotgun Proteolysis.
Protein Eng.Des.Sel., 28, 2015
5EOP
DownloadVisualize
BU of 5eop by Molmil
Crystal structure of human Angiogenin at 1.35 Angstroms resolution
Descriptor: Angiogenin
Authors:Chatzileontiadou, D.S.M, Tsirkone, V.G, Dossi, K, Leonidas, D.D.
Deposit date:2015-11-10
Release date:2016-08-17
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The ammonium sulfate inhibition of human angiogenin.
Febs Lett., 590, 2016
5X3T
DownloadVisualize
BU of 5x3t by Molmil
VapBC from Mycobacterium tuberculosis
Descriptor: Antitoxin VapB26, MAGNESIUM ION, Ribonuclease VapC26
Authors:Kang, S.M, Kim, D.H, Yoon, H.J, Lee, B.J.
Deposit date:2017-02-07
Release date:2017-06-07
Last modified:2017-12-06
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Functional details of the Mycobacterium tuberculosis VapBC26 toxin-antitoxin system based on a structural study: insights into unique binding and antibiotic peptides.
Nucleic Acids Res., 45, 2017
6EQI
DownloadVisualize
BU of 6eqi by Molmil
Structure of PINK1 bound to ubiquitin
Descriptor: GLYCEROL, Nb696, Serine/threonine-protein kinase PINK1, ...
Authors:Schubert, A.F, Gladkova, C, Pardon, E, Wagstaff, J.L, Freund, S.M.V, Steyaert, J, Maslen, S, Komander, D.
Deposit date:2017-10-13
Release date:2017-11-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of PINK1 in complex with its substrate ubiquitin.
Nature, 552, 2017
6E6X
DownloadVisualize
BU of 6e6x by Molmil
The N-terminal domain of PA endonuclease from the influenza H1N1 virus in complex with 1-(4-(1H-tetrazol-5-yl)phenyl)-5-hydroxy-2-methylpyridin-4(1H)-one
Descriptor: 1,2-ETHANEDIOL, 5-hydroxy-2-methyl-1-[4-(1H-tetrazol-5-yl)phenyl]pyridin-4(1H)-one, MANGANESE (II) ION, ...
Authors:Dick, B.L, Morrison, C.N, Credille, C.V, Cohen, S.M.
Deposit date:2018-07-25
Release date:2019-07-31
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:SAR Exploration of Tight-Binding Inhibitors of Influenza Virus PA Endonuclease.
J.Med.Chem., 62, 2019
4UZX
DownloadVisualize
BU of 4uzx by Molmil
High-resolution NMR structures of the domains of Saccharomyces cerevisiae Tho1
Descriptor: PROTEIN THO1
Authors:Jacobsen, J.O.B, Allen, M.D, Freund, S.M.V, Bycroft, M.
Deposit date:2014-09-09
Release date:2014-12-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:High-Resolution NMR Structures of the Domains of Saccharomyces Cerevisiae Tho1.
Acta Crystallogr.,Sect.F, 72, 2016
6EAU
DownloadVisualize
BU of 6eau by Molmil
Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
Descriptor: CALCIUM ION, CYS-THR-LYS-SER-ILE-PRO-PRO-CYS, Cationic trypsin, ...
Authors:Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
Deposit date:2018-08-03
Release date:2019-08-07
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.18 Å)
Cite:Crystallographic structure of the octapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
To Be Published
5XTU
DownloadVisualize
BU of 5xtu by Molmil
Crystal Structure of GDSL Esterase of Photobacterium sp. J15
Descriptor: 1,2-ETHANEDIOL, CACODYLATE ION, CALCIUM ION, ...
Authors:Mazlan, S.N.H.S, Jonet, M.A, Leow, T.C, Ali, M.S.M, Rahman, R.N.Z.R.A.
Deposit date:2017-06-21
Release date:2018-10-10
Last modified:2018-10-17
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Crystallization and structure elucidation of GDSL esterase of Photobacterium sp. J15.
Int. J. Biol. Macromol., 119, 2018
6EAT
DownloadVisualize
BU of 6eat by Molmil
Crystallographic structure of the cyclic nonapeptide derived from the BTCI inhibitor bound to beta-trypsin in space group P 21 21 21.
Descriptor: 9MER-PEPTIDE, CALCIUM ION, Cationic trypsin, ...
Authors:Fernandes, J.C, Valadares, N.F, Freitas, S.M, Barbosa, J.A.R.G.
Deposit date:2018-08-03
Release date:2019-03-13
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.149 Å)
Cite:Crystallographic structure of a complex between trypsin and a nonapeptide derived from a Bowman-Birk inhibitor found in Vigna unguiculata seeds.
Arch. Biochem. Biophys., 665, 2019

224201

건을2024-08-28부터공개중

PDB statisticsPDBj update infoContact PDBjnumon