Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 920 results

1XN3
DownloadVisualize
BU of 1xn3 by Molmil
Crystal structure of Beta-secretase bound to a long inhibitor with additional upstream residues.
Descriptor: Beta-secretase 1, Peptidic inhibitor
Authors:Turner III, R.T, Hong, L, Koelsch, G, Ghosh, A.K, Tang, J.
Deposit date:2004-10-04
Release date:2005-03-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural locations and functional roles of new subsites S5, S6, and S7 in memapsin 2 (beta-secretase).
Biochemistry, 44, 2005
1Y6A
DownloadVisualize
BU of 1y6a by Molmil
Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
Descriptor: N-[5-(ETHYLSULFONYL)-2-METHOXYPHENYL]-5-[3-(2-PYRIDINYL)PHENYL]-1,3-OXAZOL-2-AMINE, Vascular endothelial growth factor receptor 2
Authors:Harris, P.A, Cheung, M, Hunter, R.N, Brown, M.L, Veal, J.M, Nolte, R.T, Wang, L, Liu, W, Crosby, R.M, Johnson, J.H, Epperly, A.H, Kumar, R, Luttrell, D.K, Stafford, J.A.
Deposit date:2004-12-05
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery and evaluation of 2-anilino-5-aryloxazoles as a novel class of VEGFR2 kinase inhibitors.
J.Med.Chem., 48, 2005
1X6R
DownloadVisualize
BU of 1x6r by Molmil
Structure 5: room temperature crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 1.80A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-11
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
1X6Z
DownloadVisualize
BU of 1x6z by Molmil
Structure 1: cryocooled crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 0.78A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-12
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (0.78 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
1YWN
DownloadVisualize
BU of 1ywn by Molmil
Vegfr2 in complex with a novel 4-amino-furo[2,3-d]pyrimidine
Descriptor: N-{4-[4-AMINO-6-(4-METHOXYPHENYL)FURO[2,3-D]PYRIMIDIN-5-YL]PHENYL}-N'-[2-FLUORO-5-(TRIFLUOROMETHYL)PHENYL]UREA, Vascular endothelial growth factor receptor 2
Authors:Miyazaki, Y, Matsunaga, S, Tang, J, Maeda, Y, Nakano, M, Philippe, R.J, Shibahara, M, Liu, W, Sato, H, Wang, L, Nolte, R.T.
Deposit date:2005-02-18
Release date:2005-08-23
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.71 Å)
Cite:Novel 4-amino-furo[2,3-d]pyrimidines as Tie-2 and VEGFR2 dual inhibitors
Bioorg.Med.Chem.Lett., 15, 2005
1XWE
DownloadVisualize
BU of 1xwe by Molmil
NMR Structure of C345C (NTR) domain of C5 of complement
Descriptor: Complement C5
Authors:Bramham, J, Thai, C.-T, Soares, D.C, Uhrin, D, Ogata, R.T, Barlow, P.N.
Deposit date:2004-10-30
Release date:2004-12-21
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Functional Insights from the Structure of the Multifunctional C345C Domain of C5 of Complement
J.Biol.Chem., 280, 2005
1XQ3
DownloadVisualize
BU of 1xq3 by Molmil
Crystal structure of the human androgen receptor ligand binding domain bound with R1881
Descriptor: (17BETA)-17-HYDROXY-17-METHYLESTRA-4,9,11-TRIEN-3-ONE, androgen receptor
Authors:He, B, Gampe Jr, R.T, Kole, A.J, Hnat, A.T, Stanley, T.B, An, G, Stewart, E.L, Kalman, R.I, Minges, J.T, Wilson, E.M.
Deposit date:2004-10-11
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Structural basis for androgen receptor interdomain and coactivator interactions suggests a transition in nuclear receptor activation function dominance
Mol.Cell, 16, 2004
1Y6B
DownloadVisualize
BU of 1y6b by Molmil
Crystal structure of VEGFR2 in complex with a 2-anilino-5-aryl-oxazole inhibitor
Descriptor: N-(CYCLOPROPYLMETHYL)-4-(METHYLOXY)-3-({5-[3-(3-PYRIDINYL)PHENYL]-1,3-OXAZOL-2-YL}AMINO)BENZENESULFONAMIDE, Vascular endothelial growth factor receptor 2
Authors:Harris, P.A, Cheung, M, Hunter, R.N, Brown, M.L, Veal, J.M, Nolte, R.T, Wang, L, Liu, W, Crosby, R.M, Johnson, J.H, Epperly, A.H, Kumar, R, Luttrell, D.K, Stafford, J.A.
Deposit date:2004-12-05
Release date:2005-06-07
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Discovery and evaluation of 2-anilino-5-aryloxazoles as a novel class of VEGFR2 kinase inhibitors.
J.Med.Chem., 48, 2005
1YBW
DownloadVisualize
BU of 1ybw by Molmil
Protease domain of HGFA with no inhibitor
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hepatocyte growth factor activator precursor
Authors:Shia, S, Stamos, J, Kirchhofer, D, Fan, B, Wu, J, Corpuz, R.T, Santell, L, Lazarus, R.A, Eigenbrot, C.
Deposit date:2004-12-21
Release date:2005-02-15
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Conformational lability in serine protease active sites: structures of hepatocyte growth factor activator (HGFA) alone and with the inhibitory domain from HGFA inhibitor-1B.
J.Mol.Biol., 346, 2005
1YH5
DownloadVisualize
BU of 1yh5 by Molmil
Solution NMR Structure of Protein yggU from Escherichia coli. Northeast Structural Genomics Consortium Target ER14.
Descriptor: ORF, HYPOTHETICAL PROTEIN
Authors:Aramini, J.M, Xiao, R, Huang, Y.J, Acton, T.B, Wu, M.J, Mills, J.L, Tejero, R.T, Szyperski, T, Montelione, G.T, Northeast Structural Genomics Consortium (NESG)
Deposit date:2005-01-06
Release date:2005-02-01
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Solution Structure of the Hypothetical Protein Yggu from E. Coli. Northeast Structural Genomics Consortium Target Er14.
To be Published
1Y0S
DownloadVisualize
BU of 1y0s by Molmil
Crystal structure of PPAR delta complexed with GW2331
Descriptor: (2S)-2-(4-[2-(3-[2,4-DIFLUOROPHENYL]-1-HEPTYLUREIDO)ETHYL]PHENOXY)-2-METHYLBUTYRIC ACID, IODIDE ION, Peroxisome proliferator activated receptor delta, ...
Authors:Takada, I, Yu, R.T, Xu, H.E, Xu, R.X, Lambert, M.H, Montana, V.G, Kliewer, S.A, Evans, R.M, Umesono, K.
Deposit date:2004-11-16
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Alteration of a Single Amino Acid in Peroxisome Proliferator-Activated Receptor-alpha (PPARalpha) Generates a PPAR delta Phenotype
MOL.ENDOCRINOL., 14, 2000
1Y6U
DownloadVisualize
BU of 1y6u by Molmil
The Structure of the Excisionase (Xis) Protein from Conjugative Transposon Tn916 Provides Insights into the Regulation of Heterobivalent Tyrosine Recombinases
Descriptor: Excisionase from transposon Tn916
Authors:Abbani, M, Iwahara, M, Clubb, R.T.
Deposit date:2004-12-07
Release date:2005-03-15
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The structure of the excisionase (xis) protein from conjugative transposon tn916 provides insights into the regulation of heterobivalent tyrosine recombinases
J.Mol.Biol., 347, 2005
1YFN
DownloadVisualize
BU of 1yfn by Molmil
Versatile modes of peptide recognition by the AAA+ adaptor protein SspB- the crystal structure of a SspB-RseA complex
Descriptor: Sigma-E factor negative regulatory protein, Stringent starvation protein B
Authors:Levchenko, I, Grant, R.A, Flynn, J.M, Sauer, R.T, Baker, T.A.
Deposit date:2005-01-03
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Versatile modes of peptide recognition by the AAA+ adaptor protein SspB
Nat.Struct.Mol.Biol., 12, 2005
1ZSZ
DownloadVisualize
BU of 1zsz by Molmil
Crystal structure of a computationally designed SspB heterodimer
Descriptor: MAGNESIUM ION, Stringent starvation protein B homolog
Authors:Bolon, D.N, Grant, R.A, Baker, T.A, Sauer, R.T.
Deposit date:2005-05-25
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Specificity versus stability in computational protein design.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1XOW
DownloadVisualize
BU of 1xow by Molmil
Crystal structure of the human androgen receptor ligand binding domain bound with an androgen receptor NH2-terminal peptide, AR20-30, and R1881
Descriptor: (17BETA)-17-HYDROXY-17-METHYLESTRA-4,9,11-TRIEN-3-ONE, androgen receptor, decamer fragment of androgen receptor
Authors:He, B, Gampe Jr, R.T, Kole, A.J, Hnat, A.T, Stanley, T.B, An, G, Stewart, E.L, Kalman, R.I, Minges, J.T, Wilson, E.M.
Deposit date:2004-10-07
Release date:2004-11-16
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural basis for androgen receptor interdomain and coactivator interactions suggests a transition in nuclear receptor activation function dominance
Mol.Cell, 16, 2004
1ZJR
DownloadVisualize
BU of 1zjr by Molmil
Crystal Structure of A. aeolicus TrmH/SpoU tRNA modifying enzyme
Descriptor: GLYCEROL, SULFATE ION, tRNA (Guanosine-2'-O-)-methyltransferase
Authors:Pleshe, E, Truesdell, J, Batey, R.T.
Deposit date:2005-04-30
Release date:2005-08-09
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a class II TrmH tRNA-modifying enzyme from Aquifex aeolicus.
Acta Crystallogr.,Sect.F, 61, 2005
1X6Y
DownloadVisualize
BU of 1x6y by Molmil
Structure 6: room temperature crystal structure of the truncated pak pilin from Pseudomonas aeruginosa at 1.80A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-12
Release date:2005-04-26
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
1X6P
DownloadVisualize
BU of 1x6p by Molmil
Structure 4; room temperature crystal structure of truncated pak pilin from Pseudomonas aeruginosa at 1.63A resolution
Descriptor: Fimbrial protein
Authors:Dunlop, K.V, Irvin, R.T, Hazes, B.
Deposit date:2004-08-11
Release date:2005-04-19
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Pros and cons of cryocrystallography: should we also collect a room-temperature data set?
Acta Crystallogr.,Sect.D, 61, 2005
233D
DownloadVisualize
BU of 233d by Molmil
THE CRYSTAL STRUCTURE ANALYSIS OF D(CGCGAASSCGCG)2: A SYNTHETIC DNA DODECAMER DUPLEX CONTAINING FOUR 4'-THIO-2'-DEOXYTHYMIDINE NUCLEOTIDES
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*)-D(*(T49)P*(T49)P*)-D(*CP*GP*CP*G)-3')
Authors:Boggon, T.J, Hancox, E.L, McAuley-Hecht, K.E, Connolly, B.A, Hunter, W.N, Brown, T, Walker, R.T, Leonard, G.A.
Deposit date:1995-10-16
Release date:1996-06-21
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The crystal structure analysis of d(CGCGAASSCGCG)2, a synthetic DNA dodecamer duplex containing four 4'-thio-2'-deoxythymidine nucleotides.
Nucleic Acids Res., 24, 1996
1RG0
DownloadVisualize
BU of 1rg0 by Molmil
Monoclinic crystal form of the truncated K122-4 pilin from Pseudomonas aeruginosa
Descriptor: Fimbrial protein
Authors:Audette, G.F, Irvin, R.T, Hazes, B.
Deposit date:2003-11-10
Release date:2004-09-07
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystallographic Analysis of the Pseudomonas aeruginosa Strain K122-4 Monomeric Pilin Reveals a Conserved Receptor-Binding Architecture
Biochemistry, 43, 2004
1JQF
DownloadVisualize
BU of 1jqf by Molmil
Human Transferrin N-Lobe Mutant H249Q
Descriptor: CARBONATE ION, FE (III) ION, POTASSIUM ION, ...
Authors:Baker, H.M, Mason, A.B, He, Q.-Y, MacGillivray, R.T.A, Baker, E.N.
Deposit date:2001-08-06
Release date:2001-10-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Ligand variation in the transferrin family: the crystal structure of the H249Q mutant of the human transferrin N-lobe as a model for iron binding in insect transferrins.
Biochemistry, 40, 2001
1VWF
DownloadVisualize
BU of 1vwf by Molmil
STREPTAVIDIN COMPLEXED WITH CYCLO-AC-[CHPQGPPC]-NH2 MONOMER, PH 3.67
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1VWB
DownloadVisualize
BU of 1vwb by Molmil
STREPTAVIDIN-CYCLO-AC-[CHPQFC]-NH2, PH 11.8
Descriptor: PEPTIDE LIGAND CONTAINING HPQ, STREPTAVIDIN
Authors:Katz, B.A, Cass, R.T.
Deposit date:1997-03-03
Release date:1998-03-18
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:In crystals of complexes of streptavidin with peptide ligands containing the HPQ sequence the pKa of the peptide histidine is less than 3.0.
J.Biol.Chem., 272, 1997
1QVE
DownloadVisualize
BU of 1qve by Molmil
Crystal structure of the truncated K122-4 pilin from Pseudomonas aeruginosa
Descriptor: Fimbrial protein
Authors:Audette, G.F, Irvin, R.T, Hazes, B.
Deposit date:2003-08-27
Release date:2004-09-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Crystallographic Analysis of the Pseudomonas aeruginosa Strain K122-4 Monomeric Pilin Reveals a Conserved Receptor-Binding Architecture
Biochemistry, 43, 2004
3GW1
DownloadVisualize
BU of 3gw1 by Molmil
The structure of the Caulobacter crescentus CLPs protease adaptor protein in complex with FGG tripeptide
Descriptor: ATP-dependent Clp protease adapter protein ClpS, FGG peptide, MAGNESIUM ION
Authors:Baker, T.A, Roman-Hernandez, G, Sauer, R.T, Grant, R.A.
Deposit date:2009-03-31
Release date:2009-05-05
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Molecular basis of substrate selection by the N-end rule adaptor protein ClpS.
Proc.Natl.Acad.Sci.USA, 106, 2009

224004

PDB entries from 2024-08-21

PDB statisticsPDBj update infoContact PDBjnumon