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PDB: 266 results

1I3W
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ACTINOMYCIN D BINDING TO CGATCGATCG
Descriptor: 5'-D(*C*GP*AP*TP*CP*GP*AP*(BRU)P*CP*GP)-3', ACTINOMYCIN D
Authors:Robinson, H, Gao, Y.-G, Yang, X.-L, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:2001-02-17
Release date:2001-05-21
Last modified:2024-07-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystallographic Analysis of a Novel Complex of Actinomycin D Bound to the DNA Decamer Cgatcgatcg.
Biochemistry, 40, 2001
1TNE
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NMR STUDY OF Z-DNA AT PHYSIOLOGICAL SALT CONDITIONS, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*CP*GP*CP*(8MG)P*CP*G)-3')
Authors:Robinson, H, Wang, A.H.-J, Sugiyama, H, Kawai, K, Matsunaga, A, Fujimoto, K, Saito, I.
Deposit date:1996-02-13
Release date:1996-07-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Synthesis, structure and thermodynamic properties of 8-methylguanine-containing oligonucleotides: Z-DNA under physiological salt conditions.
Nucleic Acids Res., 24, 1996
403D
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5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE
Descriptor: 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLE, DNA (5'-D(*CP*GP*CP*(IGU)P*AP*AP*TP*TP*TP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Bauer, C, Roberts, C, Switzer, C, Wang, A.H.-J.
Deposit date:1998-06-10
Release date:1998-07-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:2'-Deoxyisoguanosine adopts more than one tautomer to form base pairs with thymidine observed by high-resolution crystal structure analysis.
Biochemistry, 37, 1998
1DNO
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A-DNA/RNA DODECAMER R(GCG)D(TATACGC) MG BINDING SITES
Descriptor: DNA/RNA (5'-R(*GP*CP*GP)-D(*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
1AMD
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NMR STUDY OF DNA (5'-D(*TP*GP*TP*AP*CP*A)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH A BIS-DAUNORUBICIN WP-652, MINIMIZED AVERAGE STRUCTURE
Descriptor: BIS-DAUNORUBICIN, DNA (5'-D(*TP*GP*TP*AP*CP*A)-3')
Authors:Robinson, H, Wang, A.H.-J.
Deposit date:1997-06-12
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Binding of two novel bisdaunorubicins to DNA studied by NMR spectroscopy.
Biochemistry, 36, 1997
1CC3
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PURPLE CUA CENTER
Descriptor: COPPER (II) ION, PROTEIN (CUA AZURIN)
Authors:Robinson, H, Ang, M.C, Gao, Y.-G, Hay, M.T, Lu, Y, Wang, A.H.-J.
Deposit date:1999-03-03
Release date:1999-12-23
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structural basis of electron transfer modulation in the purple CuA center.
Biochemistry, 38, 1999
1AL9
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NMR STUDY OF DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3') SELF-COMPLEMENTARY DUPLEX COMPLEXED WITH A BIS-DAUNORUBICIN, MINIMIZED AVERAGE STRUCTURE
Descriptor: 4-METHYLBENZYL-N-BIS[DAUNOMYCIN], DNA (5'-D(*AP*CP*GP*TP*AP*CP*GP*T)-3')
Authors:Robinson, H, Wang, A.H.-J.
Deposit date:1997-06-12
Release date:1997-09-17
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Binding of two novel bisdaunorubicins to DNA studied by NMR spectroscopy.
Biochemistry, 36, 1997
1DNZ
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A-DNA DECAMER ACCGGCCGGT WITH MAGNESIUM BINDING SITES
Descriptor: DNA (5'-D(*AP*CP*CP*GP*GP*CP*CP*GP*GP*T)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:1999-12-17
Release date:2000-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
1DNT
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RNA/DNA DODECAMER R(GC)D(GTATACGC) WITH MAGNESIUM BINDING SITES
Descriptor: DNA/RNA (5'-R(*GP*CP)-D(*GP*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
1DNX
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RNA/DNA DODECAMER R(G)D(CGTATACGC) WITH MAGNESIUM BINDING SITES
Descriptor: DNA/RNA (5'-R(*GP)-D(*CP*GP*TP*AP*TP*AP*CP*GP*C)-3'), MAGNESIUM ION
Authors:Robinson, H, Gao, Y.-G, Sanishvili, R, Joachimiak, A, Wang, A.H.-J.
Deposit date:1999-12-16
Release date:2000-04-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Hexahydrated magnesium ions bind in the deep major groove and at the outer mouth of A-form nucleic acid duplexes.
Nucleic Acids Res., 28, 2000
1BHR
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2'-DEOXY-ISOGUANOSINE BASE PAIRED TO THYMIDINE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: DNA (5'-D(*CP*GP*CP*IGUP*AP*AP*TP*TP*TP*GP*CP*G)-3')
Authors:Robinson, H, Gao, Y.-G, Bauer, C, Roberts, C, Switzer, C, Wang, A.H.-J.
Deposit date:1998-06-10
Release date:1998-11-04
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:2'-Deoxyisoguanosine adopts more than one tautomer to form base pairs with thymidine observed by high-resolution crystal structure analysis.
Biochemistry, 37, 1998
1AZQ
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
Descriptor: DNA (5'-D(*GP*TP*AP*AP*TP*TP*AP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
Authors:Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
Deposit date:1997-11-20
Release date:1999-01-13
Last modified:2023-08-02
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998
1AZP
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HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D BOUND WITH KINKED DNA DUPLEX
Descriptor: DNA (5'-D(*GP*CP*GP*AP*TP*CP*GP*C)-3'), PROTEIN (HYPERTHERMOPHILE CHROMOSOMAL PROTEIN SAC7D)
Authors:Robinson, H, Gao, Y.-G, Mccrary, B.S, Edmondson, S.P, Shriver, J.W, Wang, A.H.-J.
Deposit date:1997-11-19
Release date:1999-01-13
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The hyperthermophile chromosomal protein Sac7d sharply kinks DNA.
Nature, 392, 1998
5D6M
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Mn(II)-loaded MnCcP.1
Descriptor: Cytochrome c peroxidase, mitochondrial, MANGANESE (II) ION, ...
Authors:Robinson, H, Gao, Y.-G, Hosseinzadeh, P, Lu, Y.
Deposit date:2015-08-12
Release date:2016-03-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.653 Å)
Cite:Enhancing Mn(II)-Binding and Manganese Peroxidase Activity in a Designed Cytochrome c Peroxidase through Fine-Tuning Secondary-Sphere Interactions.
Biochemistry, 55, 2016
3NJ2
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Crystal structure of cce_0566 from the cyanobacterium Cyanothece 51142, a protein associated with nitrogen fixation from the DUF269 family
Descriptor: DUF269-containing protein
Authors:Robinson, H, Ralston, C.Y, Addlagatta, A, Buchko, G.W.
Deposit date:2010-06-16
Release date:2010-07-07
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Crystal structure of cce_0566 from Cyanothece 51142, a protein associated with nitrogen fixation in the DUF269 family.
Febs Lett., 586, 2012
3V93
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unliganded structure of TcrPDEC1 catalytic domain
Descriptor: Cyclic nucleotide specific phosphodiesterase, MAGNESIUM ION, ZINC ION
Authors:Wang, H, Kunz, S, Chen, G, Seebeck, T, Wan, Y, Robinson, H, Martinelli, S, Ke, H.
Deposit date:2011-12-23
Release date:2012-02-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biological and structural characterization of Trypanosoma cruzi phosphodiesterase C and Implications for design of parasite selective inhibitors.
J.Biol.Chem., 287, 2012
2FZW
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Structure of the binary complex of the E67L mutant of human glutathione-dependent formaldehyde dehydrogenase with NAD(H)
Descriptor: Alcohol dehydrogenase class III chi chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, PHOSPHATE ION, ...
Authors:Sanghani, P.C, Robinson, H.
Deposit date:2006-02-10
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure-function relationships in human glutathione-dependent formaldehyde dehydrogenase. Role of Glu-67 and Arg-368 in the catalytic mechanism.
Biochemistry, 45, 2006
2GBB
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Crystal structure of secreted chorismate mutase from Yersinia pestis
Descriptor: CITRIC ACID, SULFATE ION, putative chorismate mutase
Authors:Ladner, J.E, Reddy, P.T, Nelson, B.C, Robinson, H, Kim, S.-K.
Deposit date:2006-03-10
Release date:2007-04-03
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A comparative biochemical and structural analysis of the intracellular chorismate mutase (Rv0948c) from Mycobacterium tuberculosis H(37)R(v) and the secreted chorismate mutase (y2828) from Yersinia pestis.
Febs J., 275, 2008
4FWY
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F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin) with copper bound
Descriptor: COPPER (II) ION, Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gao, Y.-G, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
Deposit date:2012-07-02
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
2FZE
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Crystal structure of the binary complex of human glutathione-dependent formaldehyde dehydrogenase with ADP-ribose
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, Alcohol dehydrogenase class III chi chain, PHOSPHATE ION, ...
Authors:Sanghani, P.C, Robinson, H.
Deposit date:2006-02-09
Release date:2006-06-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-function relationships in human glutathione-dependent formaldehyde dehydrogenase. Role of Glu-67 and Arg-368 in the catalytic mechanism.
Biochemistry, 45, 2006
4FWX
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Aquoferric F33Y CuB myoglobin (F33Y L29H F43H sperm whale myoglobin)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gao, Y.-G, Stoner-Ma, D, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
Deposit date:2012-07-02
Release date:2012-07-18
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
4FWZ
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Aquoferric CuB myoglobin (L29H F43H sperm whale myoglobin)
Descriptor: Myoglobin, PROTOPORPHYRIN IX CONTAINING FE
Authors:Gao, Y.-G, Robinson, H, Petrik, I.D, Miner, K.D, Lu, Y.
Deposit date:2012-07-02
Release date:2012-07-18
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Designed Functional Metalloenzyme that Reduces O(2) to H(2) O with Over One Thousand Turnovers.
Angew.Chem.Int.Ed.Engl., 51, 2012
3MC0
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Crystal Structure of Staphylococcal Enterotoxin G (SEG) in Complex with a Mouse T-cell Receptor beta Chain
Descriptor: ACETATE ION, Enterotoxin SEG, variable beta 8.2 mouse T cell receptor
Authors:Fernandez, M.M, Cho, S, Robinson, H, Mariuzza, R.A, Malchiodi, E.L.
Deposit date:2010-03-26
Release date:2010-10-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of staphylococcal enterotoxin G (SEG) in complex with a mouse T-cell receptor {beta} chain.
J.Biol.Chem., 286, 2011
2G0Y
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Crystal Structure of a Lumenal Pentapeptide Repeat Protein from Cyanothece sp 51142 at 2.3 Angstrom Resolution. Tetragonal Crystal Form
Descriptor: CALCIUM ION, pentapeptide repeat protein
Authors:Kennedy, M.A, Ni, S, Buchko, G.W, Robinson, H.
Deposit date:2006-02-13
Release date:2006-11-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization of two potentially universal turn motifs that shape the repeated five-residues fold - Crystal structure of a lumenal pentapeptide repeat protein from Cyanothece 51142
Protein Sci., 15, 2006
2RGJ
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Crystal structure of flavin-containing monooxygenase PhzS
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-containing monooxygenase
Authors:Ladner, J.E, Parsons, J.F, Greenhagen, B.T, Robinson, H.
Deposit date:2007-10-03
Release date:2008-05-20
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal Structure of the Pyocyanin Biosynthetic Protein PhzS.
Biochemistry, 47, 2008

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