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PDB: 634 results

5JUP
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BU of 5jup by Molmil
Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)
Descriptor: 18S ribosomal RNA, 25S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Abeyrathne, P, Koh, C.S, Grant, T, Grigorieff, N, Korostelev, A.A.
Deposit date:2016-05-10
Release date:2016-10-05
Last modified:2019-11-27
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Ensemble cryo-EM uncovers inchworm-like translocation of a viral IRES through the ribosome.
Elife, 5, 2016
5EPM
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BU of 5epm by Molmil
Ceratotoxin variant in complex with specific antibody Fab fragment
Descriptor: Antibody Fab fragment heavy chain, Antibody Fab fragment light chain, Beta-theraphotoxin-Cm1a
Authors:Strop, P, Shcherbatko, A, Rossi, A.
Deposit date:2015-11-11
Release date:2016-05-04
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Engineering Highly Potent and Selective Microproteins against Nav1.7 Sodium Channel for Treatment of Pain.
J.Biol.Chem., 291, 2016
1R65
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BU of 1r65 by Molmil
Crystal structure of ferrous soaked Ribonucleotide Reductase R2 subunit (wildtype) at pH 5 from E. coli
Descriptor: FE (II) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Voegtli, W.C, Sommerhalter, M, Saleh, L, Baldwin, J, Bollinger Jr, J.M, Rosenzweig, A.C.
Deposit date:2003-10-14
Release date:2004-01-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
2B8E
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BU of 2b8e by Molmil
CopA ATP Binding Domain
Descriptor: cation-transporting ATPase
Authors:Sazinsky, M.H, Mandal, A.K, Arguello, J.M, Rosenzweig, A.C.
Deposit date:2005-10-06
Release date:2006-01-03
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the ATP binding domain from the Archaeoglobus fulgidus Cu+-ATPase.
J.Biol.Chem., 281, 2006
1PM2
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BU of 1pm2 by Molmil
CRYSTAL STRUCTURE OF MANGANESE SUBSTITUTED R2-D84E (D84E MUTANT OF THE R2 SUBUNIT OF E. COLI RIBONUCLEOTIDE REDUCTASE)
Descriptor: MANGANESE (II) ION, MERCURY (II) ION, Ribonucleoside-diphosphate reductase 1 beta chain
Authors:Voegtli, W.C, Sommerhalter, M, Baldwin, J, Saleh, L, Bollinger Jr, J.M, Rosenzweig, A.C.
Deposit date:2003-06-09
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Variable coordination geometries at the diiron(II) active site of ribonucleotide reductase R2.
J.Am.Chem.Soc., 125, 2003
5TWK
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BU of 5twk by Molmil
Crystal Structure of RlmH in Complex with Sinefungin
Descriptor: Ribosomal RNA large subunit methyltransferase H, SINEFUNGIN
Authors:Koh, C.S, Madireddy, R, Beane, T.J, Zamore, P.D, Korostelev, A.A.
Deposit date:2016-11-14
Release date:2017-05-03
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small methyltransferase RlmH assembles a composite active site to methylate a ribosomal pseudouridine.
Sci Rep, 7, 2017
6DNC
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BU of 6dnc by Molmil
E.coli RF1 bound to E.coli 70S ribosome in response to UAU sense A-site codon
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Svidritskiy, E, Demo, G, Korostelev, A.A.
Deposit date:2018-06-06
Release date:2018-07-04
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Mechanism of premature translation termination on a sense codon.
J. Biol. Chem., 293, 2018
5ELG
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BU of 5elg by Molmil
The structure of DHAR1 from Arabidopsis thaliana
Descriptor: GLUTATHIONE, GLYCEROL, Glutathione S-transferase DHAR1, ...
Authors:Menault, M, Roszak, A.W, Lapthorn, A.J.
Deposit date:2015-11-04
Release date:2016-11-16
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Arabidopsis thaliana DHAR1 apo structure
To Be Published
5IN7
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BU of 5in7 by Molmil
X-RAY STRUCTURE OF THE N-TERMINAL DOMAIN OF HUMAN DOUBLECORTIN
Descriptor: Neuronal migration protein doublecortin
Authors:Ruf, A, Benz, J, Burger, D, D'Arcy, B, Debulpaep, M, Di Lello, P, Fry, D, Huber, W, Kremer, T, Laeremans, T, Matile, H, Ross, A, Rudolph, M.G, Rufer, A.C, Sharma, A, Steinmetz, M.O, Steyaert, J, Schoch, G, Stihle, M, Thoma, R.
Deposit date:2016-03-07
Release date:2016-03-23
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal Structures of the Human Doublecortin C- and N-terminal Domains in Complex with Specific Antibodies.
J.Biol.Chem., 291, 2016
1YJU
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BU of 1yju by Molmil
Solution structure of the apo form of the sixth soluble domain of Menkes protein
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Migliardi, M, Rosato, A, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-15
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A
J.Mol.Biol., 352, 2005
1YJR
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BU of 1yjr by Molmil
Solution structure of the apo form of the sixth soluble domain A69P mutant of Menkes protein
Descriptor: Copper-transporting ATPase 1
Authors:Banci, L, Bertini, I, Cantini, F, Migliardi, M, Rosato, A, Wang, S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-01-15
Release date:2006-01-03
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:An atomic-level investigation of the disease-causing A629P mutant of the Menkes protein, ATP7A
J.Mol.Biol., 352, 2005
3RFA
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BU of 3rfa by Molmil
X-ray structure of RlmN from Escherichia coli in complex with S-adenosylmethionine
Descriptor: IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N, S-ADENOSYLMETHIONINE
Authors:Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
Deposit date:2011-04-05
Release date:2011-05-11
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
1Q19
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BU of 1q19 by Molmil
Carbapenam Synthetase
Descriptor: (2S,5S)-5-CARBOXYMETHYLPROLINE, CarA, DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, ...
Authors:Miller, M.T, Gerratana, B, Stapon, A, Townsend, C.A, Rosenzweig, A.C.
Deposit date:2003-07-18
Release date:2003-11-04
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of Carbapenam Synthetase (CarA)
J.Biol.Chem., 278, 2003
2WK0
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BU of 2wk0 by Molmil
Crystal structure of the class A beta-lactamase BS3 inhibited by 6- beta-iodopenicillanate.
Descriptor: (3S)-2,2-dimethyl-3,4-dihydro-2H-1,4-thiazine-3,6-dicarboxylic acid, BETA-LACTAMASE, CHLORIDE ION, ...
Authors:Sauvage, E, Zervosen, A, Dive, G, Herman, R, Kerff, F, Amoroso, A, Fonze, E, Pratt, R.F, Luxen, A, Charlier, P.
Deposit date:2009-06-03
Release date:2009-12-01
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural Basis of the Inhibition of Class a Beta-Lactamases and Penicillin-Binding Proteins by 6-Beta-Iodopenicillanate.
J.Am.Chem.Soc., 131, 2009
3RFR
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BU of 3rfr by Molmil
Crystal Structure of particulate methane monooxygenase (pMMO) from Methylocystis sp. strain M
Descriptor: COPPER (II) ION, DINUCLEAR COPPER ION, PmoA, ...
Authors:Smith, S.M, Rosenzweig, A.C.
Deposit date:2011-04-06
Release date:2011-11-23
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Crystal Structure and Characterization of Particulate Methane Monooxygenase from Methylocystis species Strain M.
Biochemistry, 50, 2011
3RF9
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BU of 3rf9 by Molmil
X-ray structure of RlmN from Escherichia coli
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, IRON/SULFUR CLUSTER, Ribosomal RNA large subunit methyltransferase N
Authors:Boal, A.K, Grove, T.L, McLaughlin, M.I, Yennawar, N, Booker, S.J, Rosenzweig, A.C.
Deposit date:2011-04-05
Release date:2011-05-11
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for methyl transfer by a radical SAM enzyme.
Science, 332, 2011
1NOF
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BU of 1nof by Molmil
THE FIRST CRYSTALLOGRAPHIC STRUCTURE OF A XYLANASE FROM GLYCOSYL HYDROLASE FAMILY 5: IMPLICATIONS FOR CATALYSIS
Descriptor: ACETATE ION, xylanase
Authors:Larson, S.B, Day, J, McPherson, A, Barba De La Rosa, A.P, Keen, N.T.
Deposit date:2003-01-16
Release date:2003-09-16
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:First crystallographic structure of a xylanase from glycoside hydrolase family 5: implications for catalysis.
Biochemistry, 42, 2003
4PI0
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BU of 4pi0 by Molmil
Crystal structure of particulate methane monooxygenase from Methylocystis sp. ATCC 49242 (Rockwell) soaked in copper
Descriptor: COPPER (II) ION, Particulate methane monooxygenase subunit A, Particulate methane monooxygenase subunit B, ...
Authors:Sirajuddin, S, Rosenzweig, A.C.
Deposit date:2014-05-07
Release date:2014-06-25
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Effects of zinc on particulate methane monooxygenase activity and structure.
J.Biol.Chem., 289, 2014
2B7K
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BU of 2b7k by Molmil
Crystal Structure of Yeast Sco1
Descriptor: PLATINUM (II) ION, SCO1 protein
Authors:Abajian, C, Rosenzweig, A.C.
Deposit date:2005-10-04
Release date:2006-04-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of yeast Sco1.
J.Biol.Inorg.Chem., 11, 2006
5WP9
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BU of 5wp9 by Molmil
Structural Basis of Mitochondrial Receptor Binding and Constriction by Dynamin-Related Protein 1
Descriptor: Dynamin-1-like protein, MAGNESIUM ION, Mitochondrial dynamics protein MID49, ...
Authors:Kalia, R, Wang, R.Y.R, Yusuf, A, Thomas, P.V, Agard, D.A, Shaw, J.M, Frost, A.
Deposit date:2017-08-03
Release date:2018-06-20
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (4.22 Å)
Cite:Structural basis of mitochondrial receptor binding and constriction by DRP1.
Nature, 558, 2018
1URK
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BU of 1urk by Molmil
SOLUTION STRUCTURE OF THE AMINO TERMINAL FRAGMENT OF UROKINASE-TYPE PLASMINOGEN ACTIVATOR
Descriptor: PLASMINOGEN ACTIVATOR, alpha-L-fucopyranose
Authors:Hansen, A.P, Petros, A.M, Meadows, R.P, Nettesheim, D.G, Mazar, A.P, Olejniczak, E.T, Xu, R.X, Pederson, T.M, Henkin, J, Fesik, S.W.
Deposit date:1994-01-10
Release date:1995-05-08
Last modified:2024-10-23
Method:SOLUTION NMR
Cite:Solution structure of the amino-terminal fragment of urokinase-type plasminogen activator.
Biochemistry, 33, 1994
2B4J
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BU of 2b4j by Molmil
Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
Descriptor: GLYCEROL, Integrase (IN), PC4 and SFRS1 interacting protein, ...
Authors:Cherepanov, P, Ambrosio, A.L, Rahman, S, Ellenberger, T, Engelman, A.
Deposit date:2005-09-24
Release date:2005-10-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structural basis for the recognition between HIV-1 integrase and transcriptional coactivator p75
Proc.Natl.Acad.Sci.Usa, 102, 2005
6AWB
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BU of 6awb by Molmil
Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state
Descriptor: 16S rRNA, 30S ribosomal protein S1, 30S ribosomal protein S10, ...
Authors:Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A.
Deposit date:2017-09-05
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (6.7 Å)
Cite:Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017
3RJ6
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BU of 3rj6 by Molmil
Crystal Structure of Horse heart ferric myoglobin; K45E/K63E/K96E mutant
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Smith, S.M, Rosenzweig, A.C.
Deposit date:2011-04-15
Release date:2012-05-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.23 Å)
Cite:Charge-Disproportionation Symmetry Breaking Creates a Heterodimeric Myoglobin Complex with Enhanced Affinity and Rapid Intracomplex Electron Transfer.
J.Am.Chem.Soc., 138, 2016
6AWD
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BU of 6awd by Molmil
Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Demo, G, Rasouly, A, Vasilyev, N, Loveland, A.B, Diaz-Avalos, R, Grigorieff, N, Nudler, E, Korostelev, A.A.
Deposit date:2017-09-05
Release date:2017-10-18
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:Structure of RNA polymerase bound to ribosomal 30S subunit.
Elife, 6, 2017

226707

数据于2024-10-30公开中

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