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PDB: 42 results

1LM3
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A Multi-generation Analysis of Cytochrome b562 Redox Variants: Evolutionary Strategies for Modulating Redox Potential Revealed Using a Library Approach
Descriptor: MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, SOLUBLE CYTOCHROME B562
Authors:Springs, S.L, Bass, S.E, Bowman, G, Nodelman, I, Schutt, C.E, McLendon, G.L.
Deposit date:2002-04-30
Release date:2002-05-15
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A multigeneration analysis of cytochrome b(562) redox variants: evolutionary strategies for modulating redox potential revealed using a library approach.
Biochemistry, 41, 2002
3HLX
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Crystal Structure of PqqC Active Site Mutant Y175F in Complex with PQQ
Descriptor: CHLORIDE ION, GLYCEROL, PYRROLOQUINOLINE QUINONE, ...
Authors:Puehringer, S, Schwarzenbacher, R.
Deposit date:2009-05-28
Release date:2010-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structural studies of mutant forms of the PQQ-forming enzyme PqqC in the presence of product and substrate
Proteins, 78, 2010
3HNH
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Crystal Structure of PqqC Active Site Mutant Y175S,R179S in complex with a reaction intermediate
Descriptor: (2S,7R,9R)-4,5-dihydroxy-2,3,6,7,8,9-hexahydro-1H-pyrrolo[2,3-f]quinoline-2,7,9-tricarboxylic acid, Pyrroloquinoline-quinone synthase
Authors:Puehringer, S, Schwarzenbacher, R.
Deposit date:2009-05-31
Release date:2010-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural studies of mutant forms of the PQQ-forming enzyme PqqC in the presence of product and substrate
Proteins, 78, 2010
3HML
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Crystal Structure of PqqC Active Site Mutant H154S in Complex with PQQ
Descriptor: PYRROLOQUINOLINE QUINONE, Pyrroloquinoline-quinone synthase
Authors:Puehringer, S, Schwarzenbacher, R.
Deposit date:2009-05-29
Release date:2010-05-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural studies of mutant forms of the PQQ-forming enzyme PqqC in the presence of product and substrate
Proteins, 78, 2010
8ATL
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Discovery of IRAK4 Inhibitor 23
Descriptor: Interleukin-1 receptor-associated kinase 4, ~{N}-[6-methoxy-2-(2-morpholin-4-yl-2-oxidanylidene-ethyl)indazol-5-yl]-6-[(1~{R})-2,2,2-tris(fluoranyl)-1-oxidanyl-ethyl]pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-08-23
Release date:2023-09-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.464 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8ATB
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Discovery of IRAK4 Inhibitor 16
Descriptor: GLYCEROL, Interleukin-1 receptor-associated kinase 4, ~{N}-[6-ethoxy-2-[2-(4-methylpiperazin-1-yl)-2-oxidanylidene-ethyl]indazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-08-22
Release date:2023-11-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8BR6
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Discovery of IRAK4 Inhibitor 40
Descriptor: ACETATE ION, Interleukin-1 receptor-associated kinase 4, ~{N}-[6-methoxy-2-(2-methylsulfonylethyl)-1,3-dihydroindazol-5-yl]-6-(2-oxidanylpropan-2-yl)pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wengner, A.M, Guimond, N, Thaler, T, Platzek, J, Ewerspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-11-22
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.167 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8ATN
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Discovery of IRAK4 Inhibitor 38
Descriptor: Interleukin-1 receptor-associated kinase 4, ~{N}-[3-methyl-2-(3-methyl-3-oxidanyl-butyl)-6-(2-oxidanylpropan-2-yl)benzimidazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-08-23
Release date:2023-09-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.171 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8BR5
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Discovery of IRAK4 Inhibitor 41
Descriptor: Interleukin-1 receptor-associated kinase 4, ~{N}-[2,3-dimethyl-6-(1~{H}-pyrazol-5-yl)benzimidazol-5-yl]-6-(trifluoromethyl)pyridine-2-carboxamide
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-11-22
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
8BR7
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Discovery of IRAK4 Inhibitors BAY1834845 and BAY1830839
Descriptor: 3-nitro-~{N}-[2-[2-oxidanylidene-2-[4-(phenylcarbonyl)piperazin-1-yl]ethyl]indazol-5-yl]benzamide, Interleukin-1 receptor-associated kinase 4
Authors:Schafer, M, Bothe, U, Schmidt, N, Gunther, J, Nubbemeyer, R, Siebeneicher, H, Ring, S, Boemer, U, Peters, M, Denner, K, Himmel, H, Sutter, A, Terebesi, I, Lange, M, Wenger, A.M, Guimond, N, Thaler, T, Platzek, J, Eberspaecher, U, Steuber, H, Steinmeyer, A, Zollner, T.M.
Deposit date:2022-11-22
Release date:2024-01-31
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.119 Å)
Cite:Discovery of IRAK4 Inhibitors BAY1834845 (Zabedosertib) and BAY1830839 .
J.Med.Chem., 67, 2024
6TDQ
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Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GM dipeptide in the A pocket and one GM dipeptide in the F pocket.
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Anjanappa, R, Garcia Alai, M, Springer, S, Meijers, R.
Deposit date:2019-11-10
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection.
Nat Commun, 11, 2020
6TDS
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Crystal structure of the disulfide engineered HLA-A0201 molecule without peptide bound after NaCl wash
Descriptor: 1,2-ETHANEDIOL, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Anjanappa, R, Garcia Alai, M, Springer, S, Meijers, R.
Deposit date:2019-11-10
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection.
Nat Commun, 11, 2020
6TDO
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Crystal structure of the disulfide engineered HLA-A0201 molecule in complex with one GM dipeptide in the A pocket.
Descriptor: Beta-2-microglobulin, GLYCEROL, GLYCINE, ...
Authors:Anjanappa, R, Garcia Alai, M, Springer, S, Meijers, R.
Deposit date:2019-11-09
Release date:2020-03-25
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Structures of peptide-free and partially loaded MHC class I molecules reveal mechanisms of peptide selection.
Nat Commun, 11, 2020
1BZK
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BU of 1bzk by Molmil
STRUCTURAL STUDIES ON THE EFFECTS OF THE DELETION IN THE RED CELL ANION EXCHANGER (BAND3, AE1) ASSOCIATED WITH SOUTH EAST ASIAN OVALOCYTOSIS.
Descriptor: PROTEIN (BAND 3 ANION TRANSPORT PROTEIN)
Authors:Chambers, E.J, Bloomberg, G.B, Ring, S.M, Tanner, M.J.A.
Deposit date:1998-11-01
Release date:1999-06-01
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Structural studies on the effects of the deletion in the red cell anion exchanger (band 3, AE1) associated with South East Asian ovalocytosis.
J.Mol.Biol., 285, 1999
1BNX
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STRUCTURAL STUDIES ON THE EFFECTS OF THE DELETION IN THE RED CELL ANION EXCHANGER (BAND3, AE1) ASSOCIATED WITH SOUTH EAST ASIAN OVALOCYTOSIS.
Descriptor: PROTEIN (BAND 3)
Authors:Chambers, E.J, Bloomberg, G.B, Ring, S.M, Tanner, M.J.A.
Deposit date:1998-07-30
Release date:1998-08-05
Last modified:2022-02-16
Method:SOLUTION NMR
Cite:Studies on the structure of a transmembrane region and a cytoplasmic loop of the human red cell anion exchanger (band 3, AE1).
Biochem.Soc.Trans., 26, 1998
6Q3S
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Engineered Human HLA_A2 MHC Class I molecule in complex with TCR and SV9 peptide
Descriptor: ACETATE ION, Beta-2-microglobulin, GLYCEROL, ...
Authors:Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
Deposit date:2018-12-04
Release date:2019-07-24
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:High-throughput peptide-MHC complex generation and kinetic screenings of TCRs with peptide-receptive HLA-A*02:01 molecules.
Sci Immunol, 4, 2019
6Q3K
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Engineered Human HLA_A2 MHC Class I molecule in complex with NV9 peptide
Descriptor: ASN-LEU-VAL-PRO-MET-VAL-ALA-THR-VAL, Beta-2-microglobulin, COBALT (II) ION, ...
Authors:Meijers, R, Anjanappa, R, Springer, S, Garcia-Alai, M.
Deposit date:2018-12-04
Release date:2019-07-24
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Engineered Human HLA_A2MHC Class I molecule in complex with NV9 peptide
Sci Immunol, 2019
4NY7
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Bond length analysis of the PqqC Y175F mutant structure shows evidence for bound PQQ in the reduced form
Descriptor: CHLORIDE ION, GLYCEROL, PYRROLOQUINOLINE QUINONE, ...
Authors:Fisher, S.J, Puehringer, S.
Deposit date:2013-12-10
Release date:2015-03-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Bond length analysis of the PqqC Y175F mutant structure shows evidence for bound PQQ in the reduced form
To be Published
1KQS
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The Haloarcula marismortui 50S Complexed with a Pretranslocational Intermediate in Protein Synthesis
Descriptor: 23S RRNA, 5S RRNA, 6-AMINOHEXANOIC ACID, ...
Authors:Schmeing, T.M, Seila, A.C, Hansen, J.L, Freeborn, B, Soukup, J.K, Scaringe, S.A, Strobel, S.A, Moore, P.B, Steitz, T.A.
Deposit date:2002-01-07
Release date:2002-02-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:A pre-translocational intermediate in protein synthesis observed in crystals of enzymatically active 50S subunits.
Nat.Struct.Biol., 9, 2002
4PAC
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BU of 4pac by Molmil
Crystal Structure of Histidine-containing Phosphotransfer Protein AHP2 from Arabidopsis thaliana
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Histidine-containing phosphotransfer protein 2, IMIDAZOLE
Authors:Degtjarik, O, Dopitova, R, Puehringer, S, Weiss, M.S, Janda, L, Hejatko, J, Kuta-Smatanova, I.
Deposit date:2014-04-08
Release date:2015-05-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.53 Å)
Cite:Crystal structure of AHP2 from Arabidopsis thaliana
To Be Published
1KD5
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The Crystal Structure of r(GGUCACAGCCC)2 metal free form
Descriptor: 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3'
Authors:Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P.
Deposit date:2001-11-12
Release date:2003-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
1NZO
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BU of 1nzo by Molmil
The crystal structure of wild type penicillin-binding protein 5 from E. coli
Descriptor: BETA-MERCAPTOETHANOL, Penicillin-binding protein 5
Authors:Nicholas, R.A, Krings, S, Tomberg, J, Nicola, G, Davies, C.
Deposit date:2003-02-19
Release date:2004-01-13
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of wild-type penicillin-binding protein 5 from Escherichia coli: implications for deacylation of the acyl-enzyme complex.
J.Biol.Chem., 278, 2003
1KD3
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The Crystal Structure of r(GGUCACAGCCC)2, Thallium form
Descriptor: 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3', THALLIUM (I) ION
Authors:Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P.
Deposit date:2001-11-12
Release date:2003-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
1KD4
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The Crystal Structure of r(GGUCACAGCCC)2, Barium form
Descriptor: 5'-R(*GP*GP*UP*CP*AP*CP*AP*GP*CP*CP*C)-3', BARIUM ION
Authors:Kacer, V, Scaringe, S.A, Scarsdale, J.N, Rife, J.P.
Deposit date:2001-11-12
Release date:2003-03-04
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of r(GGUCACAGCCC)2.
Acta Crystallogr.,Sect.D, 59, 2003
4EWI
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Crystal structure of the NLRP4 Pyrin domain
Descriptor: CHLORIDE ION, NACHT, LRR and PYD domains-containing protein 4, ...
Authors:Eibl, C, Hessenberger, M, Puehringer, S, Page, R, Diederichs, K, Peti, W.
Deposit date:2012-04-27
Release date:2012-09-05
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structural and Functional Analysis of the NLRP4 Pyrin Domain.
Biochemistry, 51, 2012

 

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