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PDB: 408 results

3DTX
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BU of 3dtx by Molmil
Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive intestinal peptide type 1 receptor (VIPR) peptide (residues 400-408)
Descriptor: Beta-2-microglobulin, Double citrullinated vasoactive intestinal polypeptide receptor, MHC class I antigen (Fragment)
Authors:Beltrami, A, Gabdulkhakov, A, Rossmann, M, Ziegler, A, Uchanska-Ziegler, B, Saenger, W.
Deposit date:2008-07-16
Release date:2009-05-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Citrullination-and mhc polymorphism-dependent conformational changes of a self peptide
To be Published
1N6G
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BU of 1n6g by Molmil
The structure of immature Dengue-2 prM particles
Descriptor: major envelope protein E
Authors:Zhang, Y, Corver, J, Chipman, P.R, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
Deposit date:2002-11-10
Release date:2003-06-03
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structures of Immature flavivirus particles
EMBO J., 22, 2003
1NA4
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BU of 1na4 by Molmil
The structure of immature Yellow Fever virus particle
Descriptor: major envelope protein E
Authors:Zhang, Y, Corver, J, Chipman, P.R, Lenches, E, Zhang, W, Pletnev, S.V, Sedlak, D, Baker, T.S, Strauss, J.H, Kuhn, R.J, Rossmann, M.G.
Deposit date:2002-11-26
Release date:2003-12-09
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY
Cite:Structures of immature flavivirus particles
EMBO J., 22, 2003
2R69
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BU of 2r69 by Molmil
Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-05
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
3EZK
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BU of 3ezk by Molmil
Bacteriophage T4 gp17 motor assembly based on crystal structures and cryo-EM reconstructions
Descriptor: DNA packaging protein Gp17
Authors:Sun, S, Rossmann, M.G.
Deposit date:2008-10-23
Release date:2009-01-13
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (34 Å)
Cite:The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.
Cell(Cambridge,Mass.), 135, 2008
3C6A
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BU of 3c6a by Molmil
Crystal Structure of the RB49 gp17 nuclease domain
Descriptor: MAGNESIUM ION, Terminase large subunit
Authors:Sun, S, Rossmann, M.G.
Deposit date:2008-02-04
Release date:2009-01-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.16 Å)
Cite:The structure of the phage T4 DNA packaging motor suggests a mechanism dependent on electrostatic forces.
Cell(Cambridge,Mass.), 135, 2008
3SPE
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BU of 3spe by Molmil
Crystal structure of the tail sheath protein protease resistant fragment from bacteriophage phiKZ
Descriptor: GLYCEROL, PHIKZ029, PHOSPHATE ION
Authors:Aksyuk, A.A, Kurochkina, L.P, Fokine, A, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:2011-07-01
Release date:2011-12-14
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.3996 Å)
Cite:Structural conservation of the myoviridae phage tail sheath protein fold.
Structure, 19, 2011
4MGU
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BU of 4mgu by Molmil
Crystal structure of Acheta domesticus Densovirus
Descriptor: DNA (5'-D(P*TP*TP*T)-3'), Structural protein VP2
Authors:Meng, G, Rossmann, M.G.
Deposit date:2013-08-28
Release date:2013-10-30
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:The structure and host entry of an invertebrate parvovirus.
J.Virol., 87, 2013
2QZD
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BU of 2qzd by Molmil
Fitted structure of SCR4 of DAF into cryoEM density
Descriptor: Complement decay-accelerating factor
Authors:Hafenstein, S, Bowman, V.D, Chipman, P.R, Bator Kelly, C.M, Lin, F, Medof, M.E, Rossmann, M.G.
Deposit date:2007-08-16
Release date:2007-10-30
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (14 Å)
Cite:Interaction of decay-accelerating factor with coxsackievirus b3.
J.Virol., 81, 2007
2R6P
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BU of 2r6p by Molmil
Fit of E protein and Fab 1A1D-2 into 24 angstrom resolution cryoEM map of Fab complexed with dengue 2 virus.
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-06
Release date:2007-12-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
1IAM
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BU of 1iam by Molmil
STRUCTURE OF THE TWO AMINO-TERMINAL DOMAINS OF HUMAN INTERCELLULAR ADHESION MOLECULE-1, ICAM-1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, INTERCELLULAR ADHESION MOLECULE-1
Authors:Bella, J, Kolatkar, P.R, Marlor, C, Greve, J.M, Rossmann, M.G.
Deposit date:1998-02-22
Release date:1998-04-29
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The structure of the two amino-terminal domains of human ICAM-1 suggests how it functions as a rhinovirus receptor and as an LFA-1 integrin ligand.
Proc.Natl.Acad.Sci.USA, 95, 1998
1JNB
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BU of 1jnb by Molmil
CONNECTOR PROTEIN FROM BACTERIOPHAGE PHI29
Descriptor: UPPER COLLAR PROTEIN
Authors:Simpson, A.A, Leiman, P.G, Tao, Y, He, Y, Badasso, M.O, Jardine, P.J, Anderson, D.L, Rossmann, M.G.
Deposit date:2001-07-23
Release date:2001-08-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure determination of the head-tail connector of bacteriophage phi29.
Acta Crystallogr.,Sect.D, 57, 2001
3SUC
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BU of 3suc by Molmil
Crystal structure of the pre-mature bacteriophage phi29 gene product 12
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, MAGNESIUM ION, ...
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2011-07-11
Release date:2011-08-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystallographic Insights Into the Autocatalytic Assembly Mechanism of a Bacteriophage Tail Spike
Mol.Cell, 34, 2009
3TXS
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BU of 3txs by Molmil
Crystal Structure of phage 44RR small terminase gp16
Descriptor: Terminase DNA packaging enzyme small subunit
Authors:Sun, S, Xiang, Y, Rossmann, M.G.
Deposit date:2011-09-23
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Structure and function of the small terminase component of the DNA packaging machine in T4-like bacteriophages.
Proc.Natl.Acad.Sci.USA, 109, 2012
1M06
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BU of 1m06 by Molmil
Structural Studies of Bacteriophage alpha3 Assembly, X-Ray Crystallography
Descriptor: 5'-D(P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR)P*(3DR))-3', Capsid Protein, Major spike protein, ...
Authors:Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1M0F
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BU of 1m0f by Molmil
Structural Studies of Bacteriophage alpha3 Assembly, Cryo-electron microscopy
Descriptor: Capsid Protein F, Major Spike Protein G, Scaffolding Protein B, ...
Authors:Bernal, R.A, Hafenstein, S, Olson, N.H, Bowman, V.D, Chipman, P.R, Baker, T.S, Fane, B.A, Rossmann, M.G.
Deposit date:2002-06-12
Release date:2002-12-25
Last modified:2024-04-17
Method:ELECTRON MICROSCOPY (16 Å)
Cite:Structural Studies of Bacteriophage alpha3 Assembly
J.Mol.Biol., 325, 2003
1THD
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BU of 1thd by Molmil
COMPLEX ORGANIZATION OF DENGUE VIRUS E PROTEIN AS REVEALED BY 9.5 ANGSTROM CRYO-EM RECONSTRUCTION
Descriptor: Major envelope protein E
Authors:Zhang, Y, Zhang, W, Ogata, S, Clements, D, Strauss, J.H, Baker, T.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2004-06-01
Release date:2004-09-28
Last modified:2024-02-14
Method:ELECTRON MICROSCOPY (9.5 Å)
Cite:Conformational changes of the flavivirus e glycoprotein
Structure, 12, 2004
3QC7
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BU of 3qc7 by Molmil
The structure of bacteriophage phi29 head fibers has a supercoiled triple repeating helix-turn-helix motif
Descriptor: Head fiber protein
Authors:Xiang, Y, Rossmann, M.G.
Deposit date:2011-01-15
Release date:2011-01-26
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure of bacteriophage {phi}29 head fibers has a supercoiled triple repeating helix-turn-helix motif.
Proc.Natl.Acad.Sci.USA, 108, 2011
1TX9
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BU of 1tx9 by Molmil
gpd prior to capsid assembly
Descriptor: Scaffolding protein D
Authors:Morais, M.C, Fisher, M, Kanamaru, K, Fane, B.A, Rossmann, M.G.
Deposit date:2004-06-24
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (3.31 Å)
Cite:Conformational switching by the scaffolding protein D directs the assembly of bacteriophage phiX174
Mol.Cell, 15, 2004
1K4R
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BU of 1k4r by Molmil
Structure of Dengue Virus
Descriptor: MAJOR ENVELOPE PROTEIN E
Authors:Kuhn, R.J, Zhang, W, Rossmann, M.G, Pletnev, S.V, Corver, J, Lenches, E, Jones, C.T, Mukhopadhyay, S, Chipman, P.R, Strauss, E.G, Baker, T.S, Strauss, J.H.
Deposit date:2001-10-08
Release date:2002-03-13
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Structure of dengue virus: implications for flavivirus organization, maturation, and fusion.
Cell(Cambridge,Mass.), 108, 2002
1IHM
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BU of 1ihm by Molmil
CRYSTAL STRUCTURE ANALYSIS OF NORWALK VIRUS CAPSID
Descriptor: capsid protein
Authors:Prasad, B.V, Hardy, M.E, Dokland, T, Bella, J, Rossmann, M.G, Estes, M.K.
Deposit date:2001-04-19
Release date:2001-05-16
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:X-ray crystallographic structure of the Norwalk virus capsid
Science, 286, 1999
1QEX
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BU of 1qex by Molmil
BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9), THE TRIGGER OF TAIL CONTRACTION AND THE LONG TAIL FIBERS CONNECTOR
Descriptor: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, PROTEIN (BACTERIOPHAGE T4 GENE PRODUCT 9 (GP9))
Authors:Kostyuchenko, V.A, Navruzbekov, G.A, Kurochkina, L.P, Strelkov, S.V, Mesyanzhinov, V.V, Rossmann, M.G.
Deposit date:1999-03-30
Release date:1999-10-05
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure of bacteriophage T4 gene product 9: the trigger for tail contraction.
Structure Fold.Des., 7, 1999
1S49
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Crystal Structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from bovine viral diarrhea virus complexed with GTP
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-15
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S48
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Crystal structure of RNA-dependent RNA polymerase construct 1 (residues 71-679) from BVDV
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-15
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
1S4F
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Crystal Structure of RNA-dependent RNA polymerase construct 2 from bovine viral diarrhea virus (BVDV)
Descriptor: RNA-dependent RNA polymerase
Authors:Choi, K.H, Groarke, J.M, Young, D.C, Kuhn, R.J, Smith, J.L, Pevear, D.C, Rossmann, M.G.
Deposit date:2004-01-16
Release date:2004-04-06
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the RNA-dependent RNA polymerase from bovine viral diarrhea virus establishes the role of GTP in de novo initiation.
Proc.Natl.Acad.Sci.Usa, 101, 2004

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