Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 239 件

1S2P
DownloadVisualize
BU of 1s2p by Molmil
The structure and refinement of apocrustacyanin C2 to 1.3A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, Crustacyanin C2 subunit, SULFATE ION
著者Habash, J, Helliwell, J.R, Raftery, J, Cianci, M, Rizkallah, P.J, Chayen, N.E, NNeji, G.A, Zakalsky, P.F.
登録日2004-01-09
公開日2004-03-02
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献The structure and refinement of apocrustacyanin C2 to 1.3 A resolution and the search for differences between this protein and the homologous apoproteins A1 and C1.
Acta Crystallogr.,Sect.D, 60, 2004
7P5R
DownloadVisualize
BU of 7p5r by Molmil
Racemic protein crystal structure of lacticin Q from Lactococcus lactis
分子名称: D-Lacticin Q, FORMIC ACID, Lacticin Q
著者Lander, A.J, Li, X, Baumann, P, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2021-07-14
公開日2022-07-27
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (0.96 Å)
主引用文献Roles of inter- and intramolecular tryptophan interactions in membrane-active proteins revealed by racemic protein crystallography.
Commun Chem, 6, 2023
6HG6
DownloadVisualize
BU of 6hg6 by Molmil
Clostridium beijerinckii aldo-keto reductase Cbei_3974 with NADPH
分子名称: 1,2-ETHANEDIOL, L-glyceraldehyde 3-phosphate reductase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Scott, A.F, Cresser-Brown, J, Rizkallah, P.J, Jin, Y, Allemann, R.K.
登録日2018-08-22
公開日2019-05-29
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structure and Biophysical Analysis of Furfural-Detoxifying Aldehyde Reductase from Clostridium beijerinckii.
Appl.Environ.Microbiol., 85, 2019
4J88
DownloadVisualize
BU of 4j88 by Molmil
Dark-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 66
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
著者Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
登録日2013-02-14
公開日2013-06-26
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
4J8A
DownloadVisualize
BU of 4j8a by Molmil
Irradiated-state structure of sfGFP containing the unnatural amino acid p-azido-phenylalanine at residue 145
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
著者Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
登録日2013-02-14
公開日2013-05-15
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.26 Å)
主引用文献Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
1FCV
DownloadVisualize
BU of 1fcv by Molmil
CRYSTAL STRUCTURE OF BEE VENOM HYALURONIDASE IN COMPLEX WITH HYALURONIC ACID TETRAMER
分子名称: HYALURONOGLUCOSAMINIDASE, alpha-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-alpha-D-glucopyranuronic acid
著者Markovic-Housley, Z, Miglierini, G, Soldatova, L, Rizkallah, P.J, Mueller, U, Schirmer, T.
登録日2000-07-19
公開日2001-10-01
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Crystal structure of hyaluronidase, a major allergen of bee venom.
Structure Fold.Des., 8, 2000
5NI3
DownloadVisualize
BU of 5ni3 by Molmil
sfGFP 204-204 mutant dimer
分子名称: CHLORIDE ION, GLYCEROL, Green fluorescent protein, ...
著者Worthy, H.L, Rizkallah, P.J.
登録日2017-03-23
公開日2018-09-12
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Association of Fluorescent Protein Pairs and Its Significant Impact on Fluorescence and Energy Transfer
Adv Sci, 2020
4J89
DownloadVisualize
BU of 4j89 by Molmil
Different photochemical events of a genetically encoded aryl azide define and modulate GFP fluorescence
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
著者Reddington, S.C, Jones, D.D, Rizkallah, P.J, Tippmann, E.M.
登録日2013-02-14
公開日2013-06-26
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Different Photochemical Events of a Genetically Encoded Phenyl Azide Define and Modulate GFP Fluorescence.
Angew.Chem.Int.Ed.Engl., 52, 2013
6QU8
DownloadVisualize
BU of 6qu8 by Molmil
Adenovirus Serotype 26 (Ad26) in complex with sialic acid, pH8.0
分子名称: 1,2-ETHANEDIOL, Fiber, N-acetyl-alpha-neuraminic acid, ...
著者Baker, A.T, Rizkallah, P.J, Parker, A.L, Mundy, R.M.
登録日2019-02-26
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Human adenovirus type 26 uses sialic acid-bearing glycans as a primary cell entry receptor.
Sci Adv, 5, 2019
6STU
DownloadVisualize
BU of 6stu by Molmil
Adenovirus 30 Fiber Knob protein
分子名称: 1,2-ETHANEDIOL, Fiber, GLUTAMIC ACID
著者Baker, A.T, Mundy, R.M, Rizkallah, P.J, Parker, A.L.
登録日2019-09-11
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.39 Å)
主引用文献Broad sialic acid usage amongst species D human adenovirus
npj Viruses, 1, 2023
6QU6
DownloadVisualize
BU of 6qu6 by Molmil
Adenovirus Serotype 26 (Ad26) in complex with sialic acid, pH4.0
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Fiber, ...
著者Baker, A.T, Mundy, R.M, Parker, A.L, Rizkallah, P.J.
登録日2019-02-26
公開日2019-09-18
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.03 Å)
主引用文献Human adenovirus type 26 uses sialic acid-bearing glycans as a primary cell entry receptor.
Sci Adv, 5, 2019
4KAG
DownloadVisualize
BU of 4kag by Molmil
Crystal structure analysis of a single amino acid deletion mutation in EGFP
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Green fluorescent protein, ...
著者Arpino, J.A.J, Rizkallah, P.J.
登録日2013-04-22
公開日2014-08-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.
Acta Crystallogr.,Sect.D, 70, 2014
5BS0
DownloadVisualize
BU of 5bs0 by Molmil
MAGE-A3 Reactive TCR in complex with Titin Epitope in HLA-A1
分子名称: Beta-2-microglobulin, GLYCEROL, HLA class I histocompatibility antigen, ...
著者Raman, M.C.C, Rizkallah, P.J, Simmons, R, Donellan, Z, Dukes, J, Bossi, G, LeProvost, G, Mahon, T, Hickman, E, Lomax, M, Oates, J, Hassan, N, Vuidepot, A, Sami, M, Cole, D.K, Jakobsen, B.K.
登録日2015-06-01
公開日2016-03-02
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Direct molecular mimicry enables off-target cardiovascular toxicity by an enhanced affinity TCR designed for cancer immunotherapy.
Sci Rep, 6, 2016
5BRZ
DownloadVisualize
BU of 5brz by Molmil
MAGE-A3 reactive TCR in complex with MAGE-A3 in HLA-A1
分子名称: Beta-2-microglobulin, GLU-VAL-ASP-PRO-ILE-GLY-HIS-LEU-TYR, HLA class I histocompatibility antigen, ...
著者Raman, M.C.C, Rizkallah, P.J, Simmons, R, Donnellan, Z, Dukes, J, Bossi, G, LeProvost, G, Mahon, T, Hickman, E, LomaX, M, Oates, J, Hassan, N, Vuidepot, A, Sami, M, Cole, D.K, Jakobsen, B.K.
登録日2015-06-01
公開日2016-03-02
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.62 Å)
主引用文献Direct molecular mimicry enables off-target cardiovascular toxicity by an enhanced affinity TCR designed for cancer immunotherapy.
Sci Rep, 6, 2016
4KA9
DownloadVisualize
BU of 4ka9 by Molmil
Crystal structure analysis of single amino acid deletion mutations in EGFP
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Green fluorescent protein, ...
著者Arpino, J.A.J, Rizkallah, P.J.
登録日2013-04-22
公開日2014-05-07
最終更新日2015-11-25
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Random single amino acid deletion sampling unveils structural tolerance and the benefits of helical registry shift on GFP folding and structure.
Structure, 22, 2014
5NHN
DownloadVisualize
BU of 5nhn by Molmil
Super-Folder Green Fluorescent Protein Artificiall dimer linked via 148 position
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Green fluorescent protein, ...
著者Worthy, H.L, Rizkallah, P.J.
登録日2017-03-22
公開日2018-09-26
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Positive functional synergy of structurally integrated artificial protein dimers assembled by Click chemistry
Commun Chem, 2019
5BTT
DownloadVisualize
BU of 5btt by Molmil
Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position.
分子名称: GLYCEROL, Green fluorescent protein, SULFATE ION
著者Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D.
登録日2015-06-03
公開日2016-07-13
最終更新日2017-05-10
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016
6QZD
DownloadVisualize
BU of 6qzd by Molmil
HLA-DR1 with SGP Influenza Matrix Peptide
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Greenshields-Watson, A, Rizkallah, P.J.
登録日2019-03-11
公開日2020-07-15
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献CD4+T Cells Recognize Conserved Influenza A Epitopes through Shared Patterns of V-Gene Usage and Complementary Biochemical Features.
Cell Rep, 32, 2020
4KEX
DownloadVisualize
BU of 4kex by Molmil
Crystal structure analysis of a single amino acid deletion mutation in EGFP
分子名称: Green fluorescent protein
著者Arpino, J.A.J, Rizkallah, P.J.
登録日2013-04-26
公開日2014-08-06
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural and dynamic changes associated with beneficial engineered single-amino-acid deletion mutations in enhanced green fluorescent protein.
Acta Crystallogr.,Sect.D, 70, 2014
7NLV
DownloadVisualize
BU of 7nlv by Molmil
WILDTYPE CORE-STREPTAVIDIN WITH a conjugated BIOTINYLATED PYRROLIDINE II
分子名称: 5-((3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl)-N-((S)-pyrrolidin-3-yl)pentanamide, Streptavidin
著者Nodling, A.R, Santi, N, Tsai, Y.H, Rizkallah, P, Luk, L.Y.P, Jin, Y.
登録日2021-02-22
公開日2022-03-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献The role of streptavidin and its variants in catalysis by biotinylated secondary amines.
Org.Biomol.Chem., 19, 2021
5D69
DownloadVisualize
BU of 5d69 by Molmil
Human calpain PEF(S) with (2Z,2Z')-2,2'-disulfanediylbis(3-(6-iodoindol-3-yl)acrylic acid) bound
分子名称: (2E,2'Z)-2,2'-disulfanediylbis[3-(4-iodophenyl)prop-2-enoic acid], CALCIUM ION, Calpain small subunit 1, ...
著者Adams, S.E, Robinson, E.J, Rizkallah, P.J, Miller, D.J, Hallett, M.B, Allemann, R.K.
登録日2015-08-11
公開日2015-09-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Conformationally restricted calpain inhibitors.
Chem Sci, 6, 2015
6STV
DownloadVisualize
BU of 6stv by Molmil
Adenovirus 29 Fiber Knob protein
分子名称: Fiber, GLYCEROL, PHOSPHATE ION
著者Mundy, R.M, Baker, A.T, Rizkallah, P.J, Parker, A.L.
登録日2019-09-11
公開日2021-03-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Broad sialic acid usage amongst species D human adenovirus
npj Viruses, 1, 2023
5BT0
DownloadVisualize
BU of 5bt0 by Molmil
Switching GFP fluorescence using genetically encoded phenyl azide chemistry through two different non-native post-translational modifications routes at the same position.
分子名称: Green fluorescent protein, SULFATE ION
著者Hartley, A.M, Worthy, H.L, Reddington, S.C, Rizkallah, P.J, Jones, D.D.
登録日2015-06-02
公開日2016-07-13
最終更新日2017-05-10
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016
5DY6
DownloadVisualize
BU of 5dy6 by Molmil
Enhanced superfolder GFP with DBCO at 148
分子名称: Green fluorescent protein, SULFATE ION
著者Jones, D.D, Rizkallah, P.J, Worthy, H.L.
登録日2015-09-24
公開日2016-07-13
最終更新日2018-05-30
実験手法X-RAY DIFFRACTION (2.66 Å)
主引用文献Molecular basis for functional switching of GFP by two disparate non-native post-translational modifications of a phenyl azide reaction handle.
Chem Sci, 7, 2016
6QPM
DownloadVisualize
BU of 6qpm by Molmil
Adenovirus serotype 10 Fiber-Knob
分子名称: Fiber protein
著者Baker, A.T, Rizkallah, P.J.
登録日2019-02-14
公開日2020-08-26
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (3.39 Å)
主引用文献Development of a low-seroprevalence, alpha v beta 6 integrin-selective virotherapy based on human adenovirus type 10.
Mol Ther Oncolytics, 25, 2022

224931

件を2024-09-11に公開中

PDB statisticsPDBj update infoContact PDBjnumon