Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 920 results

1OUL
DownloadVisualize
BU of 1oul by Molmil
Structure of the AAA+ protease delivery protein SspB
Descriptor: Stringent starvation protein B homolog
Authors:Levchenko, I, Grant, R.A, Wah, D.A, Sauer, R.T, Baker, T.A.
Deposit date:2003-03-24
Release date:2003-09-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a delivery protein for an AAA+ protease in complex with a peptide degradation tag
Mol.Cell, 12, 2003
2BKR
DownloadVisualize
BU of 2bkr by Molmil
NEDD8 NEDP1 complex
Descriptor: NEDDYLIN, SENTRIN-SPECIFIC PROTEASE 8
Authors:Shen, L.N, Liu, H, Dong, C, Xirodimas, D, Naismith, J.H, Hay, R.T.
Deposit date:2005-02-18
Release date:2005-09-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Nedd8 Ubiquitin Discrimination by the Deneddylating Enzyme Nedp1
Embo J., 24, 2005
2XRE
DownloadVisualize
BU of 2xre by Molmil
Detection of cobalt in previously unassigned human SENP1 structure
Descriptor: COBALT (II) ION, GLYCEROL, SENTRIN-SPECIFIC PROTEASE 1
Authors:Rimsa, V, Eadsforth, T, Hay, R.T, Hunter, W.N.
Deposit date:2010-09-14
Release date:2010-10-06
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:The Role of Co2+ in the Crystallization of Human Senp1 and Comments on the Limitations of Automated Refinement Protocols
Acta Crystallogr.,Sect.F, 67, 2011
2DTN
DownloadVisualize
BU of 2dtn by Molmil
Crystal structure of Helicobacter pylori undecaprenyl pyrophosphate synthase complexed with pyrophosphate
Descriptor: DIPHOSPHATE, undecaprenyl pyrophosphate synthase
Authors:Guo, R.T, Kuo, C.J, Chen, C.L, Ko, T.P, Liang, P.H, Wang, A.H.-J.
Deposit date:2006-07-13
Release date:2007-06-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Biochemical characterization, crystal structure, and inhibitors of Helicobacter pylori undecaprenyl pyrophosphate synthase
To be Published
2BKQ
DownloadVisualize
BU of 2bkq by Molmil
NEDD8 protease
Descriptor: SENTRIN-SPECIFIC PROTEASE 8
Authors:Shen, L.N, Liu, H, Dong, C, Xirodimas, D, Naismith, J.H, Hay, R.T.
Deposit date:2005-02-18
Release date:2005-02-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Nedd8 Ubiquitin Discrimination by the Deneddylating Enzyme Nedp1
Embo J., 24, 2005
2BB8
DownloadVisualize
BU of 2bb8 by Molmil
N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: INTEGRASE
Authors:Clubb, R.T, Connolly, K.M, Wojciak, J.M.
Deposit date:1998-05-12
Release date:1998-11-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Site-specific DNA binding using a variation of the double stranded RNA binding motif.
Nat.Struct.Biol., 5, 1998
1Q5Y
DownloadVisualize
BU of 1q5y by Molmil
Nickel-Bound C-terminal Regulatory Domain of NikR
Descriptor: 1,2-ETHANEDIOL, NICKEL (II) ION, Nickel responsive regulator
Authors:Schreiter, E.R, Sintchak, M.D, Guo, Y, Chivers, P.T, Sauer, R.T, Drennan, C.L.
Deposit date:2003-08-11
Release date:2003-09-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Crystal Structure of the Nickel-Responsive Transcription Factor NikR
Nat.Struct.Biol., 10, 2003
2EES
DownloadVisualize
BU of 2ees by Molmil
Guanine riboswitch A21U, U75A mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine riboswitch, ...
Authors:Gilbert, S.D, Edwards, A.L, Batey, R.T.
Deposit date:2007-02-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007
2E8T
DownloadVisualize
BU of 2e8t by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, FsPP and IPP
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION, ...
Authors:Guo, R.T, Ko, T.P, Chen, C.K.-M, Jeng, W.Y, Chang, T.H, Liang, P.H, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-01-23
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2Z4Y
DownloadVisualize
BU of 2z4y by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-252
Descriptor: (1-HYDROXYNONANE-1,1-DIYL)BIS(PHOSPHONIC ACID), Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Chen, C.K.-M, Guo, R.T, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-06-26
Release date:2008-07-01
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation
J.Med.Chem., 51, 2008
2E8W
DownloadVisualize
BU of 2e8w by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and IPP
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Ko, T.P, Chen, C.K.-M, Jeng, W.Y, Chang, T.H, Liang, P.H, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-01-24
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E90
DownloadVisualize
BU of 2e90 by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium, pyrophosphate and FPP
Descriptor: FARNESYL DIPHOSPHATE, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION, ...
Authors:Guo, R.T, Ko, T.P, Chen, C.K.-M, Jeng, W.Y, Chang, T.H, Liang, P.H, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-01-24
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2AZK
DownloadVisualize
BU of 2azk by Molmil
Crystal structure for the mutant W136E of Sulfolobus solfataricus hexaprenyl pyrophosphate synthase
Descriptor: Geranylgeranyl pyrophosphate synthetase
Authors:Sun, H.Y, Ko, T.P, Kuo, C.J, Guo, R.T, Chou, C.C, Liang, P.H, Wang, A.H.J.
Deposit date:2005-09-12
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Homodimeric hexaprenyl pyrophosphate synthase from the thermoacidophilic crenarchaeon Sulfolobus solfataricus displays asymmetric subunit structures
J.Bacteriol., 187, 2005
2AZL
DownloadVisualize
BU of 2azl by Molmil
Crystal structure for the mutant F117E of Thermotoga maritima octaprenyl pyrophosphate synthase
Descriptor: octoprenyl-diphosphate synthase
Authors:Sun, H.Y, Ko, T.P, Kuo, C.J, Guo, R.T, Chou, C.C, Liang, P.H, Wang, A.H.
Deposit date:2005-09-12
Release date:2006-03-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Homodimeric hexaprenyl pyrophosphate synthase from the thermoacidophilic crenarchaeon Sulfolobus solfataricus displays asymmetric subunit structures
J.Bacteriol., 187, 2005
2AVU
DownloadVisualize
BU of 2avu by Molmil
Structure of the Escherichia coli FlhDC complex, a prokaryotic heteromeric regulator of transcription
Descriptor: Flagellar transcriptional activator flhC, Transcriptional activator flhD, ZINC ION
Authors:Wang, S, Fleming, R.T, Westbrook, E.M, Matsumura, P, McKay, D.B.
Deposit date:2005-08-30
Release date:2005-12-13
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of the Escherichia coli FlhDC Complex, a Prokaryotic Heteromeric Regulator of Transcription.
J.Mol.Biol., 355, 2006
1MYL
DownloadVisualize
BU of 1myl by Molmil
SUBSTITUTING HYDROPHOBIC RESIDUES FOR A BURIED SALT BRIDGE ENHANCES PROTEIN STABILITY BUT DOES NOT REDUCE CONFORMATIONAL SPECIFICITY
Descriptor: ARC REPRESSOR
Authors:Schildbach, J.F, Waldburger, C.D, Sauer, R.T.
Deposit date:1994-10-06
Release date:1995-01-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Are buried salt bridges important for protein stability and conformational specificity?
Nat.Struct.Biol., 2, 1995
2B57
DownloadVisualize
BU of 2b57 by Molmil
Guanine Riboswitch C74U mutant bound to 2,6-diaminopurine
Descriptor: 65-MER, 9H-PURINE-2,6-DIAMINE, ACETATE ION, ...
Authors:Gilbert, S.D, Stoddard, C.D, Wise, S.J, Batey, R.T.
Deposit date:2005-09-27
Release date:2006-05-23
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Thermodynamic and kinetic characterization of ligand binding to the purine riboswitch aptamer domain.
J.Mol.Biol., 359, 2006
2ALE
DownloadVisualize
BU of 2ale by Molmil
Crystal structure of yeast RNA splicing factor Snu13p
Descriptor: MAGNESIUM ION, NHP2/L7aE family protein YEL026W
Authors:Dobbyn, H.C, McEwan, P.A, Bella, J, O'Keefe, R.T.
Deposit date:2005-08-05
Release date:2006-10-03
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Analysis of pre-mRNA and pre-rRNA processing factor Snu13p structure and mutants.
Biochem.Biophys.Res.Commun., 360, 2007
2AO6
DownloadVisualize
BU of 2ao6 by Molmil
Crystal structure of the human androgen receptor ligand binding domain bound with TIF2(iii) 740-753 peptide and R1881
Descriptor: (17BETA)-17-HYDROXY-17-METHYLESTRA-4,9,11-TRIEN-3-ONE, 14-mer fragment of Nuclear receptor coactivator 2, androgen receptor
Authors:He, B, Gampe Jr, R.T, Kole, A.J, Hnat, A.T, Stanley, T.B, An, G, Stewart, E.L, Kalman, R.I, Minges, J.T, Wilson, E.M.
Deposit date:2005-08-12
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Structural basis for androgen receptor interdomain and coactivator interactions suggests a transition in nuclear receptor activation function dominance
Mol.Cell, 16, 2004
2E9A
DownloadVisualize
BU of 2e9a by Molmil
E. coli undecaprenyl pyrophosphate synthase in complex with BPH-628
Descriptor: (1-HYDROXY-1-PHOSPHONO-2-[1,1';4',1'']TERPHENYL-3-YL-ETHYL)-PHOSPHONIC ACID, Undecaprenyl pyrophosphate synthetase
Authors:Guo, R.T, Ko, T.P, Cao, R, Liang, P.H, Oldfield, E, Wang, A.H.J.
Deposit date:2007-01-24
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E1R
DownloadVisualize
BU of 2e1r by Molmil
Structure of eEF2 in complex with a sordarin derivative
Descriptor: (1S,4S,5S,6R,9S,11S)-6-CHLORO-9-FORMYL-13-ISOPROPYL-5-METHYL-2-({[(3AR,5R,7R ,7AS)-7-METHYL-3-METHYLENEHEXAHYDRO-2H-FURO[2,3-C]PYRAN-5-YL]OXY}METHYL)TETR ACYCLO[7.4.0.02,11.04,8]TRIDEC-12-ENE-1-CARBOXYLIC ACI, Elongation factor 2, GUANOSINE-5'-DIPHOSPHATE
Authors:Soe, R, Mosley, R.T, Andersen, G.R.
Deposit date:2006-10-27
Release date:2006-11-14
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Sordarin derivatives induce a novel conformation of the yeast ribosome translocation factor eEF2
J.Biol.Chem., 282, 2007
1MNT
DownloadVisualize
BU of 1mnt by Molmil
SOLUTION STRUCTURE OF DIMERIC MNT REPRESSOR (1-76)
Descriptor: MNT REPRESSOR
Authors:Burgering, M.J.M, Boelens, R, Gilbert, D.E, Breg, J.N, Knight, K.L, Sauer, R.T, Kaptein, R.
Deposit date:1994-06-28
Release date:1994-09-30
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of dimeric Mnt repressor (1-76).
Biochemistry, 33, 1994
2E95
DownloadVisualize
BU of 2e95 by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-675
Descriptor: 1-HYDROXY-2-[3'-(NAPHTHALENE-2-SULFONYLAMINO)-BIPHENYL-3-YL]ETHYLIDENE-1,1-BISPHOSPHONIC ACID, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Cao, R, Ko, T.P, Jeng, W.Y, Chang, T.H, Chen, C.K.-M, Liang, P.H, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-01-24
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E94
DownloadVisualize
BU of 2e94 by Molmil
S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-364
Descriptor: 3-BIPHENYL-3-YL-1-(2-HYDROXY-2,2-DIPHOSPHONOETHYL)PYRIDINIUM, Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION
Authors:Guo, R.T, Ko, T.P, Cao, R, Chen, C.K.-M, Jeng, W.Y, Chang, T.H, Liang, P.H, Oldfield, E, Wang, A.H.-J.
Deposit date:2007-01-24
Release date:2007-06-12
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.18 Å)
Cite:Bisphosphonates target multiple sites in both cis- and trans-prenyltransferases
Proc.Natl.Acad.Sci.Usa, 104, 2007
2EET
DownloadVisualize
BU of 2eet by Molmil
Guanine Riboswitch A21G, U75C mutant bound to hypoxanthine
Descriptor: ACETATE ION, COBALT HEXAMMINE(III), Guanine Riboswitch, ...
Authors:Gilbert, S.D, Edwards, A.L, Batey, R.T.
Deposit date:2007-02-18
Release date:2007-11-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Mutational analysis of the purine riboswitch aptamer domain
Biochemistry, 46, 2007

224004

數據於2024-08-21公開中

PDB statisticsPDBj update infoContact PDBjnumon