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PDB: 2498 results

6F94
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Crystal Structure of E. coli GyraseB 24kDa in complex with 6-[(ethylcarbamoyl)amino]-4-[(3-methyphenyl)amino]-N-(3-methyphenyl)pyridine-3-carboxamide
Descriptor: 6-(ethylcarbamoylamino)-~{N}-(3-methylphenyl)-4-[(3-methylphenyl)amino]pyridine-3-carboxamide, DNA gyrase subunit B
Authors:Narramore, S.K, Stevenson, C.E.M, Lawson, D.M, Maxwell, A, Fishwick, C.W.G.
Deposit date:2017-12-14
Release date:2019-06-26
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:New insights into the binding mode of pyridine-3-carboxamide inhibitors of E. coli DNA gyrase.
Bioorg.Med.Chem., 27, 2019
1R6Q
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ClpNS with fragments
Descriptor: ATP-dependent Clp protease ATP-binding subunit clpA, ATP-dependent Clp protease adaptor protein clpS, BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUM, ...
Authors:Xia, D, Maurizi, M.R, Guo, F, Singh, S.K, Esser, L.
Deposit date:2003-10-16
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystallographic investigation of peptide binding sites in the N-domain of the ClpA chaperone.
J.Struct.Biol., 146, 2004
1U02
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Crystal structure of trehalose-6-phosphate phosphatase related protein
Descriptor: GLYCEROL, MAGNESIUM ION, SODIUM ION, ...
Authors:Krishnamurthy, N.R, Kumaran, D, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-07-12
Release date:2004-07-20
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of trehalose-6-phosphate phosphatase-related protein: biochemical and biological implications.
Protein Sci., 15, 2006
1U35
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Crystal structure of the nucleosome core particle containing the histone domain of macroH2A
Descriptor: H2A histone family, Hist1h4i protein, Histone H3.1, ...
Authors:Chakravarthy, S, Gundimella, S.K, Caron, C, Perche, P.Y, Pehrson, J.R, Khochbin, S, Luger, K.
Deposit date:2004-07-20
Release date:2005-09-27
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structural characterization of the histone variant macroH2A.
Mol.Cell.Biol., 25, 2005
3SLT
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Pre-cleavage Structure of the Autotransporter EspP - N1023S Mutant
Descriptor: (HYDROXYETHYLOXY)TRI(ETHYLOXY)OCTANE, Serine protease espP
Authors:Barnard, T.B, Noinaj, N, Easley, N.C, Kuszak, A.J, Buchanan, S.K.
Deposit date:2011-06-25
Release date:2011-11-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Molecular basis for the activation of a catalytic asparagine residue in a self-cleaving bacterial autotransporter.
J.Mol.Biol., 415, 2012
1ZHG
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Crystal structure of Beta-Hydroxyacyl-Acyl Carrier Protein Dehydratase (FabZ) from Plasmodium falciparum
Descriptor: beta hydroxyacyl-acyl carrier protein dehydratase
Authors:Swarnamukhi, P.L, Sharma, S.K, Surolia, N, Surolia, A, Suguna, K.
Deposit date:2005-04-25
Release date:2006-05-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of dimeric FabZ of Plasmodium falciparum reveals conformational switching to active hexamers by peptide flips
Febs Lett., 580, 2006
2I5G
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Crystal strcuture of amidohydrolase from Pseudomonas aeruginosa
Descriptor: amidohydrolase
Authors:Min, T, Sauder, J.M, Wasserman, S.R, Smith, D, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-24
Release date:2006-09-05
Last modified:2021-10-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of amidohydrolase from Pseudomonas aeruginosa
To be Published
3WRN
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Minute virus of mice non-structural protein-1N-terminal nuclease domain reveals a unique Zn2+ coordination in the active site pocket and shows a novel mode of DNA recognition at the origin of replication
Descriptor: Non-capsid protein NS-1, SODIUM ION, ZINC ION
Authors:Tewary, S.K, Zhao, H, Tang, L.
Deposit date:2014-02-27
Release date:2015-01-21
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structures of minute virus of mice replication initiator protein N-terminal domain: Insights into DNA nicking and origin binding.
Virology, 476C, 2014
2I0O
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Crystal structure of Anopheles gambiae Ser/Thr phosphatase complexed with Zn2+
Descriptor: Ser/Thr phosphatase, ZINC ION
Authors:Jin, X, Sauder, J.M, Burley, S.K, Shapiro, L, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-10
Release date:2006-10-24
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural genomics of protein phosphatases.
J.STRUCT.FUNCT.GENOM., 8, 2007
2I52
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Crystal structure of protein PTO0218 from Picrophilus torridus, Pfam DUF372
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ramagopal, U.A, Gilmore, J, Toro, R, Bain, K.T, McKenzie, C, Reyes, C, Sauder, J.M, Burley, S.K, Almo, S.C, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-23
Release date:2006-09-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structure of hypothetical protein PTO0218 from Picrophilus torridus
To be Published
1R6O
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ATP-dependent Clp protease ATP-binding subunit clpA/ATP-dependent Clp protease adaptor protein clpS
Descriptor: ATP-dependent Clp protease ATP-binding subunit clpA, ATP-dependent Clp protease adaptor protein clpS, BIS-(2-HYDROXYETHYL)AMINO-TRIS(HYDROXYMETHYL)METHANE YTTRIUM, ...
Authors:Xia, D, Maurizi, M.R, Guo, F, Singh, S.K, Esser, L.
Deposit date:2003-10-15
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystallographic investigation of peptide binding sites in the N-domain of the ClpA chaperone
J.Struct.Biol., 146, 2004
2I6E
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BU of 2i6e by Molmil
Crystal structure of protein DR0370 from Deinococcus radiodurans, Pfam DUF178
Descriptor: Hypothetical protein, SULFATE ION
Authors:Tyagi, R, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-28
Release date:2006-09-05
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray structures of two proteins belonging to Pfam DUF178 revealed unexpected structural similarity to the DUF191 Pfam family.
Bmc Struct.Biol., 7, 2007
4ZOQ
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Crystal Structure of a Lanthipeptide Protease
Descriptor: Intracellular serine protease
Authors:Dong, S.H, Nair, S.K.
Deposit date:2015-05-06
Release date:2016-03-23
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Applications of the class II lanthipeptide protease LicP for sequence-specific, traceless peptide bond cleavage.
Chem Sci, 6, 2015
2I9U
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BU of 2i9u by Molmil
Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site
Descriptor: Cytosine/guanine deaminase related protein, FE (III) ION, GLYCEROL, ...
Authors:Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-06
Release date:2006-09-19
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Crystal Structure of Guanine Deaminase from C. acetobutylicum with bound guanine in the active site
To be Published
1WBC
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BU of 1wbc by Molmil
CRYSTALLIZATION AND PRELIMINARY X-RAY STUDIES OF PSOPHOCARPIN B1, A CHYMOTRYPSIN INHIBITOR FROM WINGED BEAN SEEDS
Descriptor: CHYMOTRYPSIN INHIBITOR (WCI)
Authors:Dattagupta, J.K, Podder, A, Chakrabarti, C, Sen, U, Dutta, S.K, Singh, M.
Deposit date:1995-11-30
Release date:1996-04-03
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structure of a Kunitz-type chymotrypsin from winged bean seeds at 2.95 A resolution.
Acta Crystallogr.,Sect.D, 52, 1996
6FMP
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Keap1 - peptide complex
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, ACY-ASP-GLU-GLU-THR-GLY-GLU-PHE, ...
Authors:Talapatra, S.K, Kozielski, F, Wells, G, Georgakopoulos, N.D.
Deposit date:2018-02-01
Release date:2018-08-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.92 Å)
Cite:Modified Peptide Inhibitors of the Keap1-Nrf2 Protein-Protein Interaction Incorporating Unnatural Amino Acids.
Chembiochem, 19, 2018
2I76
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BU of 2i76 by Molmil
Crystal structure of protein TM1727 from Thermotoga maritima
Descriptor: Hypothetical protein, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Madegowda, M, Eswaramoorthy, S, Seetharaman, J, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-08-30
Release date:2006-10-03
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of hypothetical protein TM1727 from Thermatoga maritima
TO BE PUBLISHED
1RTT
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Crystal structure determination of a putative NADH-dependent reductase using sulfur anomalous signal
Descriptor: SULFATE ION, conserved hypothetical protein
Authors:Agarwal, R, Swaminathan, S, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2003-12-10
Release date:2004-08-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Structure determination of an FMN reductase from Pseudomonas aeruginosa PA01 using sulfur anomalous signal.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1R6L
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BU of 1r6l by Molmil
Crystal Structure Of The tRNA Processing Enzyme Rnase pH From Pseudomonas Aeruginosa
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, Ribonuclease PH, SULFATE ION
Authors:Choi, J.M, Park, E.Y, Kim, J.H, Chang, S.K, Cho, Y.
Deposit date:2003-10-15
Release date:2004-02-17
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the functional importance of the hexameric ring structure of RNase PH
J.BIOL.CHEM., 279, 2004
3Q45
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Crystal structure of Dipeptide Epimerase from Cytophaga hutchinsonii complexed with Mg and dipeptide D-Ala-L-Val
Descriptor: D-ALANINE, MAGNESIUM ION, Mandelate racemase/muconate lactonizing enzyme family; possible chloromuconate cycloisomerase, ...
Authors:Lukk, T, Gerlt, J.A, Nair, S.K.
Deposit date:2010-12-22
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
1R6C
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BU of 1r6c by Molmil
High resolution structure of ClpN
Descriptor: ATP-dependent Clp protease ATP-binding subunit clpA
Authors:Xia, D, Maurizi, M.R, Guo, F, Singh, S.K, Esser, L.
Deposit date:2003-10-15
Release date:2005-02-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic investigation of peptide binding sites in the N-domain of the ClpA chaperone
J.Struct.Biol., 146, 2004
1YSN
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Solution structure of the anti-apoptotic protein Bcl-xL complexed with an acyl-sulfonamide-based ligand
Descriptor: 3-NITRO-N-{4-[2-(2-PHENYLETHYL)-1,3-BENZOTHIAZOL-5-YL]BENZOYL}-4-{[2-(PHENYLSULFANYL)ETHYL]AMINO}BENZENESULFONAMIDE, Apoptosis regulator Bcl-X
Authors:Oltersdorf, T, Elmore, S.W, Shoemaker, A.R, Armstrong, R.C, Augeri, D.J, Belli, B.A, Bruncko, M, Deckwerth, T.L, Dinges, J, Hajduk, P.J, Joseph, M.K, Kitada, S, Korsmeyer, S.J, Kunzer, A.R, Letai, A, Li, C, Mitten, M.J, Nettesheim, D.G, Ng, S, Nimmer, P.M, O'Connor, J.M, Oleksijew, A, Petros, A.M, Reed, J.C, Shen, W, Tahir, S.K, Thompson, C.B, Tomaselli, K.J, Wang, B, Wendt, M.D, Zhang, H, Fesik, S.W, Rosenberg, S.H.
Deposit date:2005-02-08
Release date:2005-06-07
Last modified:2023-11-29
Method:SOLUTION NMR
Cite:An inhibitor of Bcl-2 family proteins induces regression of solid tumours
Nature, 435, 2005
1U04
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Crystal structure of full length Argonaute from Pyrococcus furiosus
Descriptor: hypothetical protein PF0537
Authors:Song, J.J, Smith, S.K, Hannon, G.J, Joshua-Tor, L.
Deposit date:2004-07-12
Release date:2004-08-17
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Crystal Structure of Argonaute and Its Implications for RISC Slicer Activity
Science, 305, 2004
3PLU
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BU of 3plu by Molmil
Structure of Hub-1 protein in complex with Snu66 peptide (HINDI)
Descriptor: 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component, Ubiquitin-like modifier HUB1
Authors:Mishra, S.K, Ammon, T, Popowicz, G.M, Krajewski, M, Nagel, R.J, Ares, M, Holak, T.A, Jentsch, S.
Deposit date:2010-11-15
Release date:2011-06-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing.
Nature, 474, 2011
1TVF
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Crystal Structure of penicillin-binding protein 4 (PBP4) from Staphylococcus aureus
Descriptor: SULFATE ION, UNKNOWN LIGAND, penicillin binding protein 4
Authors:Rajashankar, K.R, Ray, S.S, Bonanno, J.B, Pinho, M, Tomasz, A, Burley, S.K, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2004-06-29
Release date:2004-07-06
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of penicillin-binding protein 4 (PBP4) from Staphylococcus aureus
To be Published

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