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PDB: 818 results

7K02
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BU of 7k02 by Molmil
The crystal structure of a BAK dimer activated by detergent
Descriptor: Bcl-2 homologous antagonist/killer
Authors:Birkinshaw, R.W, Czabotar, P.E.
Deposit date:2020-09-02
Release date:2021-03-31
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structure of detergent-activated BAK dimers derived from the inert monomer.
Mol.Cell, 81, 2021
7KD8
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BU of 7kd8 by Molmil
TtgR C137I I141W M167L F168Y mutant in complex with resveratrol
Descriptor: HTH-type transcriptional regulator TtgR, MAGNESIUM ION, RESVERATROL
Authors:Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
Deposit date:2020-10-08
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
7K1A
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BU of 7k1a by Molmil
TtgR quadruple mutant (C137I I141W M167L F168Y)
Descriptor: HTH-type transcriptional regulator TtgR, MAGNESIUM ION
Authors:Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
Deposit date:2020-09-07
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
7K1C
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BU of 7k1c by Molmil
TtgR in complex with resveratrol
Descriptor: HTH-type transcriptional regulator TtgR, MAGNESIUM ION, RESVERATROL
Authors:Bingman, C.A, Nishikawa, K.K, Smith, R.W, Raman, S.
Deposit date:2020-09-07
Release date:2021-10-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Epistasis shapes the fitness landscape of an allosteric specificity switch.
Nat Commun, 12, 2021
5U16
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BU of 5u16 by Molmil
Structure of human MR1-2-OH-1-NA in complex with human MAIT A-F7 TCR
Descriptor: 2-hydroxynaphthalene-1-carbaldehyde, Beta-2-microglobulin, CHLORIDE ION, ...
Authors:Keller, A.N, Birkinshaw, R.W, Rossjohn, J.
Deposit date:2016-11-27
Release date:2017-02-15
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Drugs and drug-like molecules can modulate the function of mucosal-associated invariant T cells.
Nat. Immunol., 18, 2017
5UE6
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BU of 5ue6 by Molmil
Structure of nitrite reductase AniA from Neisseria gonorrhoeae, space group I4122
Descriptor: COPPER (II) ION, Nitrite reductase, SODIUM ION
Authors:Hamza, A, Williamson, Z.A, Reed, R.W, Sikora, A.E, Korotkov, K.V.
Deposit date:2016-12-29
Release date:2017-02-01
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Peptide Inhibitors Targeting the Neisseria gonorrhoeae Pivotal Anaerobic Respiration Factor AniA.
Antimicrob. Agents Chemother., 61, 2017
5V4P
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BU of 5v4p by Molmil
Saccharomyces cerevisiae OYE 3 soaked with p-hydroxybenzaldehyde
Descriptor: 2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXYL, FLAVIN MONONUCLEOTIDE, NADPH dehydrogenase 3, ...
Authors:Stewart, J, Powell III, R.W.
Deposit date:2017-03-10
Release date:2018-03-14
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Saccharomyces cerevisiae OYE 3 soaked with p-hydroxybenzaldehyde
To Be Published
6I6G
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BU of 6i6g by Molmil
Dehaloperoxidase B from Amphitrite ornata - complex with 5-bromoindole
Descriptor: 5-bromanyl-1~{H}-indole, Dehaloperoxidase B, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Moreno-Chicano, T, Ebrahim, A.E, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Sugimoto, H, Tono, K, Owada, S, Duyvesteyn, H.
Deposit date:2018-11-15
Release date:2019-11-20
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:High-throughput structures of protein-ligand complexes at room temperature using serial femtosecond crystallography.
Iucrj, 6, 2019
7O0A
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BU of 7o0a by Molmil
Bdellovibrio bacteriovorus PGI in P1211 spacegroup
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Glucose-6-phosphate isomerase
Authors:Meek, R.W, Lovering, A.L.
Deposit date:2021-03-26
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Bdellovibrio bacteriovorus phosphoglucose isomerase structures reveal novel rigidity in the active site of a selected subset of enzymes upon substrate binding.
Open Biology, 11, 2021
7NTG
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BU of 7ntg by Molmil
Bdellovibrio bacteriovorus PGI in complex with fructose-6-phosphate
Descriptor: 1,2-ETHANEDIOL, FRUCTOSE -6-PHOSPHATE, Glucose-6-phosphate isomerase
Authors:Meek, R.W, Lovering, A.L.
Deposit date:2021-03-09
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Bdellovibrio bacteriovorus phosphoglucose isomerase structures reveal novel rigidity in the active site of a selected subset of enzymes upon substrate binding.
Open Biology, 11, 2021
7NSS
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BU of 7nss by Molmil
Bdellovibrio bacteriovorus PGI in P3121 spacegroup
Descriptor: 1,2-ETHANEDIOL, Glucose-6-phosphate isomerase
Authors:Meek, R.W, Lovering, A.L.
Deposit date:2021-03-08
Release date:2021-08-18
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Bdellovibrio bacteriovorus phosphoglucose isomerase structures reveal novel rigidity in the active site of a selected subset of enzymes upon substrate binding.
Open Biology, 11, 2021
6I7Z
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BU of 6i7z by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 32.8 kGy structure
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
Deposit date:2018-11-19
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
6I8E
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BU of 6i8e by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 65.6 kGy structure
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
Deposit date:2018-11-20
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
6I91
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BU of 6i91 by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 156.8 kGy structure
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
Deposit date:2018-11-22
Release date:2019-12-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Dose-resolved serial synchrotron and XFEL structures of radiation sensitive metalloproteins
To be published
6PJJ
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BU of 6pjj by Molmil
Human PRPF4B bound to benzothiophene inhibitor 224
Descriptor: 1,2-ETHANEDIOL, 4-(5-{[(3-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide, PHOSPHATE ION, ...
Authors:Godoi, P.H.C, Santiago, A.S, Fala, A.M, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-28
Release date:2019-08-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:to be published
To Be Published
6I8O
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BU of 6i8o by Molmil
Dye type peroxidase Aa from Streptomyces lividans: 39.2kGy structure
Descriptor: Deferrochelatase/peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Ebrahim, A, Moreno-Chicano, T, Worrall, J.A.R, Strange, R.W, Axford, D, Sherrell, D.A, Appleby, M, Owen, R.L.
Deposit date:2018-11-20
Release date:2019-07-31
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins.
Iucrj, 6, 2019
6PDI
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BU of 6pdi by Molmil
Human PIM1 bound to benzothiophene inhibitor 224
Descriptor: 1,2-ETHANEDIOL, 4-(5-{[(3-aminophenyl)methyl]carbamoyl}thiophen-2-yl)-1-benzothiophene-2-carboxamide, GLYCEROL, ...
Authors:Godoi, P.H.C, Fala, A.M, Santiago, A.S, Ramos, P.Z, Sriranganadane, D, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Human PIM1
To Be Published
1JMO
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BU of 1jmo by Molmil
Crystal Structure of the Heparin Cofactor II-S195A Thrombin Complex
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Baglin, T.P, Carrell, R.W, Esmon, C.T, Huntington, J.A.
Deposit date:2001-07-19
Release date:2002-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism.
Proc.Natl.Acad.Sci.USA, 99, 2002
7NTF
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BU of 7ntf by Molmil
Cryo-EM structure of unliganded O-GlcNAc transferase
Descriptor: Isoform 1 of UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit
Authors:Meek, R.W, Blaza, J.N, Davies, G.J.
Deposit date:2021-03-09
Release date:2021-11-17
Last modified:2024-07-10
Method:ELECTRON MICROSCOPY (5.32 Å)
Cite:Cryo-EM structure provides insights into the dimer arrangement of the O-linked beta-N-acetylglucosamine transferase OGT.
Nat Commun, 12, 2021
7OBM
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BU of 7obm by Molmil
Crystal structure of the human Prolyl Endopeptidase-Like protein short form (residues 90-727)
Descriptor: Prolyl endopeptidase-like
Authors:Rosier, K, McDevitt, M.T, Brendan, J.F, Marcaida, M.J, Bingman, C.A, Pagliarini, D.J, Creemers, J.W.M, Smith, R.W, Mitochondrial Protein Partnership (MPP)
Deposit date:2021-04-22
Release date:2021-11-10
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Prolyl endopeptidase-like is a (thio)esterase involved in mitochondrial respiratory chain function.
Iscience, 24, 2021
6PDP
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BU of 6pdp by Molmil
Human PIM1 bound to benzothiophene inhibitor 379
Descriptor: 5-[2-(acetylamino)-1-benzothiophen-4-yl]-N-cyclopropylthiophene-2-carboxamide, Peptide, SULFATE ION, ...
Authors:Godoi, P.H.C, Sriranganadane, D, Santiago, A.S, Fala, A.M, Ramos, P.Z, Mascarello, A, Segretti, N, Azevedo, H, Guimaraes, C.R.W, Arruda, P, Elkins, J.M, Counago, R.M, Structural Genomics Consortium (SGC)
Deposit date:2019-06-19
Release date:2019-07-24
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Human PIM1
To Be Published
5E22
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BU of 5e22 by Molmil
The second PDZ domain of Ligand of Numb protein X 2 in the presence of an electric field of ~1 MV/cm along the crystallographic x axis, with eightfold extrapolation of structure factor differences.
Descriptor: GLYCEROL, Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
Deposit date:2015-09-30
Release date:2016-12-07
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.797 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
5E11
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BU of 5e11 by Molmil
Second PDZ domain of Ligand of Numb protein X 2 by Laue crystallography (no electric field)
Descriptor: Ligand of Numb protein X 2
Authors:Hekstra, D.R, White, K.I, Socolich, M.A, Henning, R.W, Srajer, V, Ranganathan, R.
Deposit date:2015-09-29
Release date:2016-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Electric-field-stimulated protein mechanics.
Nature, 540, 2016
1JMJ
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BU of 1jmj by Molmil
Crystal Structure of Native Heparin Cofactor II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, HEPARIN COFACTOR II, ...
Authors:Baglin, T.P, Carrell, R.W, Church, F.C, Huntington, J.A.
Deposit date:2001-07-18
Release date:2002-08-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Crystal structures of native and thrombin-complexed heparin cofactor II reveal a multistep allosteric mechanism.
Proc.Natl.Acad.Sci.USA, 99, 2002
1JNP
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BU of 1jnp by Molmil
Crystal Structure of Murine Tcl1 at 2.5 Resolution
Descriptor: T-CELL LEUKEMIA/LYMPHOMA PROTEIN 1A
Authors:Petock, J.M, Torshin, I.Y, Wang, Y.F, DuBois, G.C, Croce, C.M, Harrison, R.W, Weber, I.T.
Deposit date:2001-07-24
Release date:2001-11-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of murine Tcl1 at 2.5 A resolution and implications for the TCL oncogene family.
Acta Crystallogr.,Sect.D, 57, 2001

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