Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 2341 results

4KPG
DownloadVisualize
BU of 4kpg by Molmil
Crystal structure of MycP1 from the ESX-1 type VII secretion system
Descriptor: Membrane-anchored mycosin mycp1
Authors:Solomonson, M, Wasney, G.A, Watanabe, N, Gruninger, R.J, Prehna, G, Strynadka, N.C.J.
Deposit date:2013-05-13
Release date:2013-05-22
Last modified:2013-07-03
Method:X-RAY DIFFRACTION (2.148 Å)
Cite:Structure of the Mycosin-1 Protease from the Mycobacterial ESX-1 Protein Type VII Secretion System.
J.Biol.Chem., 288, 2013
4DXG
DownloadVisualize
BU of 4dxg by Molmil
Crystal structure of Staphylococcal Superantigen-Like protein 4 complexed with sialyl Lewis X
Descriptor: CHLORIDE ION, N-acetyl-alpha-neuraminic acid-(2-3)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), ...
Authors:Hermans, S.J, Baker, H.M, Langley, R.J, Baker, E.N, Fraser, J.F.
Deposit date:2012-02-27
Release date:2012-09-19
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural and functional properties of staphylococcal superantigen-like protein 4
Infect.Immun., 80, 2012
4KQQ
DownloadVisualize
BU of 4kqq by Molmil
CRYSTAL STRUCTURE OF PENICILLIN-BINDING PROTEIN 3 FROM PSEUDOMONAS AERUGINOSA IN COMPLEX WITH (5S)-Penicilloic Acid
Descriptor: (2S,4S)-2-[(R)-carboxy{[(2R)-2-{[(4-ethyl-2,3-dioxopiperazin-1-yl)carbonyl]amino}-2-phenylacetyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acid, CHLORIDE ION, GLYCEROL, ...
Authors:Nettleship, J.E, Stuart, D.I, Owens, R.J, Ren, J.
Deposit date:2013-05-15
Release date:2013-11-06
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Binding of (5S)-Penicilloic Acid to Penicillin Binding Protein 3.
Acs Chem.Biol., 8, 2013
3PZU
DownloadVisualize
BU of 3pzu by Molmil
P212121 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168
Descriptor: Endoglucanase, GLYCEROL
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
3SBJ
DownloadVisualize
BU of 3sbj by Molmil
MutM slanted complex 7
Descriptor: 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*AP*GP*G)-3', 5'-D(P*CP*CP*TP*GP*GP*TP*(CX)P*TP*AP*CP*C)-3', Formamidopyrimidine-DNA glycosylase, ...
Authors:Sung, R.J, Zhang, M, Verdine, G.L.
Deposit date:2011-06-05
Release date:2012-01-11
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Strandwise translocation of a DNA glycosylase on undamaged DNA.
Proc.Natl.Acad.Sci.USA, 109, 2012
1WUU
DownloadVisualize
BU of 1wuu by Molmil
crystal structure of human galactokinase complexed with MgAMPPNP and galactose
Descriptor: Galactokinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Thoden, J.B, Timson, D.J, Reece, R.J, Holden, H.M.
Deposit date:2004-12-08
Release date:2004-12-28
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Molecular Structure of Human Galactokinase: IMPLICATIONS FOR TYPE II GALACTOSEMIA
J.Biol.Chem., 280, 2005
4G1F
DownloadVisualize
BU of 4g1f by Molmil
Crystal Structure of human Dipeptidyl Peptidase IV in complex with a pyridopyrimidinedione analogue
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 7-amino-6-(aminomethyl)-5-(2-bromophenyl)-1,3-dimethylpyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione, ...
Authors:Skene, R.J, Gwaltney, S.L.
Deposit date:2012-07-10
Release date:2013-02-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structure-based design of pyridopyrimidinediones as dipeptidyl peptidase IV inhibitors.
Bioorg.Med.Chem.Lett., 22, 2012
7WZO
DownloadVisualize
BU of 7wzo by Molmil
Crystal structure of the SARS-CoV-2 nucleocapsid protein N-terminal domain in complex with Ubl1
Descriptor: Nucleoprotein, nsp3
Authors:Ni, X.C, Zhou, R.J, Lei, J.
Deposit date:2022-02-18
Release date:2023-02-01
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Structural insights into ribonucleoprotein dissociation by nucleocapsid protein interacting with non-structural protein 3 in SARS-CoV-2.
Commun Biol, 6, 2023
3QEE
DownloadVisualize
BU of 3qee by Molmil
The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases
Descriptor: ACETATE ION, Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N, ...
Authors:Cartmell, A, Mckee, L.S, Pena, M, Larsbrink, J, Brumer, H, Lewis, R.J, Viks-Nielsen, A, Gilbert, H.J, Marles-Wright, J.
Deposit date:2011-01-20
Release date:2011-02-16
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:The Structure and Function of an Arabinan-specific {alpha}-1,2-Arabinofuranosidase Identified from Screening the Activities of Bacterial GH43 Glycoside Hydrolases.
J.Biol.Chem., 286, 2011
2MHK
DownloadVisualize
BU of 2mhk by Molmil
E. coli LpoA N-terminal domain
Descriptor: Penicillin-binding protein activator LpoA
Authors:Jean, N.L, Bougault, C, Lodge, A, Derouaux, A, Callens, G, Egan, A, Lewis, R.J, Vollmer, W, Simorre, J.
Deposit date:2013-11-26
Release date:2014-06-25
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Elongated Structure of the Outer-Membrane Activator of Peptidoglycan Synthesis LpoA: Implications for PBP1A Stimulation.
Structure, 22, 2014
5FM3
DownloadVisualize
BU of 5fm3 by Molmil
Crystal structure of hyper-phosphorylated RET kinase domain with (proximal) juxtamembrane segment
Descriptor: 1-TER-BUTYL-3-P-TOLYL-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-YLAMINE, PROTO-ONCOGENE TYROSINE-PROTEIN KINASE RECEPTOR RET
Authors:Plaza-Menacho, I, Barnouin, K, Barry, R, Borg, A, Orme, M, Mouilleron, S, Martinez-Torres, R.J, Meier, P, McDonald, N.Q.
Deposit date:2015-10-30
Release date:2016-12-28
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:RET Functions as a Dual-Specificity Kinase that Requires Allosteric Inputs from Juxtamembrane Elements.
Cell Rep, 17, 2016
3QED
DownloadVisualize
BU of 3qed by Molmil
The structure and function of an arabinan-specific alpha-1,2-arabinofuranosidase identified from screening the activities of bacterial GH43 glycoside hydrolases
Descriptor: Beta-xylosidase/alpha-L-arabinfuranosidase, gly43N, CALCIUM ION, ...
Authors:Cartmell, A, Mckee, L.S, Pena, M, Larsbrink, J, Brumer, H, Lewis, R.J, Viks-Nielsen, A, Gilbert, H.J, Marles-Wright, J.
Deposit date:2011-01-20
Release date:2011-02-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The Structure and Function of an Arabinan-specific {alpha}-1,2-Arabinofuranosidase Identified from Screening the Activities of Bacterial GH43 Glycoside Hydrolases.
J.Biol.Chem., 286, 2011
3PLV
DownloadVisualize
BU of 3plv by Molmil
Structure of Hub-1 protein in complex with Snu66 peptide (HINDII)
Descriptor: 66 kDa U4/U6.U5 small nuclear ribonucleoprotein component, Ubiquitin-like modifier HUB1
Authors:Mishra, S.K, Ammon, T, Popowicz, G.M, Krajewski, M, Nagel, R.J, Ares, M, Holak, T.A, Jentsch, S.
Deposit date:2010-11-15
Release date:2011-06-01
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing.
Nature, 474, 2011
4JUK
DownloadVisualize
BU of 4juk by Molmil
Crystal structure of H5N1 influenza virus hemagglutinin, clade 2.3.2.1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, Hemagglutinin HA2, ...
Authors:DuBois, R.M, Zaraket, H, Reddivari, M, Coop, T, Heath, R.J, White, S.W, Russell, C.J.
Deposit date:2013-03-25
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7502 Å)
Cite:To be published
To be Published
4JUN
DownloadVisualize
BU of 4jun by Molmil
Crystal structure of H5N1 influenza virus hemagglutinin, clade 5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ...
Authors:DuBois, R.M, Zaraket, H, Reddivari, M, Coop, T, Heath, R.J, White, S.W, Russell, C.J.
Deposit date:2013-03-25
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3398 Å)
Cite:To be published
To be Published
4JUL
DownloadVisualize
BU of 4jul by Molmil
Crystal structure of H5N1 influenza virus hemagglutinin, clade 2.3.4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin HA1, ...
Authors:DuBois, R.M, Zaraket, H, Reddivari, M, Coop, T, Heath, R.J, White, S.W, Russell, C.J.
Deposit date:2013-03-25
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.7927 Å)
Cite:To be published
To be Published
1VZS
DownloadVisualize
BU of 1vzs by Molmil
Solution structure of subunit F6 from the peripheral stalk region of ATP synthase from bovine heart mitochondria
Descriptor: ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL PRECURSOR
Authors:Carbajo, R.J, Silvester, J.A, Runswick, M.J, Walker, J.E, Neuhaus, D.
Deposit date:2004-05-25
Release date:2004-09-02
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of Subunit F(6) from the Peripheral Stalk Region of ATP Synthase from Bovine Heart Mitochondria
J.Mol.Biol., 342, 2004
3PZV
DownloadVisualize
BU of 3pzv by Molmil
C2 crystal form of the endo-1,4-beta-glucanase from Bacillus subtilis 168
Descriptor: Endoglucanase
Authors:Santos, C.R, Paiva, J.H, Akao, P.K, Meza, A.N, Silva, J.C, Squina, F.M, Ward, R.J, Ruller, R, Murakami, M.T.
Deposit date:2010-12-14
Release date:2011-09-14
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.867 Å)
Cite:Dissecting structure-function-stability relationships of a thermostable GH5-CBM3 cellulase from Bacillus subtilis 168.
Biochem.J., 441, 2012
4K09
DownloadVisualize
BU of 4k09 by Molmil
Crystal structure of BbTX-II from Bothrops brazili venom
Descriptor: BbTX-II
Authors:Fernandes, C.A.H, Comparetti, E.J, Borges, R.J, Fontes, M.R.M.
Deposit date:2013-04-03
Release date:2013-11-20
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.107 Å)
Cite:Structural bases for a complete myotoxic mechanism: Crystal structures of two non-catalytic phospholipases A2-like from Bothrops brazili venom.
Biochim.Biophys.Acta, 1834, 2013
4K06
DownloadVisualize
BU of 4k06 by Molmil
Crystal structure of MTX-II from Bothrops brazili venom complexed with polyethylene glycol
Descriptor: 2-(2-(2-(2-(2-(2-ETHOXYETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHOXY)ETHANOL, 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, MTX-II, ...
Authors:Fernandes, C.A.H, Comparetti, E.J, Borges, R.J, Fontes, M.R.M.
Deposit date:2013-04-03
Release date:2013-11-13
Last modified:2013-11-27
Method:X-RAY DIFFRACTION (2.08 Å)
Cite:Structural bases for a complete myotoxic mechanism: Crystal structures of two non-catalytic phospholipases A2-like from Bothrops brazili venom.
Biochim.Biophys.Acta, 1834, 2013
5FJW
DownloadVisualize
BU of 5fjw by Molmil
Yeast delta-COP-I mu-homology domain complexed with Dsl1 WxWx(MSE) peptide
Descriptor: COATOMER SUBUNIT DELTA, PROTEIN TRANSPORT PROTEIN DSL1
Authors:Suckling, R.J, Evans, P.R, Owen, D.J.
Deposit date:2015-10-13
Release date:2015-11-11
Last modified:2016-04-06
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for the Binding of Tryptophan-Based Motifs by Delta-Cop.
Proc.Natl.Acad.Sci.USA, 112, 2015
5FQL
DownloadVisualize
BU of 5fql by Molmil
Insights into Hunter syndrome from the structure of iduronate-2- sulfatase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Demydchuk, M, Hill, C.H, Zhou, A, Bunkoczi, G, Stein, P.E, Marchesan, D, Deane, J.E, Read, R.J.
Deposit date:2015-12-11
Release date:2017-01-18
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Insights into Hunter syndrome from the structure of iduronate-2-sulfatase.
Nat Commun, 8, 2017
1W53
DownloadVisualize
BU of 1w53 by Molmil
Kinase recruitment domain of the stress phosphatase RsbU
Descriptor: GLYCEROL, PHOSPHOSERINE PHOSPHATASE RSBU, XENON
Authors:Delumeau, O, Dutta, S, Brigulla, M, Kuhnke, G, Hardwick, S.W, Voelker, U, Yudkin, M.D, Lewis, R.J.
Deposit date:2004-08-05
Release date:2004-08-05
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Functional and Structural Characterization of Rsbu, a Stress Signaling Protein Phosphatase 2C
J.Biol.Chem., 279, 2004
3V6O
DownloadVisualize
BU of 3v6o by Molmil
Leptin Receptor-antibody complex
Descriptor: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
Authors:Carpenter, B, Hemsworth, G.R, Ross, R.J, Artymiuk, P.J.
Deposit date:2011-12-20
Release date:2012-03-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure of the human obesity receptor leptin-binding domain reveals the mechanism of leptin antagonism by a monoclonal antibody.
Structure, 20, 2012
6V9B
DownloadVisualize
BU of 6v9b by Molmil
Co-crystal structure of the fluorogenic Mango-IV homodimer bound to TO1-Biotin
Descriptor: POTASSIUM ION, RNA (28-MER), ~{N}-methyl-2-[2-[(~{E})-(1-methylquinolin-4-ylidene)methyl]-1,3-benzothiazol-3-yl]ethanamide
Authors:Trachman, R.J, Ferre-D'Amare, A.R.
Deposit date:2019-12-13
Release date:2020-05-20
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure-Guided Engineering of the Homodimeric Mango-IV Fluorescence Turn-on Aptamer Yields an RNA FRET Pair.
Structure, 28, 2020

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon