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PDB: 408 件

1ND2
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The structure of Rhinovirus 16
分子名称: MYRISTIC ACID, ZINC ION, coat protein VP1, ...
著者Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
登録日2002-12-06
公開日2003-12-16
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1NCR
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The structure of Rhinovirus 16 when complexed with pleconaril, an antiviral compound
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, MYRISTIC ACID, ZINC ION, ...
著者Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
登録日2002-12-05
公開日2003-12-16
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1NA1
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The structure of HRV14 when complexed with Pleconaril
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, Coat protein VP1, Coat protein VP2, ...
著者Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
登録日2002-11-26
公開日2003-12-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1NCQ
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The structure of HRV14 when complexed with pleconaril, an antiviral compound
分子名称: 3-{3,5-DIMETHYL-4-[3-(3-METHYL-ISOXAZOL-5-YL)-PROPOXY]-PHENYL}-5-TRIFLUOROMETHYL-[1,2,4]OXADIAZOLE, COAT PROTEIN VP1, COAT PROTEIN VP2, ...
著者Zhang, Y, Simpson, A.A, Bator, C.M, Chakravarty, S, Pevear, D.C, Skochko, G.A, Tull, T.M, Diana, G, Rossmann, M.G.
登録日2002-12-05
公開日2003-12-16
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural and virological studies of the stages of virus replication that are affected by antirhinovirus compounds
J.Virol., 78, 2004
1S48
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Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-15
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S4F
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Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
分子名称: RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-16
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S49
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Crystal Structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from bovine viral diarrhea virus complexed with GTP
分子名称: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase
著者Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
登録日2004-01-15
公開日2004-04-06
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
3J2N
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The X-ray structure of the gp15 hexamer and the model of the gp18 protein fitted into the cryo-EM reconstruction of the contracted T4 tail
分子名称: Tail connector protein Gp15, Tail sheath protein Gp18
著者Fokine, A, Zhang, Z, Kanamaru, S, Bowman, V.D, Aksyuk, A, Arisaka, F, Rao, V.B, Rossmann, M.G.
登録日2012-11-10
公開日2013-03-06
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (16 Å)
主引用文献The molecular architecture of the bacteriophage t4 neck.
J.Mol.Biol., 425, 2013
3J2W
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Electron cryo-microscopy of Chikungunya virus
分子名称: Capsid protein, Glycoprotein E1, Glycoprotein E2
著者Sun, S, Xiang, Y, Rossmann, M.G.
登録日2013-01-28
公開日2013-04-24
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (5 Å)
主引用文献Structural analyses at pseudo atomic resolution of Chikungunya virus and antibodies show mechanisms of neutralization.
Elife, 2, 2013
3BKV
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X-ray structure of the bacteriophage phiKZ lytic transglycosylase, gp144, in complex with chitotetraose, (NAG)4
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, NICKEL (II) ION, SULFATE ION, ...
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-07
公開日2008-01-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
1EL6
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STRUCTURE OF BACTERIOPHAGE T4 GENE PRODUCT 11, THE INTERFACE BETWEEN THE BASEPLATE AND SHORT TAIL FIBERS
分子名称: BASEPLATE STRUCTURAL PROTEIN GP11
著者Leiman, P.G, Kostyuchenko, V.A, Schneider, M.M, Kurochkina, L.P, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2000-03-13
公開日2000-04-05
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of bacteriophage T4 gene product 11, the interface between the baseplate and short tail fibers.
J.Mol.Biol., 301, 2000
3BKH
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Crystal structure of the bacteriophage phiKZ lytic transglycosylase, gp144
分子名称: NICKEL (II) ION, SULFATE ION, lytic transglycosylase
著者Fokine, A, Miroshnikov, K.A, Shneider, M.M, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2007-12-06
公開日2008-01-08
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structure of the bacteriophage phi KZ lytic transglycosylase gp144.
J.Biol.Chem., 283, 2008
2QZH
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SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF
分子名称: Complement decay-accelerating factor
著者Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
登録日2007-08-16
公開日2007-10-30
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2R29
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Neutralization of dengue virus by a serotype cross-reactive antibody elucidated by cryoelectron microscopy and x-ray crystallography
分子名称: Envelope protein E, Heavy chain of Fab 1A1D-2, Light chain of Fab 1A1D-2
著者Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
登録日2007-08-24
公開日2007-12-25
最終更新日2018-01-24
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
2QZF
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SCR1 of DAF from 1ojv fitted into cryoEM density
分子名称: Complement decay-accelerating factor
著者Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
登録日2007-08-16
公開日2007-10-30
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
1N7Z
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Structure and location of gene product 8 in the bacteriophage T4 baseplate
分子名称: CHLORIDE ION, baseplate structural protein gp8
著者Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2002-11-18
公開日2003-06-10
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003
1N80
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Bacteriophage T4 baseplate structural protein gp8
分子名称: CHLORIDE ION, baseplate structural protein gp8
著者Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2002-11-18
公開日2003-06-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003
1N8B
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Bacteriophage T4 baseplate structural protein gp8
分子名称: BROMIDE ION, baseplate structural protein gp8
著者Leiman, P.G, Shneider, M.M, Kostyuchenko, V.A, Chipman, P.R, Mesyanzhinov, V.V, Rossmann, M.G.
登録日2002-11-20
公開日2003-06-10
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure and location of gene product 8 in the bacteriophage T4 baseplate
J.Mol.Biol., 328, 2003
1NO4
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Crystal Structure of the pre-assembly scaffolding protein gp7 from the double-stranded DNA bacteriophage phi29
分子名称: HEAD MORPHOGENESIS PROTEIN
著者Morais, M.C, Kanamaru, S, Badasso, M.O, Koti, J.S, Owen, B.A.L, McMurray, C.T, Anderson, D.L, Rossmann, M.G.
登録日2003-01-15
公開日2003-07-01
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Bacteriophage f29 scaffolding protein gp7 before and after prohead assembly
Nat.Struct.Biol., 10, 2003
1NOH
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The structure of bacteriophage phi29 scaffolding protein gp7 after prohead assembly
分子名称: HEAD MORPHOGENESIS PROTEIN
著者Morais, M.C, Kanamaru, S, Badasso, M.O, Koti, J.S, Owen, B.L, McMurray, C.T, L Anderson, D, Rossmann, M.G.
登録日2003-01-16
公開日2003-07-01
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Bacteriophage f29 scaffolding protein gp7 before and after prohead assembly
Nat.Struct.Biol., 10, 2003
1LD4
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Placement of the Structural Proteins in Sindbis Virus
分子名称: Coat protein C, GENERAL CONTROL PROTEIN GCN4, Spike glycoprotein E1, ...
著者Zhang, W, Mukhopadhyay, S, Pletnev, S.V, Baker, T.S, Kuhn, R.J, Rossmann, M.G.
登録日2002-04-08
公開日2002-11-04
最終更新日2019-11-06
実験手法ELECTRON MICROSCOPY (11.4 Å)
主引用文献Placement of the Structural Proteins in Sindbis virus
J.VIROL., 76, 2002
3B3I
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Citrullination-dependent differential presentation of a self-peptide by HLA-B27 subtypes
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Beltrami, A, Rossmann, M, Fiorillo, M.T, Paladini, F, Sorrentino, R, Saenger, W, Kumar, P, Ziegler, A, Uchanska-Ziegler, B.
登録日2007-10-22
公開日2008-07-22
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Citrullination-dependent differential presentation of a self-peptide by HLA-B27 subtypes.
J.Biol.Chem., 283, 2008
1P7N
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Dimeric Rous Sarcoma virus Capsid protein structure with an upstream 25-amino acid residue extension of C-terminal of Gag p10 protein
分子名称: GAG POLYPROTEIN CAPSID PROTEIN P27
著者Nandhagopal, N, Simpson, A.A, Johnson, M.C, Francisco, A.B, Schatz, G.W, Rossmann, M.G, Vogt, V.M.
登録日2003-05-02
公開日2003-12-23
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Dimeric rous sarcoma virus capsid protein structure relevant to immature gag assembly
J.Mol.Biol., 335, 2004
3N9G
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Crystal structure of the Fab fragment of the human neutralizing anti-West Nile Virus MAb CR4354
分子名称: Fab fragment of MAb CR4354, heavy chain, light chain
著者Kaufmann, B, Rossmann, M.G.
登録日2010-05-29
公開日2010-11-24
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.434 Å)
主引用文献Neutralization of West Nile virus by cross-linking of its surface proteins with Fab fragments of the human monoclonal antibody CR4354.
Proc.Natl.Acad.Sci.USA, 107, 2010
3IY3
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Variable domains of the computer generated model (WAM) of Fab 8 fitted into the cryoEM reconstruction of the virus-Fab 8 complex
分子名称: antibody fragment from neutralizing antibody 8 (heavy chain), antibody fragment from neutralizing antibody 8 (light chain)
著者Hafenstein, S, Bowman, V.D, Sun, T, Nelson, C.D, Palermo, L.M, Chipman, P.R, Battisti, A.J, Parrish, C.R, Rossmann, M.G.
登録日2009-04-09
公開日2009-05-12
最終更新日2018-07-18
実験手法ELECTRON MICROSCOPY (11.1 Å)
主引用文献Structural comparison of different antibodies interacting with parvovirus capsids
J.Virol., 83, 2009

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