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PDB: 159 results

1RSS
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BU of 1rss by Molmil
RIBOSOMAL PROTEIN S7 FROM THERMUS THERMOPHILUS
Descriptor: RIBOSOMAL PROTEIN S7
Authors:Wimberly, B, White, S, Ramakrishnan, V.
Deposit date:1997-08-05
Release date:1998-02-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The structure of ribosomal protein S7 at 1.9 A resolution reveals a beta-hairpin motif that binds double-stranded nucleic acids.
Structure, 5, 1997
5LZU
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Structure of the mammalian ribosomal termination complex with accommodated eRF1
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.75 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LZS
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Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
Descriptor: (2~{S})-~{N}-[(2~{R})-1-[[(3~{S},6~{S},8~{S},12~{S},13~{R},16~{S},17~{R},20~{S},23~{S})-13-[(2~{S})-butan-2-yl]-20-[(4-methoxyphenyl)methyl]-6,17,21-trimethyl-3-(2-methylpropyl)-12-oxidanyl-2,5,7,10,15,19,22-heptakis(oxidanylidene)-8-propan-2-yl-9,18-dioxa-1,4,14,21-tetrazabicyclo[21.3.0]hexacosan-16-yl]amino]-4-methyl-1-oxidanylidene-pentan-2-yl]-~{N}-methyl-1-[(2~{S})-2-oxidanylpropanoyl]pyrrolidine-2-carboxamide, 18S ribosomal RNA, 28S ribosomal RNA, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.31 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
1K9X
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Structure of Pyrococcus furiosus carboxypeptidase Apo-Yb
Descriptor: M32 carboxypeptidase
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1KA2
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Structure of Pyrococcus furiosus Carboxypeptidase Apo-Mg
Descriptor: M32 carboxypeptidase, MAGNESIUM ION
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
5LZT
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BU of 5lzt by Molmil
Structure of the mammalian ribosomal termination complex with eRF1 and eRF3.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
1KA4
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BU of 1ka4 by Molmil
Structure of Pyrococcus furiosus carboxypeptidase Nat-Pb
Descriptor: LEAD (II) ION, M32 carboxypeptidase
Authors:Arndt, J.W, Hao, B, Ramakrishnan, V, Cheng, T, Chan, S.I, Chan, M.K.
Deposit date:2001-10-31
Release date:2002-11-06
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of a Novel Carboxypeptidase from the Hyperthermophilic Archaeon Pyrococcus furiosus
Structure, 10, 2002
1XNQ
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Structure of an Inosine-Adenine Wobble Base Pair Complex in the Context of the Decoding Center
Descriptor: 16S ribosomal RNA, Anticodon tRNA, MAGNESIUM ION, ...
Authors:Murphy, F.V, Ramakrishnan, V.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
1XMO
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BU of 1xmo by Molmil
Crystal Structure of mnm5U34t6A37-tRNALysUUU Complexed with AAG-mRNA in the Decoding Center
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
1XNR
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BU of 1xnr by Molmil
Crystal Structure of an Inosine-Cytosine Wobble Base Pair in the Context of the Decoding Center
Descriptor: 16S Ribosomal RNA, 16S Ribosomal protein S10, 16S Ribosomal protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V.
Deposit date:2004-10-05
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure of a purine-purine wobble base pair in the decoding center of the ribosome.
Nat.Struct.Mol.Biol., 11, 2004
1XMQ
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BU of 1xmq by Molmil
Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center
Descriptor: 16s ribosomal RNA, 30S Ribosomal Protein S10, 30S Ribosomal Protein S11, ...
Authors:Murphy, F.V, Ramakrishnan, V, Malkiewicz, A, Agris, P.F.
Deposit date:2004-10-04
Release date:2004-12-14
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3 Å)
Cite:The role of modifications in codon discrimination by tRNA(Lys)(UUU).
Nat.Struct.Mol.Biol., 11, 2004
1OJ5
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BU of 1oj5 by Molmil
Crystal structure of the Nco-A1 PAS-B domain bound to the STAT6 transactivation domain LXXLL motif
Descriptor: IODIDE ION, SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 6, STEROID RECEPTOR COACTIVATOR 1A
Authors:Razeto, A, Ramakrishnan, V, Giller, K, Lakomek, N, Carlomagno, T, Griesinger, C, Lodrini, M, Litterst, C.M, Pftizner, E, Becker, S.
Deposit date:2003-07-02
Release date:2004-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Structure of the Ncoa-1/Src-1 Pas-B Domain Bound to the Lxxll Motif of the Stat6 Transactivation Domain
J.Mol.Biol., 336, 2004
1QSM
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BU of 1qsm by Molmil
Histone Acetyltransferase HPA2 from Saccharomyces Cerevisiae in Complex with Acetyl Coenzyme A
Descriptor: ACETYL COENZYME *A, HPA2 HISTONE ACETYLTRANSFERASE
Authors:Angus-Hill, M.L, Dutnall, R.N, Tafrov, S.T, Sternglanz, R, Ramakrishnan, V.
Deposit date:1999-06-22
Release date:1999-12-22
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of the histone acetyltransferase Hpa2: A tetrameric member of the Gcn5-related N-acetyltransferase superfamily.
J.Mol.Biol., 294, 1999
5LMN
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BU of 5lmn by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1A)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2019-10-02
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LZV
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BU of 5lzv by Molmil
Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 5.8S ribosomal RNA, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LZX
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BU of 5lzx by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.67 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5MDW
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BU of 5mdw by Molmil
Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:James, N.R, Brown, A, Gordiyenko, Y, Ramakrishnan, V.
Deposit date:2016-11-13
Release date:2016-12-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.06 Å)
Cite:Translational termination without a stop codon.
Science, 354, 2016
5MDV
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BU of 5mdv by Molmil
Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:James, N.R, Brown, A, Gordiyenko, Y, Ramakrishnan, V.
Deposit date:2016-11-13
Release date:2016-12-14
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.97 Å)
Cite:Translational termination without a stop codon.
Science, 354, 2016
5LZZ
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BU of 5lzz by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LZY
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BU of 5lzy by Molmil
Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.
Descriptor: 18S ribosomal RNA, 28S ribosomal RNA, 40S ribosomal protein S12, ...
Authors:Shao, S, Murray, J, Brown, A, Taunton, J, Ramakrishnan, V, Hegde, R.S.
Deposit date:2016-10-02
Release date:2016-11-30
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.99 Å)
Cite:Decoding Mammalian Ribosome-mRNA States by Translational GTPase Complexes.
Cell, 167, 2016
5LMQ
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BU of 5lmq by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex, open form (state-2A)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMV
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BU of 5lmv by Molmil
Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5LMO
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BU of 5lmo by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA translation pre-initiation complex (state-1B)
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2019-10-02
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
5MDY
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BU of 5mdy by Molmil
Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:James, N.R, Brown, A, Gordiyenko, Y, Ramakrishnan, V.
Deposit date:2016-11-13
Release date:2016-12-21
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (3.35 Å)
Cite:Translational termination without a stop codon.
Science, 354, 2016
5LMT
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BU of 5lmt by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
Deposit date:2016-08-01
Release date:2016-10-05
Last modified:2019-12-11
Method:ELECTRON MICROSCOPY (4.15 Å)
Cite:Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016

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