PDB Search results for query - Protein Data Bank Japan

PDB: 69 results

Lumbricus Erythrocruorin at 3.5A resolution
Descriptor:	CALCIUM ION, CARBON MONOXIDE, Extracellular globin 2, ...
Authors:	Royer Jr, W.E, Sharma, H, Strand, K, Knapp, J.E, Bhyravbhatla, B.
Deposit date:	2006-04-28
Release date:	2006-07-18
Last modified:	2024-10-30
Method:	X-RAY DIFFRACTION (3.5 Å)
Cite:	Lumbricus erythrocruorin at 3.5 a resolution: architecture of a megadalton respiratory complex. Structure, 14, 2006

1NWN

Crystals of CO-HbI in which the structure was converted to its unligated state, and then converted back to its original CO-ligated state.
Descriptor:	CARBON MONOXIDE, PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:	Knapp, J.E, Royer JR, W.E.
Deposit date:	2003-02-06
Release date:	2003-08-26
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin. Biochemistry, 42, 2003

1NWI

Crystal structure of CO-HbI transformed to an unligated state
Descriptor:	PROTOPORPHYRIN IX CONTAINING FE, globin I
Authors:	Knapp, J.E, Royer JR, W.E.
Deposit date:	2003-02-06
Release date:	2003-08-26
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin. Biochemistry, 42, 2003

1JWN

Crystal Structure of Scapharca inaequivalvis HbI, I114F Mutant Ligated to Carbon Monoxide.
Descriptor:	CARBON MONOXIDE, Globin I - Ark Shell, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:	2001-09-04
Release date:	2001-12-18
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Restricting the ligand-linked heme movement in Scapharca dimeric hemoglobin reveals tight coupling between distal and proximal contributions to cooperativity. Biochemistry, 40, 2001

6HBW

Crystal structure of deoxy-human hemoglobin beta6 glu->trp
Descriptor:	PROTEIN (HEMOGLOBIN ALPHA 1), PROTEIN (HEMOGLOBIN BETA), PROTOPORPHYRIN IX CONTAINING FE
Authors:	Harrington, D.J, Adachi, K, Royer Jr, W.E.
Deposit date:	1998-09-10
Release date:	1998-09-16
Last modified:	2023-09-20
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal structure of deoxy-human hemoglobin beta6 Glu --> Trp. Implications for the structure and formation of the sickle cell fiber. J.Biol.Chem., 273, 1998

1JZL

Crystal structure of Sapharca inaequivalvis HbI, I114M mutant ligated to carbon monoxide.
Descriptor:	CARBON MONOXIDE, GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:	2001-09-16
Release date:	2001-12-19
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity. Biochemistry, 40, 2001

1JZM

Crystal Structure of Scapharca inaequivalvis HbI, I114M Mutant in the Absence of ligand.
Descriptor:	GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:	2001-09-16
Release date:	2001-12-19
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity. Biochemistry, 40, 2001

1JZK

Crystal Structure of Scapharca inaequivalvis HbI, I114F mutant (deoxy)
Descriptor:	GLOBIN I - ARK SHELL, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Gibson, Q.H, Cushing, L, Royer Jr, W.E.
Deposit date:	2001-09-16
Release date:	2001-12-19
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Restricting the Ligand-Linked Heme Movement in Scapharca Dimeric Hemoglobin Reveals Tight Coupling between Distal and Proximal Contributions to Cooperativity. Biochemistry, 40, 2001

2Z85

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: M37F Unliganded
Descriptor:	Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-02
Release date:	2007-11-27
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

2Z8A

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: I25W with CO Bound to HEME and in the Presence of 3 Atoms of XE
Descriptor:	CARBON MONOXIDE, Globin-1, PHOSPHATE ION, ...
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-04
Release date:	2007-11-27
Last modified:	2023-11-01
Method:	X-RAY DIFFRACTION (1.06 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

1R18

Drosophila protein isoaspartyl methyltransferase with S-adenosyl-L-homocysteine
Descriptor:	Protein-L-isoaspartate(D-aspartate)-O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:	Bennett, E.J, Bjerregaard, J, Knapp, J.E, Chavous, D.A, Friedman, A.M, Royer Jr, W.E, O'Connor, C.M.
Deposit date:	2003-09-23
Release date:	2003-12-09
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Catalytic implications from the Drosophila protein L-isoaspartyl methyltransferase structure and site-directed mutagenesis. Biochemistry, 42, 2003

1F5O

2.9 ANGSTROM CRYSTAL STRUCTURE OF DEOXYGENATED LAMPREY HEMOGLOBIN V IN THE SPACE GROUP P2(1)2(1)2(1)
Descriptor:	HEMOGLOBIN V, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Heaslet, H.A, Royer Jr, W.E.
Deposit date:	2000-06-15
Release date:	2000-08-30
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Crystalline ligand transitions in lamprey hemoglobin. Structural evidence for the regulation of oxygen affinity. J.Biol.Chem., 276, 2001

1F5P

2.9 ANGSTROM CRYSTAL STRUCTURE OF LAMPREY HEMOGLOBIN THAT HAS BEEN EXPOSED TO CARBON MONOXIDE.
Descriptor:	CARBON MONOXIDE, HEMOGLOBIN V, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Heaslet, H.A, Royer Jr, W.E.
Deposit date:	2000-06-15
Release date:	2000-06-28
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (2.9 Å)
Cite:	Crystalline ligand transitions in lamprey hemoglobin. Structural evidence for the regulation of oxygen affinity. J.Biol.Chem., 276, 2001

1NXF

Ligand-linked transitions of deoxyHbI crystals exposed to CO.
Descriptor:	CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Royer JR, W.E.
Deposit date:	2003-02-10
Release date:	2003-08-26
Last modified:	2023-08-16
Method:	X-RAY DIFFRACTION (1.85 Å)
Cite:	Ligand-linked structural transitions in crystals of a cooperative dimeric hemoglobin. Biochemistry, 42, 2003

2GRH

M37V mutant of Scapharca dimeric hemoglobin, with CO bound
Descriptor:	CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E.
Deposit date:	2006-04-24
Release date:	2006-05-09
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2GRF

Crystal structure of Scapharca inaequivalvis HBI, M37V mutant in the absence of ligand
Descriptor:	Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Pahl, R, Srajer, V, Royer Jr, W.E.
Deposit date:	2006-04-24
Release date:	2006-05-09
Last modified:	2023-08-30
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Allosteric action in real time: Time-resolved crystallographic studies of a cooperative dimeric hemoglobin. Proc.Natl.Acad.Sci.Usa, 103, 2006

2AV3

F97L- no ligand
Descriptor:	Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:	2005-08-29
Release date:	2006-03-28
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.7 Å)
Cite:	Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin Biochemistry, 44, 2005

2AV0

F97L with CO bound
Descriptor:	CARBON MONOXIDE, Globin I, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Bonham, M.A, Gibson, Q.H, Nichols, J.C, Royer Jr, W.E.
Deposit date:	2005-08-29
Release date:	2006-03-28
Last modified:	2023-08-23
Method:	X-RAY DIFFRACTION (1.5 Å)
Cite:	Residue F4 plays a key role in modulating oxygen affinity and cooperativity in Scapharca dimeric hemoglobin Biochemistry, 44, 2005

2R4W

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: M37F with CO bound
Descriptor:	CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-02
Release date:	2007-11-27
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.8 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

2R4X

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: H69V/I114M co complex
Descriptor:	CARBON MONOXIDE, Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-02
Release date:	2007-11-27
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

2R4Y

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: H69V/I114M unliganded
Descriptor:	Globin-1, PROTOPORPHYRIN IX CONTAINING FE
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-02
Release date:	2007-11-27
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

2R4Z

Ligand Migration and Binding in The Dimeric Hemoglobin of Scapharca Inaequivalvis: Structure of I25W with CO
Descriptor:	CARBON MONOXIDE, Globin-1, PHOSPHATE ION, ...
Authors:	Knapp, J.E, Royer Jr, W.E, Nienhaus, K, Palladino, P, Nienhaus, G.U.
Deposit date:	2007-09-02
Release date:	2007-11-27
Last modified:	2023-10-25
Method:	X-RAY DIFFRACTION (1.6 Å)
Cite:	Ligand Migration and Binding in the Dimeric Hemoglobin of Scapharca inaequivalvis Biochemistry, 46, 2007

4LCJ

CtBP2 in complex with substrate MTOB
Descriptor:	4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, C-terminal-binding protein 2, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:	Hilbert, B.J, Schiffer, C.A, Royer Jr, W.E.
Deposit date:	2013-06-21
Release date:	2014-03-19
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.86 Å)
Cite:	Crystal structures of human CtBP in complex with substrate MTOB reveal active site features useful for inhibitor design. Febs Lett., 588, 2014

4LCE

CtBP1 in complex with substrate MTOB
Descriptor:	4-(METHYLSULFANYL)-2-OXOBUTANOIC ACID, C-terminal-binding protein 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:	Hilbert, B.J, Schiffer, C.A, Royer Jr, W.E.
Deposit date:	2013-06-21
Release date:	2014-03-19
Last modified:	2024-02-28
Method:	X-RAY DIFFRACTION (2.38 Å)
Cite:	Crystal structures of human CtBP in complex with substrate MTOB reveal active site features useful for inhibitor design. Febs Lett., 588, 2014

1X9F

Hemoglobin Dodecamer from Lumbricus Erythrocruorin
Descriptor:	CARBON MONOXIDE, Globin II, extracellular, ...
Authors:	Strand, K, Knapp, J.E, Bhyravbhatla, B, Royer Jr, W.E.
Deposit date:	2004-08-20
Release date:	2004-11-30
Last modified:	2024-11-20
Method:	X-RAY DIFFRACTION (2.6 Å)
Cite:	Crystal structure of the hemoglobin dodecamer from lumbricus erythrocruorin: allosteric core of giant annelid respiratory complexes J.Mol.Biol., 344, 2004

12 3 >

Total results:	69
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Royer JR"