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PDB: 2325 results

2OF6
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Structure of immature West Nile virus
Descriptor: envelope glycoprotein E
Authors:Zhang, Y, Kaufmann, B, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-01-02
Release date:2007-04-03
Last modified:2023-12-27
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Structure of immature west nile virus.
J.Virol., 81, 2007
5WBN
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BU of 5wbn by Molmil
Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
Descriptor: 3-(3-benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid, ACETATE ION, CHLORIDE ION, ...
Authors:Harding, R.J, Walker, J.R, Ferreira de Freitas, R, Ravichandran, M, Santhakumar, V, Schapira, M, Bountra, C, Edwards, A.M, Arrowsmith, C.H.
Deposit date:2017-06-29
Release date:2017-08-02
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:Crystal structure of fragment 3-(3-Benzyl-2-oxo-2H-[1,2,4]triazino[2,3-c]quinazolin-6-yl)propanoic acid bound in the ubiquitin binding pocket of the HDAC6 zinc-finger domain
To be published
5WWT
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Crystal structure of human NSun6/tRNA
Descriptor: Putative methyltransferase NSUN6, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.197 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
2J92
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3C PROTEASE FROM TYPE A10(61) FOOT-AND-MOUTH DISEASE VIRUS - Crystal packing mutant (K51Q)
Descriptor: PICORNAIN 3C
Authors:Sweeney, T.R, Birtley, J.R, Leatherbarrow, R.J, Curry, S.
Deposit date:2006-11-01
Release date:2006-12-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural and Mutagenic Analysis of Foot-and-Mouth Disease Virus 3C Protease Reveals the Role of the {Beta}-Ribbon in Proteolysis.
J.Virol., 81, 2007
5WWS
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BU of 5wws by Molmil
Crystal structure of human NSun6/tRNA/SAM
Descriptor: Putative methyltransferase NSUN6, S-ADENOSYLMETHIONINE, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.247 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
2OM2
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BU of 2om2 by Molmil
Crystal Structure Of Human G[alpha]i1 Bound To The Goloco Motif Of Rgs14
Descriptor: GUANOSINE-5'-DIPHOSPHATE, Guanine nucleotide-binding protein G(i), alpha-1 subunit, ...
Authors:Siderovski, D.P, Kimple, R.J.
Deposit date:2007-01-20
Release date:2007-07-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure-based Protocol for Identifying Mutations that Enhance Protein-Protein Binding Affinities.
J.Mol.Biol., 371, 2007
3O3G
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BU of 3o3g by Molmil
T. maritima RNase H2 in complex with nucleic acid substrate and calcium ions
Descriptor: CALCIUM ION, DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3'), DNA/RNA (5'-D(*GP*AP*CP*AP*C)-R(P*C)-D(P*TP*GP*AP*TP*TP*C)-3'), ...
Authors:Rychlik, M.P, Chon, H, Cerritelli, S.M, Klimek, P, Crouch, R.J, Nowotny, M.
Deposit date:2010-07-24
Release date:2010-12-08
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structures of RNase H2 in Complex with Nucleic Acid Reveal the Mechanism of RNA-DNA Junction Recognition and Cleavage.
Mol.Cell, 40, 2010
2OVC
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BU of 2ovc by Molmil
Crystal structure of a coiled-coil tetramerization domain from Kv7.4 channels
Descriptor: Potassium voltage-gated channel subfamily KQT member 4
Authors:Howard, R.J, Clark, K.A, Holton, J.M, Minor, D.L.
Deposit date:2007-02-13
Release date:2007-03-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.07 Å)
Cite:Structural Insight into KCNQ (Kv7) Channel Assembly and Channelopathy.
Neuron, 53, 2007
2P5V
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BU of 2p5v by Molmil
Crystal Structure of Transcriptional Regulator NMB0573 from Neisseria Meningitidis
Descriptor: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
Authors:Ren, J, Sainsbury, S, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2007-03-16
Release date:2007-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis.
J.Biol.Chem., 282, 2007
2P6S
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BU of 2p6s by Molmil
Crystal Structure of Transcriptional Regulator NMB0573/L-Met Complex from Neisseria Meningitidis
Descriptor: CALCIUM ION, GLYCEROL, METHIONINE, ...
Authors:Ren, J, Sainsbury, S, Owens, R.J, Oxford Protein Production Facility (OPPF)
Deposit date:2007-03-19
Release date:2007-04-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure and Transcriptional Analysis of a Global Regulator from Neisseria meningitidis.
J.Biol.Chem., 282, 2007
3OCN
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BU of 3ocn by Molmil
Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa in complex with ceftazidime
Descriptor: 1-({(2R)-2-[(1R)-1-{[(2Z)-2-(2-amino-1,3-thiazol-4-yl)-2-{[(2-carboxypropan-2-yl)oxy]imino}acetyl]amino}-2-oxoethyl]-4-carboxy-3,6-dihydro-2H-1,3-thiazin-5-yl}methyl)pyridinium, penicillin-binding protein 3
Authors:Sainsbury, S, Bird, L, Stuart, D.I, Owens, R.J, Ren, J, Oxford Protein Production Facility (OPPF)
Deposit date:2010-08-10
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms
J.Mol.Biol., 405, 2011
5WWR
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BU of 5wwr by Molmil
Crystal structure of human NSun6/tRNA/SFG
Descriptor: Putative methyltransferase NSUN6, SINEFUNGIN, tRNA
Authors:Liu, R.J, Long, T, Wang, E.D.
Deposit date:2017-01-04
Release date:2017-06-28
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.096 Å)
Cite:Structural basis for substrate binding and catalytic mechanism of a human RNA:m5C methyltransferase NSun6
Nucleic Acids Res., 45, 2017
2OUL
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BU of 2oul by Molmil
The Structure of Chagasin in Complex with a Cysteine Protease Clarifies the Binding Mode and Evolution of a New Inhibitor Family
Descriptor: Chagasin, Falcipain 2
Authors:Wang, S.X, Chand, K, Huang, R, Whisstock, J, Jacobelli, J, Fletterick, R.J, Rosenthal, P.J, McKerrow, J.H.
Deposit date:2007-02-11
Release date:2008-02-26
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The structure of chagasin in complex with a cysteine protease clarifies the binding mode and evolution of an inhibitor family.
Structure, 15, 2007
5V3F
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BU of 5v3f by Molmil
Co-crystal structure of the fluorogenic RNA Mango
Descriptor: 4-{[(2S)-3-{2,16-dioxo-20-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]-6,9,12-trioxa-3,15-diazaicosan-1-yl}-2,3-dihydro-1,3-benzothiazol-2-yl]methyl}-1-methylquinolin-1-ium, PHOSPHATE ION, POTASSIUM ION, ...
Authors:Trachman, R.J, Ferre-D'Amare, A.R.
Deposit date:2017-03-07
Release date:2017-05-24
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for high-affinity fluorophore binding and activation by RNA Mango.
Nat. Chem. Biol., 13, 2017
5V2N
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BU of 5v2n by Molmil
Crystal Structure of APO Human SETD8
Descriptor: 1,2-ETHANEDIOL, N-lysine methyltransferase KMT5A
Authors:Skene, R.J.
Deposit date:2017-03-05
Release date:2018-03-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:The dynamic conformational landscape of the protein methyltransferase SETD8.
Elife, 8, 2019
2J47
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BU of 2j47 by Molmil
Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with a imidazole-pugnac hybrid inhibitor
Descriptor: (5R,6R,7R,8S)-8-(ACETYLAMINO)-6,7-DIHYDROXY-5-(HYDROXYMETHYL)-N-PHENYL-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-2-CARBOXAMIDE, GLUCOSAMINIDASE, GLYCEROL
Authors:Dennis, R.J, Davies, G.J.
Deposit date:2006-08-25
Release date:2006-10-03
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Inhibition of O-Glcnacase by a Gluco-Configured Nagstatin and a Pugnac-Imidazole Hybrid Inhibitor
Chem. Commun., 42, 2006
2NC4
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BU of 2nc4 by Molmil
Solution Structure of N-Galactosylated Pin1 WW Domain
Descriptor: Pin1 WW Domain, beta-D-galactopyranose
Authors:Hsu, C, Park, S, Mortenson, D.E, Foley, B, Wang, X, Woods, R.J, Case, D.A, Powers, E.T, Wong, C, Dyson, H, Kelly, J.W.
Deposit date:2016-03-20
Release date:2016-06-08
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:The Dependence of Carbohydrate-Aromatic Interaction Strengths on the Structure of the Carbohydrate.
J.Am.Chem.Soc., 138, 2016
3OCL
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BU of 3ocl by Molmil
Crystal structure of penicillin-binding protein 3 from Pseudomonas aeruginosa in complex with carbenicillin
Descriptor: (2R,4S)-2-[(1R)-1-{[(2S)-2-carboxy-2-phenylacetyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Sainsbury, S, Bird, L, Stuart, D.I, Owens, R.J, Ren, J, Oxford Protein Production Facility (OPPF)
Deposit date:2010-08-10
Release date:2010-11-10
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of penicillin-binding protein 3 from Pseudomonas aeruginosa: comparison of native and antibiotic-bound forms
J.Mol.Biol., 405, 2011
3OKE
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BU of 3oke by Molmil
Crystal structure of S25-39 in complex with Ko
Descriptor: S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain, ZINC ION, ...
Authors:Blackler, R.J, Evans, S.V.
Deposit date:2010-08-24
Release date:2011-04-06
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
3OKM
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BU of 3okm by Molmil
Crystal structure of unliganded S25-39
Descriptor: S25-39 Fab (IgG1k) heavy chain, S25-39 Fab (IgG1k) light chain
Authors:Blackler, R.J, Evans, S.V.
Deposit date:2010-08-25
Release date:2011-04-06
Last modified:2018-03-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:A Common NH53K Mutation in the Combining Site of Antibodies Raised against Chlamydial LPS Glycoconjugates Significantly Increases Avidity.
Biochemistry, 50, 2011
2P2D
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BU of 2p2d by Molmil
Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia coli L-Asparaginase I
Descriptor: GLYCEROL, L-ASPARAGINASE I
Authors:Yun, M.-K, Nourse, A, White, S.W, Rock, C.O, Heath, R.J.
Deposit date:2007-03-07
Release date:2007-05-15
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.89 Å)
Cite:Crystal Structure and Allosteric Regulation of the Cytoplasmic Escherichia colil-Asparaginase I
J.Mol.Biol., 369, 2007
3OLO
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BU of 3olo by Molmil
Crystal structure of a PAS domain from two-component sensor histidine kinase
Descriptor: GLYCEROL, Two-component sensor histidine kinase
Authors:Michalska, K, Chhor, G, Bearden, J, Fenske, R.J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-08-26
Release date:2010-09-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.094 Å)
Cite:Crystal structure of a PAS domain from two-component sensor histidine kinase
To be Published
3QEF
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BU of 3qef by Molmil
The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases
Descriptor: 1,2-ETHANEDIOL, Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N, ...
Authors:Cartmell, A, Mckee, L.S, Pena, M, Larsbrink, J, Brumer, H, Lewis, R.J, Viks-Nielsen, A, Gilbert, H.J, Marles-Wright, J.
Deposit date:2011-01-20
Release date:2011-02-16
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.789 Å)
Cite:The Structure and Function of an Arabinan-specific {alpha}-1,2-Arabinofuranosidase Identified from Screening the Activities of Bacterial GH43 Glycoside Hydrolases.
J.Biol.Chem., 286, 2011
2J4G
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BU of 2j4g by Molmil
Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with n-butyl- thiazoline inhibitor
Descriptor: (3AR,5R,6S,7R,7AR)-5-(HYDROXYMETHYL)-2-PROPYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOL, ACETATE ION, GLYCEROL, ...
Authors:Dennis, R.J, Davies, G.J.
Deposit date:2006-08-31
Release date:2007-01-30
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Analysis of Pugnac and Nag-Thiazoline as Transition State Analogues for Human O-Glcnacase: Mechanistic and Structural Insights Into Inhibitor Selectivity and Transition State Poise.
J.Am.Chem.Soc., 129, 2007
5U75
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The structure of Staphylococcal Enterotoxin-like X (SElX), a Unique Superantigen
Descriptor: Enterotoxin-like toxin X, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Ting, Y.T, Young, P.G, Langley, R.J, Baker, H, Fraser, J.D.
Deposit date:2016-12-11
Release date:2017-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Staphylococcal enterotoxin-like X (SElX) is a unique superantigen with functional features of two major families of staphylococcal virulence factors.
PLoS Pathog., 13, 2017

223532

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